THE SENSITIVTY OF A TWO-TRAIT SELECTION INDEX TO CHANGES IN ECONOMIC WEIGHTS AND GENETIC PARAMETER ESTIMATES

1985 ◽  
Vol 65 (1) ◽  
pp. 21-29
Author(s):  
B. B. ALLAN ◽  
G. M. WEISS ◽  
H. T. FREDEEN
Keyword(s):  
Genetic Parameters ◽  
Selection Index ◽  
Genetic Parameter ◽  
Average Daily Gain ◽  
Economic Value ◽  
Parameter Estimates ◽  
Genetic Response ◽  
Feed Conversion ◽  
Component Trait ◽  
Economic Weights

Two-trait selection indexes comprising average daily gain (G) and adjusted average backfat depth (F) were constructed utilizing several permutations of economic and genetic parameters. In these permutations the ratio of economic weights employed (value per kg G: value per mm F) ranged from 5:1 to 75:1, the ratios of heritabilities (G:F) ranged from 0.625:1 to 1:1 and the genetic and phenotypic correlations ranged from zero to 0.25. The relative merits of these indexes were evaluated by comparing the expected genetic merit of progeny produced by the top 10% of the boars identified by each index as applied to a population of 590 boars station tested under the Canadian Record of Performance (ROP) system. Responses were estimated for each component trait (G,F), for feed conversion (FC) and the aggregate genetic response (G + F + FC) in standard deviation units. The net economic value of the aggregate genetic response was calculated as the sum of the values of the genetic responses for the individual traits weighted by their economic values. Variation in the economic and genetic parameters influenced the expected genetic response for the component traits but the aggregate response and its economic value varied little over the range of parameters employed. Indeed, an index constructed from estimates of the actual genetic, phenotypic and economic parameters gave net returns that were only $0.04 per hog greater than an index based on equal economic weights, equal heritabilities and zero correlations. This index, of course, is the simple phenotypic index which leads to the conclusion that results of selection based on a phenotypic index will be fully comparable to those of a highly sophisticated genotypic index. Key words: Selection index sensitivity to parameter variation, genotypic selection index, phenotypic selection index, effectiveness of index selection

Genetic parameter estimates for early growth traits in Naeini goat

2012 ◽  
Vol 52 (11) ◽  
pp. 1046 ◽  
Author(s):  
Hasan Baneh ◽  
Mojtaba Najafi ◽  
Ghodrat Rahimi
Keyword(s):  
Environmental Effects ◽  
Variance Components ◽  
Genetic Parameters ◽  
Growth Traits ◽  
Genetic Parameter ◽  
Average Daily Gain ◽  
Parameter Estimates ◽  
Estimate Variance ◽  
Daily Gain ◽  
Birth Type

The present study was carried out to estimate variance components for growth traits in Naeini goats. Bodyweight records were collected for two flocks under supervision of the Agriculture Organisation of the Esfahan province between 2000 and 2007. Investigated traits were birthweight (BW; n = 2483), weaning weight (WW; n = 1211) and average daily gain from birth to weaning (ADG; n = 1211). Environmental effects were investigated using fixed-effect models, while (co)variance components and genetic parameters were estimated with single- and three-trait analyses using REML methods and WOMBAT software. Six different animal models were fitted to the traits, with the best model for each trait determined by log-likelihood ratio tests (LRT). All traits were significantly influenced by herd, birth year, sex of the kid, birth type and dam age (P < 0.01). On the basis of LRT, maternal permanent environmental effects (c2) were significant for WW and ADG, while BW was affected only by direct genetic effects. Direct heritability estimates for BW, WW and ADG were 0.25 ± 0.05, 0.07 ± 0.06 and 0.21 ± 0.11, respectively. The estimate of c2 was 0.16 ± 0.06 for both WW and ADG. Estimates of genetic correlation for BW–ADG, BW–WW and ADG–WW were 0.49, 0.61 and 0.94, respectively. The estimated phenotypic correlations were positive and were between 0.03 (BW–ADG) and 0.95 (ADG–WW). These results indicate that selection can be used to improve growth traits in this goat breed.

