ÉTUDE SUR LES PORCS DE RACE CONTRÔLÉS À LA FERME AU QUÉBEC. 1. SOURCES DE VARIATION

1988 ◽  
Vol 68 (4) ◽  
pp. 1051-1062 ◽  
Author(s):  
YVAN SAVOIE ◽  
FRANCIS MINVIELLE

Sources of variation for growth, for backfat and for a phenotypic index were studied in Quebec purebred Yorkshire, Landrace, Hampshire and Duroc pigs. A total of 94,161 records of backfat measures and of age and weight at the end of test, accumulated between 1977 and 1985, was used in this work. Weight at the end of test was found to be an important source of variation, so growth data were adjusted to 90 kg by linear regression (R2 between 31 and 52%). Gender, parity number, year-season, birth years of parents and herd were also significant factors. Therefore, they will be included as fixed effects in the mixed model to be used to evaluate heritabilities and genetic correlations. Key words: Pig, variation, environmental factors, home test

1988 ◽  
Vol 68 (4) ◽  
pp. 1063-1068 ◽  
Author(s):  
YVAN SAVOIE ◽  
FRANCIS MINVIELLE

Variance and covariance components were estimated from 94 161 observations of growth and backfat taken on purebred pigs born from 8561 sows and 1431 boars. The mixed model used had herd, year-season, parents' birth years, gender and parity number as fixed effects and sire and dam as random effects. Each breed, Yorkshire, Landrace, Hampshire and Duroc, was studied separately. Several statistical methods of estimation were used but resulting values of heritability were generally quite similar. Heritability of growth traits obtained from MIVQUEO (minimum variance quadratic unbiased estimation) was between 0.21 and 0.40, depending on the breed. Heritability of backfat depth was larger, from 0.49 to 0.77. Genetic correlation of daily gain and backfat varied between 0.08 and 0.56; it was between −0.09 and −0.56 for age at 90 kg and backfat. Corresponding phenotypic correlations were smaller in absolute value but had the same sign as genetic correlations. Key words: Pigs, heritabilities, correlations, backfat, growth, index


HortScience ◽  
1997 ◽  
Vol 32 (3) ◽  
pp. 490A-490
Author(s):  
Isabelle Babic ◽  
Alley E. Watada

Fresh-cut spinach has been shown to have a bacteriostatic effect on Listeria monocytogenes ATCC 19111 (Babic et al., 1997). A study was undertaken to determine if this effect is noted on other species of Listeria and to determine if the spinach or the natural microorganisms on the spinach was the cause of the bacteriostatic effect. Six species of Listeria was cultivated in pure tryptic soy broth, tryptic soy broth containing freeze-dried spinach powder, or broth containing mesophilic aerobic microorganisms (MAM) isolated from spinach powder. The cultures were incubated at 10°C for 6 days and growth measured daily. Growth data were analyzed as four factor general linear repeated measures mixed model with species, treatment, and day as the fixed effects. The fixed effects showed a significant interaction between treatment × day and day × species. Results indicated that both the spinach and MAM had an inhibitory effect on Listeria as noted by the maximum population at 6 days, which was 8.8 Log10 cfu/ml in control, 6.4 in spinach powder cultures, and 7.4 in mixed cultures (P < 0.05). Of the six Listeria species, three L. monocytogenes were affected similarly whereas the remaining three, particularly L. innocua, were affected differently. In conclusion, the bacteriostatic effect of fresh-cut spinach differs with Listeria species and the native microorganisms play a major role as competitors.


