scholarly journals Finding missing diversity from synonyms of Haplopteris (Pteridaceae)

PhytoKeys ◽  
2021 ◽  
Vol 178 ◽  
pp. 81-94
Author(s):  
Zuo-Ying Wei ◽  
Zeng-Qiang Xia ◽  
Xian-Chun Zhang ◽  
Jian-Guo Cao ◽  
Yue-Hong Yan
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Genetic Distance ◽  
Molecular Systematics ◽  
Microscopic Observation ◽  
Geographical Range ◽  
New Combination ◽  
Systematic Treatment ◽  
The Past ◽  
Molecular Phylogenetic

Although taxonomists target the remote wild regions to discover new species, taxa lacking a comprehensive and modern systematic treatment may be the new hotspot for biodiversity discovery. The development of molecular systematics integrated with microscopic observation techniques has greatly improved the ability of taxonomists to identify species correctly. Vittaria centrochinensis Ching ex J.F. Cheng, regarded as a synonym of Haplopteris fudzinoi (Makino) E.H.Crane, remained hidden from the eyes of fern taxonomists for more than 20 years. Herein, we collected several population samples of V. centrochinensis by performing molecular phylogenetic analysis of five cpDNA regions (rbcL, atpA, matK, ndhF, and trnL-trnF) and through micromophological observation of specimens which differs from H. fudzinoi by lamina width and exospores. Considering the differences in morphology, geographical range, and genetic distance between these two species, we formally recognized V. centrochinensis as an authentic species and proposed a new combination Haplopteris centrochinensis (Ching ex J.F.Cheng) Y.H.Yan, Z.Y.Wei & X.C.Zhang, comb. nov. Our findings demonstrate that several taxa in synonyms are missing, and nowadays taxonomy should also include re-evaluation of the past taxonomy.

Molecular phylogeny of the genus Rhabdosciadium (Apiaceae) with description of a new species R. anatolyi from Hakkâri province, eastern Turkey

Phytotaxa ◽  
2017 ◽  
Vol 331 (2) ◽  
pp. 253
Author(s):  
DMITRY LYSKOV ◽  
EUGENE KLJUYKOV ◽  
EBRU DOĞAN GÜNER ◽  
TAHIR SAMIGULLIN
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Molecular Phylogeny ◽  
Taxonomic Status ◽  
The Other ◽  
Monophyletic Group ◽  
Geographical Range ◽  
Eastern Turkey ◽  
Molecular Phylogenetic ◽  
A New Species

Six species of the genus Rhabdosciadium (Apiaceae) were studied by molecular phylogenetic analysis. The taxonomic status of each of them has been confirmed, the genus Rhabdosciadium turns out as a well-supported monophyletic group closely related to the genera Aegopodium, Caropodium, Carum, Falcaria, Fuernrohria, Gongylosciadium, Grammosciadium s.s., Hladnikia, Olymposciadium, etc. Rhabdosciadium anatolyi sp. nov. is described and illustrated as a new species from Hakkâri province, eastern Turkey. It differs from the other taxa of the genus, in addition to its unique geographical range, in the large terminal leaf lobes with regularly serrated margin, mainly ternate primary basal segments of leaves, and long internodes.

Revision of Hygrochilus (Orchidaceae: Epidendroideae: Aeridinae) and a molecular phylogenetic analysis

Phytotaxa ◽  
2014 ◽  
Vol 159 (4) ◽  
pp. 256 ◽  
Author(s):  
MING-HE LI ◽  
GUO-QIANG ZHANG ◽  
ZHONG-JIAN LIU ◽  
SI-REN LAN
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Maximum Likelihood ◽  
Bayesian Methods ◽  
New Combination ◽  
Molecular Phylogenetic Analysis ◽  
Molecular Phylogenetic ◽  
A New Species

Hygrochilus and Sedirea are genera of orchids with only three species endemic to Asia. An analysis of ITS and five plastid regions using parsimony, maximum likelihood, and Bayesian methods obtain clear evidence that Sedirea is nested within and should be considered synonymous with Hygrochilus. We adopt a broadly defined Hygrochilus characterized by possession of four pollinia. A new combination, namely, Hygrochilus japonica, and a new species, namely, Hygrochilus tsii (Orchidaceae: Epidedroideae: Aeridinae), are proposed.

