Association of a single nucleotide polymorphism in the bovine leptin gene with feed intake, feed efficiency, growth, feeding behaviour, carcass quality and body composition

2004 ◽  
Vol 84 (2) ◽  
pp. 211-219 ◽  
Author(s):  
J. D. Nkrumah ◽  
C. Li ◽  
J. B. Basarab ◽  
S. Guercio ◽  
Y. Meng ◽  
...  

Leptin is a 16-kDa-hormone product of the obese gene synthesized and expressed predominantly by adipose tissues, which has been shown to play major roles in the regulation of body weight, feed intake, energy balance, fertility, and immune system functions. We report an investigation into the association of a previously identified cytosine to thymine missense mutation in exon 2 of the bovine leptin gene with feed intake, feed efficiency, growth, feeding behaviour, carcass quality and body composition in five genetic selection lines of a commercial population of beef cattle. Differences among genotypes in growth, feed intake and feed efficiency were not significant (P > 0.10) though steers homozygous for the thymine allele had positive residual feed intake (i.e., consumed more feed than expected) (+ 0.19 kg d-1) whilst steers homozygous for the cytosine allele had negative residual feed intake (-0.18 kg d-1). Steers carrying the thymine allele had a higher rate of gain in ultrasound backfat (P = 0.02), ultrasound backfat thickness (P = 0. 06), higher carcass grade fat (backfat) (P = 0.005), lower yield grade (P = 0.01) and lower lean meat yield (P = 0.007). The thymine allele also tended to be associated with higher loin subcutaneous fat (P = 0.07) and was associated with higher brisket subcutaneous fat (P = 0.01), and brisket body cavity fat (P = 0.0001). No associations were found among the different genotypes and real-time ultrasound marbling, ultrasound longissimus thoracis area, carcass marbling and carcass longissimus thoracis area (P > 0.10). Our results show that animals carrying the thymine allele versus the cytosine allele may produce carcasses with poorer grades and lower lean meat yields but do not differ in carcass marbling or other fat depots. Key words: Beef cattle, leptin, feed intake, carcass merit

2019 ◽  
Vol 97 (5) ◽  
pp. 2181-2187
Author(s):  
Ahmed A Elolimy ◽  
Emad Abdel-Hamied ◽  
Liangyu Hu ◽  
Joshua C McCann ◽  
Daniel W Shike ◽  
...  

Abstract Residual feed intake (RFI) is a widely used measure of feed efficiency in cattle. Although the precise biologic mechanisms associated with improved feed efficiency are not well-known, most-efficient steers (i.e., with low RFI coefficient) downregulate abundance of proteins controlling protein degradation in skeletal muscle. Whether cellular mechanisms controlling protein turnover in ruminal tissue differ by RFI classification is unknown. The aim was to investigate associations between RFI and signaling through the mechanistic target of rapamycin (MTOR) and ubiquitin-proteasome pathways in ruminal epithelium. One hundred and forty-nine Red Angus cattle were allocated to 3 contemporary groups according to sex and herd origin. Animals were offered a finishing diet for 70 d to calculate the RFI coefficient for each. Within each group, the 2 most-efficient (n = 6) and least-efficient animals (n = 6) were selected. Compared with least-efficient animals, the most-efficient animals consumed less feed (P < 0.05; 18.36 vs. 23.39 kg/d DMI). At day 70, plasma samples were collected for insulin concentration analysis. Ruminal epithelium was collected immediately after slaughter to determine abundance and phosphorylation status of 29 proteins associated with MTOR, ubiquitin-proteasome, insulin signaling, and glucose and amino acid transport. Among the proteins involved in cellular protein synthesis, most-efficient animals had lower (P ≤ 0.05) abundance of MTOR, p-MTOR, RPS6KB1, EIF2A, EEF2K, AKT1, and RPS6KB1, whereas MAPK3 tended (P = 0.07) to be lower. In contrast, abundance of p-EEF2K, p-EEF2K:EEF2K, and p-EIF2A:EIF2A in most-efficient animals was greater (P ≤ 0.05). Among proteins catalyzing steps required for protein degradation, the abundance of UBA1, NEDD4, and STUB1 was lower (P ≤ 0.05) and MDM2 tended (P = 0.06) to be lower in most-efficient cattle. Plasma insulin and ruminal epithelium insulin signaling proteins did not differ (P > 0.05) between RFI groups. However, abundance of the insulin-responsive glucose transporter SLC2A4 and the amino acid transporters SLC1A3 and SLC1A5 also was lower (P ≤ 0.05) in most-efficient cattle. Overall, the data indicate that differences in signaling mechanisms controlling protein turnover and nutrient transport in ruminal epithelium are components of feed efficiency in beef cattle.