scholarly journals STRAIN DIFFERENCES IN THE GENETIC PARAMETER ESTIMATES FOR GROWTH TRAITS IN MEAT-TYPE CHICKEN

2021 ◽  
Vol 23 (2) ◽  
pp. 103-106
Author(s):  
C. O. N. IKEOBI ◽  
S. O. PETERS
Keyword(s):  
Growth Traits ◽  
Genetic Parameter ◽  
Average Daily Gain ◽  
Genetic Correlations ◽  
Correlation Coefficients ◽  
Strain Differences ◽  
Phenotypic Correlation ◽  
Parameter Estimates ◽  
Feed Conversion ◽  
Meat Type

Data on live performance traits obtained from experiments involving two strains of meat-type chicken were analysed and used to estimate heritabilities of the traits and the -inter-character correlations. There were strain differences (P<0.05) for body weight of birds to 56 days of age, average daily gain, and daily feed intake per bird. Strain differences were not significant (P>0.05) for feed conversion ratio. Genetic correlations obtained between pairs of characters were generally high (P<0.01). Coefficients of phenotypic correlation were slightly lower relative to those of the genetic correlation. Environmental correlation coefficients were moderate to high (0.36 to 0.99) and also significant (P<0.01) within strains. Correlation of feed conversion rate with other characters wert negative for the two strains, Heritability estimates for the growth traits wa very high, and no appreciable differences were observed between the strains.

scholarly journals  Reduction of traits for genetic evaluation of linear described traits in the Old Kladruber horse

2012 ◽  
Vol 57 (No. 4) ◽  
pp. 160-170 ◽  
Author(s):  
L. Vostrý ◽  
J. Přibyl ◽  
P. Šimeček
Keyword(s):  
Genetic Similarity ◽  
Genetic Parameters ◽  
Selection Index ◽  
Genetic Parameter ◽  
Genetic Correlations ◽  
Principal Component ◽  
Parameter Estimates ◽  
Selection Indexes ◽  
Measure Of Uncertainty ◽  
Selection Of

The estimated genetic parameters were used for selection of important conformation traits and reduction in the number of the described characteristics. For reduction in the number of described traits from the original 36 to 24, the traits were selected according to: measure of genetic similarity (cluster analysis), measure of uncertainty multidimensional quantity, value of the variance of aggregate genotype, value of the variance of selection index and correlation of trait to the first principal component of the genetic matrix. Reduction in the number of the described traits was based on the value of heritability coefficient and genetic correlations matrix. The reliabilities of selection indexes were estimated between 0.41 and 0.53. Among the three multivariate analysis methods evaluated in this study, the variance of selection index had the highest reliabilities of selection indexes. The estimation of selection index variance which omitted traits with low heritability coefficient and high genetic correlation was the most suitable for the traits selection. This procedure would enable the breeders to reduce field costs (e.g. time, labour) required for obtaining the genetic parameter estimates necessary for a specific breeding programme. &nbsp;

scholarly journals Realized Sampling Variances of Estimates of Genetic Parameters and the Difference Between Genetic and Phenotypic Correlations

Genetics ◽  
1996 ◽  
Vol 143 (3) ◽  
pp. 1409-1416 ◽  
Author(s):  
Kenneth R Koots ◽  
John P Gibson
Keyword(s):  
Genetic Correlation ◽  
Genetic Parameters ◽  
Genetic Parameter ◽  
Genetic Correlations ◽  
Phenotypic Correlation ◽  
Parameter Estimates ◽  
Sampling Variance ◽  
Phenotypic Correlations ◽  
Genetic And Phenotypic Correlations ◽  
Heritability Estimates