Description of Hypocambala zizhongi sp. nov. and the new combination, Glyphiulus polytrichus (Golovatch et al., 2011) comb. nov., based on morphological and molecular data (Spirostreptida: Cambalidea: Cambalopsidae)

Zootaxa ◽  
2021 ◽  
Vol 4903 (3) ◽  
pp. 405-418
Author(s):  
XUAN-KONG JIANG ◽  
ZU-XU ZHANG ◽  
HUI-MING CHEN ◽  
ZHI-CAI XIE
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Molecular Data ◽  
New Combination ◽  
Molecular Phylogenetic Analysis ◽  
Molecular Phylogenetic ◽  
Morphological And Molecular Data ◽  
A New Species

The recent delimitation of the cambalopsid genera Hypocambala and Glyphiulus is debatable. The focus of controversy is whether the presence of crests on the trunk rings is an appropriate key character dividing these two genera. To address this issue, we conducted a molecular phylogenetic analysis including species with or without crests belonging to Hypocambala and species with crests belonging to Glyphiulus. The results of the phylogenetic analysis suggest that cambalopsids with crests are monophyletic and sister to a species without crests. Hypocambala polytricha, a cambalopsid with crests that is in a clade with crested Glyphiulus species, should be transferred to Glyphiulus. Therefore, a new combination is proposed, Glyphiulus polytrichus comb. nov. In addition, a discussion on the boundary between these two genera and a description of a new species, Hypocambala zizhongi sp. nov., are provided. 

scholarly journals Three new species and a new combination of Triblidium

MycoKeys ◽  
2019 ◽  
Vol 60 ◽  
pp. 1-15
Author(s):  
Tu Lv ◽  
Cheng-Lin Hou ◽  
Peter R. Johnston
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Dna Sequences ◽  
Morphological Study ◽  
Type Species ◽  
New Combination ◽  
Molecular Phylogenetic ◽  
Thin Walled ◽  
Three New Species ◽  
Small Clusters

Triblidiaceae (Rhytismatales) currently consists of two genera: Triblidium and Huangshania. Triblidium is the type genus and is characterised by melanized apothecia that occur scattered or in small clusters on the substratum, cleistohymenial (opening in the mesohymenial phase), inamyloid thin-walled asci and hyaline muriform ascospores. Before this study, only the type species, Triblidium caliciiforme, had DNA sequences in the NCBI GenBank. In this study, six specimens of Triblidium were collected from China and France and new ITS, mtSSU, LSU and RPB2 sequences were generated. Our molecular phylogenetic analysis and morphological study demonstrated three new species of Triblidium, which are formally described here: T. hubeiense, T. rostriforme and T. yunnanense. Additionally, our results indicated that Huangshania that was considered to be distinct from Triblidium because of its elongated, transversely-septate ascospores, is congeneric with Triblidium. Therefore, we have placed Huangshania in synonymy under Triblidium, rendering Triblidiaceae a monotypic family.

scholarly journals Black spicules from a new interstitial opheliid polychaete Thoracophelia minuta sp. nov. (Annelida: Opheliidae)

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Naoto Jimi ◽  
Shinta Fujimoto ◽  
Mami Takehara ◽  
Satoshi Imura
Keyword(s):  
Developmental Biology ◽  
Phylogenetic Analysis ◽  
New Species ◽  
Morphological Diversity ◽  
The Body ◽  
Evolutionary Significance ◽  
Research Subject ◽  
Ecological Diversity ◽  
Coelomic Cavity ◽  
Molecular Phylogenetic

AbstractThe phylum Annelida exhibits high morphological diversity coupled with its extensive ecological diversity, and the process of its evolution has been an attractive research subject for many researchers. Its representatives are also extensively studied in fields of ecology and developmental biology and important in many other biology related disciplines. The study of biomineralisation is one of them. Some annelid groups are well known to form calcified tubes but other forms of biomineralisation are also known. Herein, we report a new interstitial annelid species with black spicules, Thoracophelia minuta sp. nov., from Yoichi, Hokkaido, Japan. Spicules are minute calcium carbonate inclusions found across the body and in this new species, numerous black rod-like inclusions of calcium-rich composition are distributed in the coelomic cavity. The new species can be distinguished from other known species of the genus by these conspicuous spicules, shape of branchiae and body formula. Further, the new species’ body size is apparently smaller than its congeners. Based on our molecular phylogenetic analysis using 18S and 28S sequences, we discuss the evolutionary significance of the new species’ spicules and also the species' progenetic origin.

Pilaira australis sp. nov. (Mucorales, Mucoromycota) isolated from emu faeces in Australia

Phytotaxa ◽  
2017 ◽  
Vol 329 (3) ◽  
pp. 277 ◽  
Author(s):  
ANDREW S. URQUHART ◽  
PAULINE M. L. COULON ◽  
ALEXANDER IDNURM
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Species Identification ◽  
Internal Transcribed Spacers ◽  
Molecular Phylogenetic Analysis ◽  
Unique Combination ◽  
Dromaius Novaehollandiae ◽  
Molecular Phylogenetic ◽  
Carbon Utilisation ◽  
A New Species

Pilaira australis, a new species of fungus in the coprophilous genus Pilaira, was isolated from emu (Dromaius novaehollandiae) faeces and is described. Morphologically, the species resembles other species in the genus, particularly P. moreaui, except differs in its unique combination of sporangiophore height and sporangiospore length. Molecular phylogenetic analysis indicates that P. australis is distinct from other species in the genus with two regions, the internal transcribed spacers (ITS) and a fragment of the pyrG gene, showing 91% and 90% identity to the nearest species, respectively. Ultrastructure features and carbon utilisation were determined for P. australis, and may provide characteristics for species identification in this genus.