2004 ◽  
Vol 84 (2) ◽  
pp. 177-185 ◽  
Author(s):  
F. S. Schenkel ◽  
S. P. Miller ◽  
J. W. Wilton

Genetic associations between feed efficiency, growth, and live ultrasound measured body composition traits were studied in purebred beef bulls of six breeds in Ontario bull test stations from 1991 to 2000. Feed traits included average daily feed intake (FI), feed conversion ratio (FCR), and residual feed intake [feed intake adjusted for production alone (RFIp) or production and backfat thickness (RFIb)]. Growth traits were average daily weight gain (ADG), mid-test metabolic weight (MW), hip height (HH), and scrotal circumference (SC). Body composition traits included ultrasound backfat thickness (BF), longissimus muscle area (LMA), and predicted percentage of intramuscular fat (IFAT). Bulls were measured every 28 d for weight and individual feed intake, and at the end of test for ultrasound body composition traits. Number of records per trait ranged from 2284 (FI) to 13 319 (ADG). Fixed effects of test group, breed and end of test age (within breed), and random effects of animal and herd of origin were modeled using REML bivariate analyses for all traits. Heritability estimates were moderate for all traits (0.30 to 0.55), except for IFAT (0.14). The genetic correlation between RFIp and RFIb was high (0.99) within breeds, but breeds ranked differently with respect to RFIp and RFIb. Genetic correlations of RFIb with ADG and backfat thickness were essentially zero, which indicate that selection on residual feed intake could be implemented to reduce feed intake and improve feed conversion without compromising growth or changing levels of subcutaneous fat. Key words: Central test, genetic correlation, heritability, residual feed intake


2008 ◽  
Vol 48 (7) ◽  
pp. 843 ◽  
Author(s):  
Robin Dobos ◽  
Robert Herd

Spectral analysis was used to quantify differences in feeding patterns of Angus steers genetically divergent in residual feed intake (RFI). Forty-two low RFI (more efficient) and 28 high RFI (less efficient) selection line steers were fed a feedlot diet through electronic feeders for 72 days. Mean (±s.e.) daily feed intake was 11.9 ± 0.076 and 12.7 ± 0.095 kg dry matter/day over the 72-day feeding period for low and high RFI steers, respectively. The high RFI steers exhibited different temporal cycles to the low RFI steers in daily feed intake and time spent feeding. However, patterns of number of eating sessions, feeding rate, the time spent eating and the number of eating sessions were similar. Further analysis of daily (24 h) feeding behaviour is required to help improve our understanding of the association between feeding behaviour and feed efficiency.


2019 ◽  
Vol 32 (1) ◽  
pp. 14-20
Author(s):  
Estela Garza-Brenner ◽  
Ana M Sifuentes-Rincón ◽  
Felipe A Rodríguez Almeida ◽  
Ronald D Randel ◽  
G Manuel Parra-Bracamonte ◽  
...  