Abstract A data set of 1572 heritability estimates and 1015 pairs of genetic and phenotypic correlation estimates, constructed from a survey of published beef cattle genetic parameter estimates, provided a rare opportunity to study realized sampling variances of genetic parameter estimates. The distribution of both heritability estimates and genetic correlation estimates, when plotted against estimated accuracy, was consistent with random error variance being some three times the sampling variance predicted from standard formulae. This result was consistent with the observation that the variance of estimates of heritabilities and genetic correlations between populations were about four times the predicted sampling variance, suggesting few real differences in genetic parameters between populations. Except where there was a strong biological or statistical expectation of a difference, there was little evidence for differences between genetic and phenotypic correlations for most trait combinations or for differences in genetic correlations between populations. These results suggest that, even for controlled populations, estimating genetic parameters specific to a given population is less useful than commonly believed. A serendipitous discovery was that, in the standard formula for theoretical standard error of a genetic correlation estimate, the heritabilities refer to the estimated values and not, as seems generally assumed, the true population values.

Genetic parameter estimates for feeding pattern and production traits in pigs

1997 ◽  
Vol 1997 ◽  
pp. 31-31
Author(s):  
A.D. Hall ◽  
W.G. Hill ◽  
P.R. Bampton ◽  
A.J. Webb
Keyword(s):  
Feed Intake ◽  
Genetic Parameters ◽  
Genetic Parameter ◽  
Feeding Pattern ◽  
Parameter Estimates ◽  
Group Housing ◽  
Production Traits ◽  
Production Environment ◽  
Feeding Patterns ◽  
Potential Benefits

Until recently, to enable accurate recording of feed intake, pigs were kept in individual pens. The advent of electronic feeders has allowed accurate records of feed intake and feeding patterns in group housing which is more similar to that found in the production environment. The objectives of this study were to estimate genetic parameters for these feeding pattern traits and their correlations with production traits to show potential benefits in selection.

scholarly journals Comparative performance of Landrace, Yorkshire and Duroc breeds of swine

2017 ◽  
Vol 42 (3) ◽  
pp. 147
Author(s):  
C. K. N. Zebua ◽  
M. Muladno ◽  
P. H. Siagian
Keyword(s):  
Body Weight ◽  
Selection Index ◽  
Average Daily Gain ◽  
Least Square ◽  
Analysis Of Covariance ◽  
Economic Traits ◽  
Feed Conversion ◽  
Comparative Performance ◽  
Feeding Management ◽  
Randomized Design

The objectives of this study was to analyze the comparative ability of animal genetic, using evaluation of production that has important economic traits including Landrace, Yorkshire, and Duroc breeds of swine. A total of 49 swine consist 15 boars and 34 gilts, with average body weight of 18.50-21.50kg were used in this research. All of samples were raised in the same pen and feeding management. This research used the experimental method of Completely Randomized Design involving three treatments of animal breeds including Landrace, Yorkshire, and Duroc breeds. The data were analyzed by using analysis of covariance procedur General Linier Model and Least Square Means test. Boars and gilts were analyzed in separated data. The result showed that the effect of breed was significantly associated for all traits, but not for boars feed intake. The overall, Yorkshire and Landrace performed better than Duroc for average daily gain, feed conversion ratio, selection index, and age at 90 kg body weight. However, Duroc boars and gilts had the thinnest backfat followed by Yorkshire and Landrace.

scholarly journals Genetic parameter estimates for important traits on the fifth generation in red tilapia in Vietnam

2021 ◽  
Vol 20 (1) ◽  
pp. 49-57
Author(s):  
Sang V. Nguyen
Keyword(s):  
Body Weight ◽  
Survival Rate ◽  
Genetic Parameters ◽  
Genetic Parameter ◽  
Genetic Correlations ◽  
Parameter Estimates ◽  
Environment Interaction ◽  
Body Colour ◽  
Red Tilapia ◽  
Gxe Interaction

