scholarly journals Native Valve Infective Endocarditis due to Staphylococcus lugdunensis Confirmed by 16S Ribosomal RNA Sequencing

2011 ◽  
Vol 43 (4) ◽  
pp. 372 ◽  
Author(s):  
Young Eun Ha ◽  
Seong-Yeol Ryu ◽  
Kwan Soo Ko ◽  
Eun-Jeong Joo ◽  
So Yeon Park ◽  
...  
Keyword(s):  
Infective Endocarditis ◽  
Rna Sequencing ◽  
Ribosomal Rna ◽  
16S Ribosomal Rna ◽  
Staphylococcus Lugdunensis ◽  
Native Valve

A comparison of culture vs 16S ribosomal RNA sequencing of chronic granulation tissue microbiota in cats and dogs

2018 ◽  
pp. 540-540
Author(s):  
Phil Franklin ◽  
Jane Ladlow ◽  
Xiaopei Su ◽  
Cinzia Cantacessi ◽  
Andrew Grant ◽  
...  
Keyword(s):  
Rna Sequencing ◽  
Ribosomal Rna ◽  
Granulation Tissue ◽  
16S Ribosomal Rna

scholarly journals Reading canonical and modified nucleobases in 16S ribosomal RNA using nanopore native RNA sequencing

PLoS ONE ◽  
2019 ◽  
Vol 14 (5) ◽  
pp. e0216709 ◽  
Author(s):  
Andrew M. Smith ◽  
Miten Jain ◽  
Logan Mulroney ◽  
Daniel R. Garalde ◽  
Mark Akeson
Keyword(s):  
Rna Sequencing ◽  
Ribosomal Rna ◽  
16S Ribosomal Rna ◽  
Modified Nucleobases

scholarly journals Mechanistic and Technical Challenges in Studying the Human Microbiome and Cancer Epidemiology

2016 ◽  
Vol 16 (2) ◽  
pp. 150-158 ◽  
Author(s):  
Mukesh Verma
Keyword(s):  
Rna Sequencing ◽  
Ribosomal Rna ◽  
Human Microbiome ◽  
Cancer Epidemiology ◽  
16S Ribosomal Rna ◽  
Cancer Risk Assessment ◽  
Sample Collection ◽  
Primer Selection ◽  
Technical Challenges ◽  
Epidemiology Studies

This article reviews the significance of the microbiome in cancer epidemiology, mechanistic and technical challenges in the field, and characterization of the microbiome in different tumor types to identify biomarkers of risk, progression, and prognosis. Publications on the microbiome and cancer epidemiology were reviewed to analyze sample collection and processing, microbiome taxa characterization by 16S ribosomal RNA sequencing, and microbiome metabolite characterization (metabotyping) by nuclear magnetic resonance and mass spectrometry. The analysis identified methodology types, research design, sample types, and issues in integrating data from different platforms. Aerodigestive cancer epidemiology studies conducted by different groups demonstrated the significance of microbiome information in developing approaches to improve health. Challenges exist in sample preparation and processing (eg, standardization of methods for collection and analysis). These challenges relate to technology, data integration from “omics” studies, inherent bias in primer selection during 16S ribosomal RNA sequencing, the need for large consortia with well-characterized biospecimens, cause and effect issues, resilience of microbiota to exposure events (requires longitudinal studies), and expanding studies for fungal and viral diversity (most studies used bacterial 16S ribosomal RNA sequencing for microbiota characterization). Despite these challenges, microbiome and cancer epidemiology studies are significant and may facilitate cancer risk assessment, diagnosis, and prognosis. In the future, clinical trials likely will use microbiota modifications to improve the efficacy of existing treatments.

Postoperative pyoderma gangrenosum: diagnostic value of 16s ribosomal RNA sequencing and review of the literature

2009 ◽  
Vol 34 (5) ◽  
pp. 598-602 ◽  
Author(s):  
C. Ferrandiz-Pulido ◽  
R. Bartralot ◽  
M. J. Fuente ◽  
C. Heras ◽  
P. Bassas ◽  
...  
Keyword(s):  
Rna Sequencing ◽  
Pyoderma Gangrenosum ◽  
Ribosomal Rna ◽  
Diagnostic Value ◽  
16S Ribosomal Rna ◽  
Review Of The Literature

scholarly journals Phylogenic homogeneity ofCoxiella burnetiistrains as determinated by 16S ribosomal RNA sequencing

1993 ◽  
Vol 113 (3) ◽  
pp. 339-344 ◽  
Author(s):  
A. Stein ◽  
N.A. Saunders ◽  
A.G. Taylor ◽  
D. Raoult
Keyword(s):  
Rna Sequencing ◽  
Ribosomal Rna ◽  
16S Ribosomal Rna
Sign in / Sign up

Export Citation Format

Share Document