Codonopsis atriplicifolia (Campanulaceae), a new species from western Sichuan, China

Phytotaxa ◽  
2021 ◽  
Vol 512 (3) ◽  
Author(s):  
YU-YANG ZHOU ◽  
YUN-HAO SI ◽  
ZHEN ZHANG ◽  
QIANG WANG ◽  
YAN YU
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Chloroplast Dna ◽  
Molecular Phylogenetic Analysis ◽  
Dna Fragments ◽  
Western Sichuan ◽  
Molecular Phylogenetic ◽  
A New Species

Codonopsis atriplicifolia (Campanulaceae) from western Sichuan, China, is described here as a new species, which is similar to C. subscaposa in a number of characters. The results of molecular phylogenetic analysis of 25 species of Codonopsis based on chloroplast DNA fragments (matK, petD with petB-petD, rbcL) show that C. atriplicifolia is closely related to C. farreri. In morphology, the new species is distinctly different from the allied species by its linear-lanceolate leaves with subentire to pinnatipartite margins.

A new species of Scrophularia (Scrophulariaceae) from Hubei, China

Phytotaxa ◽  
2018 ◽  
Vol 350 (1) ◽  
pp. 1
Author(s):  
RUI-HONG WANG ◽  
MAO-QIN XIA ◽  
JIN-BO TAN ◽  
CHUAN CHEN ◽  
XIN-JIE JIN ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Species Delimitation ◽  
Morphological Characters ◽  
Central China ◽  
Molecular Phylogenetic Analysis ◽  
Leaf Margin ◽  
Close Relationship ◽  
Molecular Phylogenetic ◽  
A New Species

A new species, Scrophularia jinii (Scrophulariaceae), from Central China is described and illustrated. This new species was formerly misidentified as S. fargesii, from which it differs in many morphological characters. Moreover, it is distinct with all known Scrophularia species in its unique deeply double serrate leaf margin with 3–7 big teeth on each side. Molecular phylogenetic analysis further supports its species delimitation and suggests a close relationship with several Japanese and North American species.

Bursaphelenchus rufipennis n. sp. (Nematoda: Parasitaphelenchinae) and redescription of Ektaphelenchus obtusus (Nematoda: Ektaphelenchinae), associates from nematangia on the hind wings of Dendroctonus rufipennis (Coleoptera: Scolytidae)

Nematology ◽  
2008 ◽  
Vol 10 (6) ◽  
pp. 925-955 ◽  
Author(s):  
Natsumi Kanzaki ◽  
Robin M. Giblin-Davis ◽  
Yasmin J. Cardoza ◽  
Weimin Ye ◽  
Kenneth F. Raffa ◽  
...  
Keyword(s):  
New Species ◽  
Morphological Characters ◽  
Morphological Examination ◽  
Dendroctonus Rufipennis ◽  
Lateral Field ◽  
The Past ◽  
Female Tail ◽  
Molecular Phylogenetic ◽  
Voucher Specimens ◽  
Tail Tip

Abstract Two species of aphelench, Bursaphelenchus rufipennis n. sp. and Ektaphelenchus obtusus, were isolated from the 'nematangia', cocoon-like structures found at the base of the hind wings of Dendroctonus rufipennis. The nematangia contained adult females of E. obtusus and the dauer juveniles of B. rufipennis n. sp. Only B. rufipennis n. sp. could be cultured on Monilinia fructicola on LGPDA (lactic acid-treated, glycerol-supplemented, potato dextrose agar). The new species of Bursaphelenchus is described and figured and some additional morphological characters are ascribed to E. obtusus, E. josephi, E. sandiaensis, E. smaelus (= E. prolobos) and E. terebranus after examination of type and/or voucher specimens. Bursaphelenchus rufipennis n. sp. has an adult body length of ca 500-1000 μm, medium a ratios (ca 25-38 for females and ca 30-40 for males), b ratios of ca 8-13 (female) and 7-11 (male), c ratios of ca 15-22 (female and male), c′ ratios of ca 3-4 (female) and ca 2-3 (male), and is characterised by three incisures in the lateral field, mitten-shaped spicules and a conical female tail that curves ventrally and possesses a variable tail tip. The new species is morphologically closest to B. corneolus, B. curvicaudatus, B. gerberae, B. paracorneolus and B. talonus. Morphological examination of type and/or voucher specimens of five Ektaphelenchus species revealed coarse transverse body annulation and three pairs of male caudal papillae (except for the two species where males are not described). Clear typological differences were observed among these five Ektaphelenchus species in the structure of the lip region, presence/absence of stylet knobs and male spicule morphology. Although these characters have not been consistently documented in the past, they may be diagnostic for species in the genus. Molecular phylogenetic analysis based on SSU and D2/D3 LSU sequences revealed that B. rufipennis n. sp. was closest to B. paracorneolus and that E. obtusus was closest to species of Ektaphelenchoides and a Cryptaphelenchus sp.

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