Genetic parameters comprising heritability, genetic correlation and genotype by environment interaction (GxE) for growth survival rate and body colour at harvest were estimated on the 5th selective generation of red tilapia grown in two environments, freshwater and brackishwater ponds. A total of 116 full-half-sib families was produced as well as 4,432 and 3,811 tagged individuals were tested in freshwater and brackishwater ponds, respectively. Genetic parameters were estimated by ASReml 4.1 software. The heritability for body weight and survival rate was high while medium heritability for body colour in freshwater was observed. The heritability for those traits of red tilapia in brackishwater. Together with the figures in earlier publication on previous generations (G1 to G4) in the same selective population, the expected medium to high response acquires if selection is done for each trait. Genetic correlations among harvest body weight, survival rate and body colour are insignificantly different and ranging from -0.25 to 0.37 (P > 0.05). These results implied that selection on one trait do not influence on responses of the other traits. GxE interaction for body weight and body colour between two tested environments is mostly negligible with genetic correlations ranging from 0.63 - 0.80 while it is important for survival trait (rg = -0.17 ± 0.40).

Quantitative genetic studies on wool yellowing in Corriedale sheep. 1. Wool yellowing susceptibility and wool production traits—genetic parameter estimates

1998 ◽  
Vol 49 (8) ◽  
pp. 1195 ◽  
Author(s):  
M. V. Benavides ◽  
A. P. Maher ◽  
M. J. Young ◽  
P. R. Beatson ◽  
T. C. Reid
Keyword(s):  
Selection Index ◽  
Genetic Parameter ◽  
Genetic Correlations ◽  
Fibre Diameter ◽  
Parameter Estimates ◽  
Production Traits ◽  
Correlated Responses ◽  
Percentage Yield ◽  
Fleece Weight ◽  
Average Information

The potential for the reduction of wool yellowing susceptibility (YPC) in Corriedale sheep via selection was examined. The heritabilities of YPC and greasy fleece weight (GFW) and clean fleece weight (CFW), yield percentage (Yield), mean fibre diameter (MFD), and subjective greasy wool colour assessment (Visual), and phenotypic and genetic correlations among these traits were estimated from records on 1492 progeny of 53 sires of a Corriedale flock by using restricted maximum likelihood procedures using an average information algorithm. The heritability of YPC was 0·27 ± 0·06. Genetic correlations between YPC and GFW, CFW, Yield, MFD, and Visual were 0·20 ± 0·14, 0·11 ± 0·14, –0·15 ± 0·13, 0·24 ± 0·14, and 0·95 ± 0·06, respectively. Phenotypic correlations were low between these traits and YPC. Visual had a heritability of 0·30 ± 0·06 and medium-high genetic correlations with all traits, except CFW. Heritability estimates of GFW, CFW, Yield, and MFD were 0·55 ± 0·07, 0·52 ± 0·07, 0·51 ± 0·07, and 0·52 ± 0·07, respectively. The expected correlated responses to selection against YPC are likely to cause reductions in CFW and MFD. Correlated responses from the reduction of Visual are predicted to be greater for all production traits than those from the reduction of YPC. Responses in YPC are predicted to be slightly higher when selection is on Visual (–0·21 score/year) than when selection is on YPC itself (–0·19 score/year). A selection index, including CFW, MFD, and YPC as aggregate breeding and breeding objective traits, calculated at I = +3·26CFW – 0·14MFD + 0·03YPC, predicted a YPC increase, worsening the problem.

Quantitative genetic studies on wool yellowing in Corriedale sheep. II. Clean wool colour and wool production traits: genetic parameter estimates and economic returns

2000 ◽  
Vol 51 (2) ◽  
pp. 191
Author(s):  
M. V. Benavides ◽  
A. P. Maher
Keyword(s):  
Selection Criteria ◽  
Selection Index ◽  
Genetic Parameter ◽  
Genetic Correlations ◽  
Fibre Diameter ◽  
Economic Losses ◽  
Direct Selection ◽  
Parameter Estimates ◽  
Selection Indices ◽  
Visual Colour

