scholarly journals High Performance Human Face Recognition using Gabor Based Pseudo Hidden Markov Model

2013 ◽  
Vol 4 (1) ◽  
pp. 81-102 ◽  
Author(s):  
Arindam Kar ◽  
Debotosh Bhattacharjee ◽  
Mita Nasipuri ◽  
Dipak Kumar Basu ◽  
Mahantapas Kundu
Keyword(s):  
Face Recognition ◽  
Markov Model ◽  
Hidden Markov Model ◽  
High Performance ◽  
Hidden Markov ◽  
Gabor Wavelet ◽  
Data Set ◽  
Scanning Method ◽  
Face Images ◽  
Gabor Wavelet Transformation

This paper introduces a novel methodology that combines the multi-resolution feature of the Gabor wavelet transformation (GWT) with the local interactions of the facial structures expressed through the Pseudo Hidden Markov Model (PHMM). Unlike the traditional zigzag scanning method for feature extraction a continuous scanning method from top-left corner to right then top-down and right to left and so on until right-bottom of the image i.e., a spiral scanning technique has been proposed for better feature selection. Unlike traditional HMMs, the proposed PHMM does not perform the state conditional independence of the visible observation sequence assumption. This is achieved via the concept of local structures introduced by the PHMM used to extract facial bands and automatically select the most informative features of a face image. Thus, the long-range dependency problem inherent to traditional HMMs has been drastically reduced. Again with the use of most informative pixels rather than the whole image makes the proposed method reasonably faster for face recognition. This method has been successfully tested on frontal face images from the ORL, FRAV2D, and FERET face databases where the images vary in pose, illumination, expression, and scale. The FERET data set contains 2200 frontal face images of 200 subjects, while the FRAV2D data set consists of 1100 images of 100 subjects and the full ORL database is considered. The results reported in this application are far better than the recent and most referred systems.

scholarly journals Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach

PLoS ONE ◽  
2021 ◽  
Vol 16 (11) ◽  
pp. e0259670
Author(s):  
Albertas Dvirnas ◽  
Callum Stewart ◽  
Vilhelm Müller ◽  
Santosh Kumar Bikkarolla ◽  
Karolin Frykholm ◽  
...  
Keyword(s):  
Markov Model ◽  
Hidden Markov Model ◽  
Large Scale ◽  
Hidden Markov ◽  
Sequence Information ◽  
True Positive ◽  
Dna Barcodes ◽  
Structural Variations ◽  
Genomic Alterations ◽  
Data Set

Large-scale genomic alterations play an important role in disease, gene expression, and chromosome evolution. Optical DNA mapping (ODM), commonly categorized into sparsely-labelled ODM and densely-labelled ODM, provides sequence-specific continuous intensity profiles (DNA barcodes) along single DNA molecules and is a technique well-suited for detecting such alterations. For sparsely-labelled barcodes, the possibility to detect large genomic alterations has been investigated extensively, while densely-labelled barcodes have not received as much attention. In this work, we introduce HMMSV, a hidden Markov model (HMM) based algorithm for detecting structural variations (SVs) directly in densely-labelled barcodes without access to sequence information. We evaluate our approach using simulated data-sets with 5 different types of SVs, and combinations thereof, and demonstrate that the method reaches a true positive rate greater than 80% for randomly generated barcodes with single variations of size 25 kilobases (kb). Increasing the length of the SV further leads to larger true positive rates. For a real data-set with experimental barcodes on bacterial plasmids, we successfully detect matching barcode pairs and SVs without any particular assumption of the types of SVs present. Instead, our method effectively goes through all possible combinations of SVs. Since ODM works on length scales typically not reachable with other techniques, our methodology is a promising tool for identifying arbitrary combinations of genomic alterations.

scholarly journals Face Recognition Using Wavelet Coefficients and Hidden Markov Model

2003 ◽  
Vol 13 (6) ◽  
pp. 673-678 ◽  
Author(s):  
Kyung-Ah Lee ◽  
Dae-Jong Lee ◽  
Jang-Hwan Park ◽  
Myung-Geun Chun
Keyword(s):  
Face Recognition ◽  
Markov Model ◽  
Hidden Markov Model ◽  
Hidden Markov ◽  
Wavelet Coefficients

scholarly journals Estimation of Malaria Symptom Data Set using Hidden Markov Model

2019 ◽  
pp. 1-29
Author(s):  
Drinold Mbete ◽  
Kennedy Nyongesa ◽  
Joseph Rotich
Keyword(s):  
Markov Model ◽  
Hidden Markov Model ◽  
Hidden Markov ◽  
Disease Status ◽  
Clinic Visit ◽  
Reliable Prediction ◽  
Data Set ◽  
Susceptibility To Infection ◽  
Partially Observed ◽  
Intense Research

Clinical study of malaria presents a modeling challenge as patients disease status and progress is partially observed and assessed at discrete clinic visit times. Since patients initiate visits based on symptoms, intense research has focused on identication of reliable prediction for exposure, susceptibility to infection and development of severe malaria complications. Despite detailed literature on malaria infection and transmission, very little has been documented in the existing literature on malaria symptoms modeling, yet these symptoms are common. Furthermore, imperfect diagnostic tests may yield misclassication of observed symptoms. Place and Duration of Study: The main objective of this study is to develop a Bayesian Hidden Markov Model of Malaria symptoms in Masinde Muliro University of Science and Technology student population. An expression of Hidden Markov Model is developed and the parameters estimated through the forward-backward algorithm.

scholarly journals Increasing the Efficiency of Genome-wide Association Mapping via Hidden Markov Models

2016 ◽  
Author(s):  
Hong Gao ◽  
Hua Tang ◽  
Carlos Bustamante
Keyword(s):  
Markov Model ◽  
Hidden Markov Model ◽  
Large Scale ◽  
Hidden Markov ◽  
Association Studies ◽  
Genome Wide Association ◽  
Trend Test ◽  
Genome Wide Association Studies ◽  
Data Set ◽  
Genome Wide

With the rapid production of high dimensional genetic data, one major challenge in genome-wide association studies is to develop effective and efficient statistical tools to resolve the low power problem of detecting causal SNPs with low to moderate susceptibility, whose effects are often obscured by substantial background noises. Here we present a novel method that serves as an optimal technique for reducing background noises and improving detection power in genome-wide association studies. The approach uses hidden Markov model and its derivate Markov hidden Markov model to estimate the posterior probabilities of a markers being in an associated state. We conducted extensive simulations based on the human whole genome genotype data from the GlaxoSmithKline-POPRES project to calibrate the sensitivity and specificity of our method and compared with many popular approaches for detecting positive signals including the χ^2 test for association and the Cochran-Armitage trend test. Our simulation results suggested that at very low false positive rates (<10^-6), our method reaches the power of 0.9, and is more powerful than any other approaches, when the allelic effect of the causal variant is non-additive or unknown. Application of our method to the data set generated by Welcome Trust Case Control Consortium using 14,000 cases and 3,000 controls confirmed its powerfulness and efficiency under the context of the large-scale genome-wide association studies.

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