Background: The search for gene and marker effects on economically important traits is aimed not only to understanding the genetic architecture of complex traits but also to applying the information to breeding schemes. Objective: To analyze the effect of two temperament-related SNPs (rs109576799 located in the DRD3 gene, and rs43696138 in the HTR2A gene) on feeding performance of Mexican beef cattle. Methods: One hundred and thirty-six young beef bulls were included in a centralized feed efficiency performance test based on residual feed intake (RFI), with 20 d for adaptation and 70 d of feed efficiency testing. In addition to feeding traits, temperament was assessed at the beginning of the trial using pen score (PS) and exit velocity (EV). All animals were genotyped with two markers located in the HTR2A and DRD3 genes, and an association analysis was conducted between these genotypes and the measured traits. Results: For Brangus breed, a significant association was obtained between average daily gain (ADG; p=0.019), and the rs43696138 marker, resulting in higher gains for homozygous genotype GG (1.69 ± 0.04 kg), when compared to the heterozygous genotype GA (1.54 ± 0.04 kg). Conclusion: The previously reported association of these markers with temperament was not confirmed in the evaluated breeds; however, the rs43696138 marker showed an effect on a feeding performance trait. Further studies are needed to determine the effect of this and other markers on both RFI and temperament.Keywords: beef cattle, feed efficiency, residual feed intake, single nucleotide polymorphism, temperament.  Resumen Antecedentes: La búsqueda de efectos genéticos y marcadores de rasgos económicamente relevantes no solo se basa en el interés biológico de comprender la arquitectura genética de rasgos complejos, sino también en aplicar la información en los esquemas prácticos de mejoramiento. Objetivo: Analizar el efecto de dos SNPs relacionados con el temperamento (rs109576799 localizado en el gen DRD3, y rs43696138 localizado en el gen HTR2A) sobre la eficiencia alimenticia en el ganado bovino mexicano. Métodos: Ciento treinta y seis toretes de carne jóvenes fueron sometidos a una prueba de comportamiento alimenticio basada en el consumo residual de alimento (RFI), con 20 d de adaptación y 70 d de prueba para la eficiencia alimenticia. Además de los rasgos de comportamiento alimenticio, se evaluó el temperamento de los animales al inicio de la prueba, mediante la evaluación de comportamiento en el corral (PS), y la velocidad de salida (EV). Todas las muestras se tipificaron con dos marcadores localizados en los genes DRD3 y HTR2A para posteriormente realizar un análisis de asociación de los genotipos con los rasgos evaluados. Resultados: En la raza Brangus, se observó una asociación significativa de la media de ganancia diaria de peso (ADG, p=0,019) con el marcador rs43696138, localizado en el gen HTR2A, resultando en mayores ganancias para el genotipo GG (1,69 ± 0,04 kg) en comparación con los toros heterocigóticos GA (1,54 ± 0,04 kg). Conclusión: No se confirmó la asociación de estos marcadores previamente reportados con el temperamento en las razas evaluadas; sin embargo, el marcador rs43696138 mostró efecto en un rasgo de comportamiento alimenticio. Se necesitan más estudios para determinar el efecto de éste y otros marcadores en el consumo residual de alimento (RFI) y el temperamento.Palabras clave: consumo residual de alimento, eficiencia alimenticia, ganado de carne, polimorfismo de un solo nucleótido, temperamento.  Resumo Antecedentes: A busca de efeitos genéticos e marcadores de características economicamente relevantes não se baseia apenas no interesse biológico de compreender a arquitetura genética de traços complexos, mas também na aplicação da informação nos esquemas práticos de melhoria. Objetivo: Analisar o efeito de dois SNPs relacionados ao temperamento (rs109576799 localizado no gene DRD3 e rs43696138 localizado no gene HTR2A) sobre a eficiência nutricional no gado mexicano. Métodos: Cento e trinta e seis touros jovens foram submetidos a um teste de comportamento alimentar com base na entrada de alimentação residual (RFI), com 20 d de adaptação e 70 d de teste para eficiência de alimentação. Além dos traços de comportamento alimentar, o temperamento dos animais foi avaliado no início do teste, através da avaliação do comportamento na caneta (PS) e da velocidade de saída (EV). Todas as amostras foram digitadas com dois marcadores localizados nos genes DRD3 e HTR2A para posteriormente realizar uma análise de associação dos genótipos com os traços avaliados. Resultados: Na raça Brangus, observou-se uma associação significativa do ganho diário médio (ADG, p = 0,019) com o marcador rs43696138, localizado no gene HTR2A, resultando em maiores ganhos para o genótipo GG (1,69 ± 0,04 kg), em comparação com os touros heterozigóticos GA (1,54 ± 0,04 kg). Conclusão: A associação destes marcadores previamente relatados com o temperamento nas raças avaliadas não foi confirmada; no entanto, o marcador rs43696138 mostrou um efeito sobre uma característica de comportamento alimentar. Mais estudos são necessários para determinar o efeito deste e outros marcadores com ingestão alimentar residual (RFI) e temperamento.Palavras-chave: consumo residual de alimentos, eficiência alimentar, gado bovino, polimorfismo de nucleotídeo único, temperamento.


2012 ◽  
Vol 78 (14) ◽  
pp. 4949-4958 ◽  
Author(s):  
Ciara A. Carberry ◽  
David A. Kenny ◽  
Sukkyan Han ◽  
Matthew S. McCabe ◽  
Sinead M. Waters

ABSTRACTFeed-efficient animals have lower production costs and reduced environmental impact. Given that rumen microbial fermentation plays a pivotal role in host nutrition, the premise that rumen microbiota may contribute to host feed efficiency is gaining momentum. Since diet is a major factor in determining rumen community structure and fermentation patterns, we investigated the effect of divergence in phenotypic residual feed intake (RFI) on ruminal community structure of beef cattle across two contrasting diets. PCR-denaturing gradient gel electrophoresis (DGGE) and quantitative PCR (qPCR) were performed to profile the rumen bacterial population and to quantify the ruminal populations ofEntodiniumspp., protozoa,Fibrobacter succinogenes,Ruminococcus flavefaciens,Ruminococcus albus,Prevotella brevis, the genusPrevotella, and fungi in 14 low (efficient)- and 14 high (inefficient)-RFI animals offered a low-energy, high-forage diet, followed by a high-energy, low-forage diet. Canonical correspondence and Spearman correlation analyses were used to investigate associations between physiological variables and rumen microbial structure and specific microbial populations, respectively. The effect of RFI on bacterial profiles was influenced by diet, with the association between RFI group and PCR-DGGE profiles stronger for the higher forage diet. qPCR showed thatPrevotellaabundance was higher (P< 0.0001) in inefficient animals. A higher (P< 0.0001) abundance ofEntodiniumandPrevotellaspp. and a lower (P< 0.0001) abundance ofFibrobacter succinogeneswere observed when animals were offered the low-forage diet. Thus, differences in the ruminal microflora may contribute to host feed efficiency, although this effect may also be modulated by the diet offered.