2021 ◽  
Author(s):  
Wondossen Ayalew ◽  
Destaw Worku

Abstract Background: In any genetic improvement program, multi-trait estimates of genetic parameters and breeding values of economically important traits are essential to facilitate total merit index selection objectives.Method: Data comprising 4,263 lactation records of 1,223 cows calved in the years between 1992 and 2017 were used to estimate genetic parameters and breeding values of lactation milk yield (LMY) and lactation length (LL) and fertility (age at first calving, AFC; calving interval, CI; and days open DO) traits. Preliminary analysis of fixed effects used in the mixed model analysis was tested for their significance using lm package of R software. C(o)variance components and resulting parameters were estimated by fitting single and multi-trait repeatability animal models using BLUPF90 software packages.Results: The heritability estimates of LMY and LL were 0.21±0.04 and 0.13±0.02, respectively. Heritabilities for AFC, CI, and DO were 0.53, 0.12, and 0.14±0.04, respectively. Repeatability estimates of production and fertility traits were low to moderate. The genetic correlation between LMY and LL was high (0.53) whilst, among fertility traits, the estimates were ranged from 0.09±0.03 (between AFC and CI) to 0.99±0.01 (between CI and DO). Genetic correlations of productive traits with fertility traits were ranged from -0.01 to 0.99. The phenotypic correlations between production and fertility traits ranged from 0.06±0.02 for LL and AFC to 0.43±0.02 for LL and DO. The genetic trends for LMY and LL were positive and genetically improved by 15.80 kg year−1 and 0.92 days year−1, respectively. Regarding fertility traits, favorable trends of -0.56 and -0.65 days year-1 were observed for CI and DO, respectively. However, unfavorable trends of 0.04 month year−1 were obtained for AFC.Conclusion: With this small herd size, the study highlighted that a high response to selection for LMY and AFC would be expected in this population. Furthermore, aggregate selection of both production and fertility traits should take into account their antagonistic genetic correlations in future improvement programs.


1984 ◽  
Vol 38 (3) ◽  
pp. 313-322 ◽  
Author(s):  
Karin Meyer

ABSTRACTA multivariate restricted maximum-likelihood procedure was used to estimate variance and covariance components between and within sires. This method, which considered all lactations simultaneously, accounted for the bias in later lactation records due to selection on dairy performance. Analysis was carried out for a mixed model with herd-year-seasons as fixed and sires as random effects, and fitting lactation length, calving age and month within season of calving as covariables. The data included 26 176 first, 19 978 second and 14 868 third lactation records for 679 test sires, and were analysed in 13 subsets. Additional records for proven sires, treated as fixed effects, were included to improve the data structure.Estimates for all components were higher in later than in earlier data sets, probably, to a large extent, because of a scale effect. Pooled estimates of heritabilities for lactations 1 to 3 were 0·28, 0·19 and 0·24 for milk yield, and 0·27, 0·21 and 0·25 for fat yield. Genetic correlations of 0·91, 0·91 and 0·95 for milk yield, and 0·91, 0·91 and 0·99 for fat yield, were found between lactations 1 and 2, 1 and 3, and 2 and 3, respectively. Results suggest that dairy performance in all lactations is almost identical genetically.


Proceedings ◽  
2020 ◽  
Vol 73 (1) ◽  
pp. 9
Author(s):  
Deise Aline Knob ◽  
André Thaler Neto ◽  
Helen Schweizer ◽  
Anna Weigand ◽  
Roberto Kappes ◽  
...  

Depending on the breed or crossbreed line, cows have to cope with a more or less severe negative energy balance during the period of high milk yields in early lactation, which can be detected by beta-hydroxybutyrate (BHBA) and non-esterified fatty acids (NEFAs) in blood. Preventing cows from undergoing a severe negative energy balance by breeding and/or feeding measures is likely to be supported by the public and may help to improve the sustainability of milk production. The aim was to compare BHBA and NEFA concentrations in the blood of Holstein and Simmental cows and their crosses during the prepartum period until the end of lactation. In total, 164 cows formed five genetic groups according to their theoretic proportion of Holstein and Simmental genes as follows: Holstein (100% Holstein; n = 9), R1-Hol (51–99% Holstein; n = 30), F1 crossbreds (50% Holstein, 50% Simmental; n = 17), R1-Sim (1–49% Holstein; n = 81) and Simmental (100% Simmental; n = 27). NEFA and BHBA were evaluated once a week between April 2018 and August 2019. A mixed model analysis with fixed effects breed, week (relative to calving), the interaction of breed and week, parity, calving year, calving season, milking season, and the repeated measure effect on cows was used. Holstein cows had higher NEFAs (0.196 ± 0.013 mmol/L), and Simmental cows had the lowest NEFA concentrations (0.147 ± 0.008 mmol/L, p = 0.03). R1-Sim, F1 and R1-Hol cows had intermediate values (0.166 ± 0.005, 0.165 ± 0.010, 0.162 ± 0.008 mmol/L; respectively). The highest NEFA value was found in the first week after calving (0.49 ± 0.013 mmol/L). BHBA did not differ among genetic groups (p = 0.1007). There was, however, an interaction between the genetic group and week (p = 0.03). While Simmental, R1-Sim and F1 cows had the highest BHBA value, the second week after calving (0.92 ± 0.07 and 1.05 ± 0.04, and 1.10 ± 0.10 mmol/L, respectively), R1-Hol and Holstein cows showed the BHBA peak at the fourth week after calving (1.16 ± 0.07 and 1.36 ± 0.12 mmol/L, respectively). Unexpectedly, Holstein cows had a high BHBA peak again at week 34 after calving (1.68 ± 0.21 mmol/L). The genetic composition of the cows affects NEFA and BHBA. Simmental and R1-Sim cows mobilize fewer body reserves after calving. Therefore, dairy cows with higher degrees of Simmental origin might be more sustainable in comparison with Holstein genetics in the present study.