The potential for improvement of clean wool colour (CWC) in Corriedale sheep via selection was examined. The heritability, and phenotypic and genetic correlations, of CWC, brightness (Y), greasy (GFW) and clean (CFW) fleece weights , yield percentage (Yield), mean fibre diameter (MFD), and visual colour score were estimated from 440 progeny of 19 sires of a Corriedale flock using restricted maximum likelihood (REML) procedures with average information algorithm (AIREML). The heritability of CWC was estimated at 0.27±0.13. Clean wool colour showed strong positive genetic correlations with CFW and MFD. Visual colour score and CWC were also positively genetically correlated. As expected, direct selection criteria against MFD, CWC, or visual colour score would reduce CWC; however, direct selection against MFD would improve clean wool colour with negligible reductions on CFW, thus resulting in small economic gains. Several selection indices were calculated having either CFW, MFD, and CWC or CFW and MFD as selection criteria. The b-values of an unrestricted index were estimated at I1 = + 1.15 CFW + 0.13 MFD + 0.43 CWC, with positive correlated responses for all 3 breeding objective traits (CFW, MFD, and CWC). A second index, where CFW was restricted to nil genetic change, was estimated at: I2 = + 0.14 CFW − 0.02 MFD + 0.01 CWC. This index was expected to cause a negligible genetic gain for CWC (−0.04 Y–Z units/head.year). To avoid economic losses with the reduction on CFW, a third selection index was calculated where CWC was restricted to nil change. The index was estimated at I3 = +0.61 CFW − 0.07 MFD + 0.02 CWC with expected increases in CFW and decreases in MFD. Selection indices with (a) CFW and MFD (I4) and (b) CFW, MFD, and visual colour score (I5) as selection criteria would increase CFW, MFD, and CWC at the same rates observed in I1.

Genetic parameters for clinical mastitis in Holstein-Friesians in the United Kingdom: a Bayesian analysis

2001 ◽  
Vol 73 (2) ◽  
pp. 229-240 ◽  
Author(s):  
H. N. Kadarmideen ◽  
R. Rekaya ◽  
D. Gianola
Keyword(s):  
Genetic Parameters ◽  
Genetic Parameter ◽  
Mixed Linear Model ◽  
Clinical Mastitis ◽  
Parameter Estimates ◽  
Data Sets ◽  
Data Sampling ◽  
Environmental Variance ◽  
Data Set ◽  
Monte Carlo Techniques

AbstractA Bayesian threshold-liability model with Markov chain Monte Carlo techniques was used to infer genetic parameters for clinical mastitis records collected on Holstein-Friesian cows by one of the United Kingdom’s national recording schemes. Four data sets were created to investigate the effect of data sampling methods on genetic parameter estimates for first and multi-lactation cows, separately. The data sets were: (1) cows with complete first lactations only (8671 cows); (2) all cows, with first lactations whether complete or incomplete (10 967 cows); (3) cows with complete multi-lactations (32 948 records); and (4) all cows with multiple lactations whether complete or incomplete (44 268 records). A Gaussian mixed linear model with sire effects was adopted for liability. Explanatory variables included in the model varied for each data set. Analyses were conducted using Gibbs sampling and estimates were on the liability scale. Posterior means of heritability for clinical mastitis were higher for first lactations (0·11 and 0·10 for data sets 1 and 2, respectively) than for multiple lactations (0·09 and 0·07, for data sets 3 and 4, respectively). For multiple lactations, estimates of permanent environmental variance were higher for complete than incomplete lactations. Repeatability was 0·21 and 0·17 for data sets 3 and 4, respectively. This suggests the existence of effects, other than additive genetic effects, on susceptibility to mastitis that are common to all lactations. In first or multi-lactation data sets, heritability was proportionately 0·10 to 0·19 lower for data sets with all records (in which case the models had days in milk as a covariate) than for data with only complete lactation records (models without days in milk as a covariate). This suggests an effect of data sampling on genetic parameter estimates. The regression of liability on days in milk differed from zero, indicating that the probability of mastitis is higher for longer lactations, as expected. Results also indicated that a regression on days in milk should be included in a model for genetic evaluation of sires for mastitis resistance based on records in progress.

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