2021 ◽  
Vol 12 ◽  
Author(s):  
Aidin Foroutan ◽  
David S. Wishart ◽  
Carolyn Fitzsimmons

Approximately 70% of the cost of beef production is impacted by dietary intake. Maximizing production efficiency of beef cattle requires not only genetic selection to maximize feed efficiency (i.e., residual feed intake (RFI)), but also adequate nutrition throughout all stages of growth and development to maximize efficiency of growth and reproductive capacity, even during gestation. RFI as a measure of feed efficiency in cattle has been recently accepted and used in the beef industry, but the effect of selection for RFI upon the dynamics of gestation has not been extensively studied, especially in the context of fluctuating energy supply to the dam and fetus. Nutrient restriction during gestation has been shown to negatively affect postnatal growth and development as well as fertility of beef cattle offspring. This, when combined with the genetic potential for RFI, may significantly affect energy partitioning in the offspring and subsequently important performance traits. In this review, we discuss: 1) the importance of RFI as a measure of feed efficiency and how it can affect other economic traits in beef cattle; 2) the influence of prenatal nutrition on physiological phenotypes in calves; 3) the benefits of investigating the interaction of genetic selection for RFI and prenatal nutrition; 4) how metabolomics, transcriptomics, and epigenomics have been employed to investigate the underlying biology associated with prenatal nutrition, RFI, or their interactions in beef cattle; and 5) how the integration of omics information is adding a level of deeper understanding of the genetic architecture of phenotypic traits in cattle.


2004 ◽  
Vol 44 (5) ◽  
pp. 423 ◽  
Author(s):  
R. M. Herd ◽  
V. H. Oddy ◽  
E. C. Richardson

There is a growing body of evidence that there is genetic variation in beef cattle feed intake relative to their liveweight and weight gain. Difference in feed intake, above and below that expected or predicted on the basis of size and growth, is measured as residual feed intake. Variation in residual feed intake must be underpinned by measurable differences in biological processes. This paper summarises some plausible mechanisms by which variation in efficiency of nutrient use may occur and presents several testable hypotheses for such variation. A� companion paper [Richardson and Herd (2004) Aust. J. Exp. Ag. 44, 431–441] presents results from experiments on cattle following divergent selection for residual feed intake. There were at least 5 major processes identified by which variation in efficiency can arise. These are associated with variation in intake of feed, digestion of feed, metabolism (anabolism and catabolism associated with and including variation in body composition), activity and thermoregulation. The percentage contribution of different mechanisms, to variation in residual feed intake, was: 9% for differences in heat increment of feeding; 14% for differences in digestion; 5% for differences in body composition; and 5% for differences in activity. Together, these mechanisms may be responsible for about one-third of the variation in residual feed intake. The remaining two-thirds were likely to be associated with heat loss due to variation in other processes, such as protein turnover and ion transport. There is no shortage of candidate mechanisms that, singularly or in combination, might contribute to genetic variation in energy utilisation in ruminants. Further research in beef cattle, to better define these mechanisms and enable their incorporation into breeding programmes, may lead not only to cattle which eat less for the same performance, but are superior in other traits as well.


2016 ◽  
Vol 96 (3) ◽  
pp. 448-455 ◽  
Author(s):  
Y. Mu ◽  
G. Vander Voort ◽  
M.K. Abo-Ismail ◽  
R. Ventura ◽  
J. Jamrozik ◽  
...  

With selection in beef cattle now incorporating feed efficiency, knowing the relationship with other traits is needed. Genetic relationships were estimated with an animal model in ASReml with a three-generation pedigree inclusive of 2882 animals. Multibreed data from two Ontario beef research farms with fertility traits were available on 1366 females and postweaning traits, including feed efficiency on 1297 individuals. Estimates of heritability for fertility traits were low to moderate ranging from 0.03 ± 0.01 for pregnancy rate to 0.21 ± 0.02 for gestation length, and postweaning traits were moderate to high with feed conversion ratio at 0.22 ± 0.06 to mid-metabolic weight at 0.89 ± 0.01. Both dry matter intake and mid-metabolic weight were genetically correlated with most fertility traits from −0.52 to 0.34. The genetic correlation between average daily gain and days to calving was moderately negative (–0.33 ± 0.16) as was residual feed intake with days to calving (–0.34 ± 0.17). Bigger cows with more feed intake and faster growth were more fertile, and residual feed intake had an unfavorable genetic correlation with days to calving, indicating that programs to select for feed efficiency should include fertility simultaneously in a selection index.


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