2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 302-302
Author(s):  
Cara Cargo-Froom ◽  
Anna-Kate Shoveller ◽  
Daniel A Columbus ◽  
Chris Marinangeli ◽  
Elijah Kiarie ◽  
...  

Abstract Alternative forms of protein are an important focus in nutrition. This study sought to compare the effects of pelleting and extrusion on nutrient composition and protein quality measurements of Canadian pulses. Pulses used for the study included: 2 pea variety (Amarillo and dunn), lentils, chickpeas, and faba bean. Ingredients were ground through a 10/64” or a 2/64” screen to create a coarse and fine ground product, respectively. Both coarse and fine ground ingredients were pelleted at 60–65, 70–75, and 80–85 C0. Fine ground ingredients were extruded at three different temperatures (110, 130, 150 C0) and two moisture levels (18 and 22%). Samples were collected for all runs at the beginning, middle, and end of each run for both pelleted and extruded samples. Samples were analyzed for proximate analysis, amino acids including lysinoalanine, total and damaged starch, and total dietary fibre (including insoluble and soluble). Data were analyzed using a mixed model via proc glimmix in SAS, where ingredient, process, grind, temperature, and extrusion moisture were treated as fixed effects with different interactions selected based on model investigated. Crude protein content of whole pulses was highest in faba bean and lowest in the Amarillo pea, with faba bean protein content significantly higher than all other pulses, and lentil protein content significantly higher than Amarillo peas (P &lt; 0.05). All pelleting temperatures, nested within grind, significantly increased crude protein content of all pulses compared to whole pulses (P &lt; 0.05). All extrusion moistures significantly increased crude protein content of all pulses compared to whole pulses (P &lt; 0.05) and moisture/temperature interactions were significantly higher for all pulses compared to whole pulses (P &lt; 0.05). Amino acid comparisons produced similar significant results. This suggests that pelleting and extrusion processing can have a positive impact on protein content of pulses and protein quality measurements in pulses.


2021 ◽  
Vol 99 (Supplement_3) ◽  
pp. 337-338
Author(s):  
Heather L Acuff ◽  
Tara N Gaire ◽  
Tyler Doerksen ◽  
Andrea Lu ◽  
Michael P Hays ◽  
...  

Abstract This study aimed to evaluate the effect of Bacillus coagulans GBI-30, 6086 on the fecal microbiome of healthy adult dogs. Extruded diets containing graded levels of probiotic applied either to the base ration before extrusion or as a topical coating post-extrusion were randomly assigned to ten individually-housed Beagle dogs (7 castrated males, 3 spayed females) of similar age (5.75 ± 0.23 yr) and body weight (12.3 ± 1.5 kg) in a 5 x 5 replicated Latin square with 16-d adaptation and 5-d total fecal collection for each period. Five dietary treatments were formulated to deliver a dose of 0-, 6-, 7-, 8-, or 9-log10 CFU·dog-1·d-1. Fresh fecal samples (n=50) were analyzed by 16S rRNA gene pyrosequencing. Community diversity was evaluated in R (v4.0.3, R Core Team, 2019). Relative abundance data were analyzed using a mixed model (v9.4, SAS Institute, Inc., Cary, NC) with treatment and period as fixed effects and dog as a random effect. Results were considered significant at P &lt; 0.05. Predominant phyla were Firmicutes (mean 81.2% ± 5), Actinobacteria (mean 9.9% ± 4.4), Bacteroidetes (mean 4.5% ± 1.7), Proteobacteria (mean 1.3% ± 0.7), and Fusobacteria (mean 1.1% ± 0.6). No evidence of shifts in predominant phyla, class, family, or genus taxonomic levels were observed except for the Bacillus genus, which had a greater relative abundance (P = 0.0189) in the low probiotic coating and high probiotic coating treatment groups compared to the extruded probiotic group. Alpha-diversity indices (Richness, Chao1, ACE, Shannon, Simpson, Inverse Simpson, and Fisher) and beta-diversity metrics (principal coordinate analysis and multi-dimensional scaling) were similar for all treatments. This data indicates that supplementation with Bacillus coagulans GBI-30, 6086 at a dose of up to 9 log10 CFU·d-1 did not alter the overall diversity of the fecal microbiome of healthy adult dogs over a 21-d period.


1996 ◽  
Vol 1996 ◽  
pp. 18-18
Author(s):  
O.I. Southwood ◽  
S. Hoste ◽  
T.H. Short ◽  
A.J. Mileham ◽  
D. Cuthbert-Heavens

A significant relationship between the oestrogen receptor gene (ESR) and litter size has been detected in USA populations of Large White and a synthetic comprising 50% Meishan (Rothschild et al., 1995). Animals carrying two copies of the favourable allele (B) had an extra pig born per litter than those that did not have the allele. This paper reports on results observed in a UK 50% Meishan synthetic and four UK Large White lines.Litter size data from 50% Meishan synthetic (L93) full-sib females where more than one ESR genotype was segregating. Data were analysed using a mixed model with full relationships and including the fixed effects of season of farrowing, parity, ESR genotype (AA, AB or BB) and service type (AI or natural service). Heritiability and permanent environmental effects for litter size were assumed as 0.09 and 0.11, repectively. A total of 27 full-sib families were represented and included 62 sows and 139 litter records. Hypothesis testing used the option in PEST under a mixed model (Groeneveld et al., 1991).


Author(s):  
Ludmila Zavadilová ◽  
Eva Kašná ◽  
Zuzana Krupová

Genomic breeding values (GEBV) were predicted for claw diseases/disorders in Holstein cows. The data sets included 6,498, 6,641 and 16,208 cows for the three groups of analysed disorders. The analysed traits were infectious diseases (ID), including digital and interdigital dermatitis and interdigital phlegmon, and non-infectious diseases (NID), including ulcers, white line disease, horn fissures, and double sole and overall claw disease (OCD), comprising all recorded disorders. Claw diseases/disorders were defined as 0/1 occurrence per lactation. Linear animal models were employed for prediction of conventional breeding values (BV) and genomic breeding values (GEBV), including the random additive genetic effect of animal and the permanent environmental effect of cow and fixed effects of parity, herd, year and month of calving. Both high and intermediate weights (80% and 50%, respectively) of genomic information were employed for GEBV50 and GEBV80 prediction. The estimated heritability for ID was 3.47%, whereas that for NID 4.61% and for OCD was 2.29%. Approximate genetic correlations among claw diseases/disorders traits ranged from 19% (ID x NID) to 81% (NID x OCD). The correlations between predicted BV and GEBV50 (84–99%) were higher than those between BV and GEBV80 (70–98%). Reliability of breeding values was low for each claw disease/disorder (on average, 3.7 to 14.8%) and increased with the weight of genomic information employed.


2020 ◽  
Vol 98 (Supplement_4) ◽  
pp. 347-347
Author(s):  
Pourya Davoudi ◽  
Duy Ngoc Do ◽  
Guoyu Hu ◽  
Siavash Salek Ardestani ◽  
Younes Miar

Abstract Feed cost is the major input cost in the mink industry and thus improvement of feed efficiency through selection for high feed efficient mink is necessary for the mink farmers. The objective of this study was to estimate the heritability, phenotypic and genetic correlations for different feed efficiency measures, including final body weight (FBW), daily feed intake (DFI), average daily gain (ADG), feed conversion ratio (FCR) and residual feed intake (RFI). For this purpose, 1,088 American mink from the Canadian Center for Fur Animal Research at Dalhousie Faculty of Agriculture were recorded for daily feed intake and body weight from August 1 to November 14 in 2018 and 2019. The univariate models were used to test the significance of sex, birth year and color as fixed effects, and dam as a random effect. Genetic parameters were estimated via bivariate models using ASReml-R version 4. Estimates of heritabilities (±SE) were 0.41±0.10, 0.37±0.11, 0.33±0.14, 0.24±0.09 and 0.22±0.09 for FBW, DFI, ADG, FCR and RFI, respectively. The genetic correlation (±SE) was moderate to high between FCR and RFI (0.68±0.15) and between FCR and ADG (-0.86±0.06). In addition, RFI had low non-significant (P &gt; 0.05) genetic correlations with ADG (0.04 ± 0.26) and BW (0.16 ± 0.24) but significant (P &lt; 0.05) high genetic correlation with DFI (0.74 ± 0.11) indicating that selection for lower RFI will reduce feed intake without adverse effects on the animal size and growth rate. The results suggested that RFI can be implemented in genetic/genomic selection programs to reduce feed intake in the mink production system.


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