scholarly journals Looking Back for the Future: Utilizing Sawfish Saws from Natural History Collections to Conserve the Critically Endangered Largetooth Sawfish (Pristis pristis)

2018 ◽  
Vol 2 ◽  
pp. e25806
Author(s):  
Annmarie Fearing ◽  
Kelcee Smith ◽  
Tonya Wiley ◽  
Jeff Whitty ◽  
Kevin Feldheim ◽  
...  

The Critically Endangered (International Union for Conservation of Nature) largetooth sawfish, Pristispristis, was historically distributed in the tropical Pacific, Atlantic and Indian Oceans. Today, ‘viable’ populations are largely limited to northern Australia. Populations that have suffered from drastic declines in abundance, such as those experienced by P.pristis, are typically at risk of having reduced, or low, levels of genetic diversity. Previous research found that P.pristis in Australia have experienced a genetic bottleneck, but it is unclear whether this bottleneck is the result of contemporary declines over the last century, or if it is the result of historic processes. A direct way to assess whether this genetic bottleneck occurred relatively recently is to compare levels of genetic diversity in contemporary and historic populations. Sawfish saws that were taken as trophies over the past century can now be found in natural history collections around the world and can provide DNA from past sawfish populations. We collected tissue samples from 150 dried P.pristis saws found in both private and public natural history collections. Because DNA from natural history specimens tends to be highly degraded, we targeted ten small DNA fragments, ~150 base pairs each, to amplify and sequence the entire mitochondrial control region. These data will provide important baseline information about P.pristis that can be used to quantify any loss of genetic diversity over the past ~100 years and assess their long-term survival potential. If the levels of genetic diversity in contemporary populations are severely reduced from those of past populations, protecting remaining genetic diversity within and between viable populations should be a priority in conservation plans.

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Surya Prasad Sharma ◽  
Mirza Ghazanfarullah Ghazi ◽  
Suyash Katdare ◽  
Niladri Dasgupta ◽  
Samrat Mondol ◽  
...  

AbstractThe gharial (Gavialis gangeticus) is a critically endangered crocodylian, endemic to the Indian subcontinent. The species has experienced severe population decline during the twentieth century owing to habitat loss, poaching, and mortalities in passive fishing. Its extant populations have largely recovered through translocation programmes initiated in 1975. Understanding the genetic status of these populations is crucial for evaluating the effectiveness of the ongoing conservation efforts. This study assessed the genetic diversity, population structure, and evidence of genetic bottlenecks of the two managed populations inhabiting the Chambal and Girwa Rivers, which hold nearly 80% of the global gharial populations. We used seven polymorphic nuclear microsatellite loci and a 520 bp partial fragment of the mitochondrial control region (CR). The overall mean allelic richness (Ar) was 2.80 ± 0.40, and the observed (Ho) and expected (He) heterozygosities were 0.40 ± 0.05 and 0.39 ± 0.05, respectively. We observed low levels of genetic differentiation between populations (FST = 0.039, P < 0.05; G’ST = 0.058, P < 0.05 Jost’s D = 0.016, P < 0.05). The bottleneck analysis using the M ratio (Chambal = 0.31 ± 0.06; Girwa = 0.41 ± 0.12) suggested the presence of a genetic bottleneck in both populations. The mitochondrial CR also showed a low level of variation, with two haplotypes observed in the Girwa population. This study highlights the low level of genetic diversity in the two largest managed gharial populations in the wild. Hence, it is recommended to assess the genetic status of extant wild and captive gharial populations for planning future translocation programmes to ensure long-term survival in the wild.


2018 ◽  
Vol 374 (1763) ◽  
pp. 20170405 ◽  
Author(s):  
Heather M. Kharouba ◽  
Jayme M. M. Lewthwaite ◽  
Rob Guralnick ◽  
Jeremy T. Kerr ◽  
Mark Vellend

Over the past two decades, natural history collections (NHCs) have played an increasingly prominent role in global change research, but they have still greater potential, especially for the most diverse group of animals on Earth: insects. Here, we review the role of NHCs in advancing our understanding of the ecological and evolutionary responses of insects to recent global changes. Insect NHCs have helped document changes in insects' geographical distributions, phenology, phenotypic and genotypic traits over time periods up to a century. Recent work demonstrates the enormous potential of NHCs data for examining insect responses at multiple temporal, spatial and phylogenetic scales. Moving forward, insect NHCs offer unique opportunities to examine the morphological, chemical and genomic information in each specimen, thus advancing our understanding of the processes underlying species’ ecological and evolutionary responses to rapid, widespread global changes. This article is part of the theme issue ‘Biological collections for understanding biodiversity in the anthropocene’.


Author(s):  
Emily W. B. Russell Southgate

This chapter introduces the use of historical documents and other forms of information that depend on written explanation, such as natural history collections and historical photographs. After a general explanation of the unique values of these data for establishing historical baselines and trajectories, it gives a brief introduction to the methods used to assess the validity of the sources, including consideration of various biases that are integral to written documents. These include a consideration of scale. The chapter then describes a variety of sources, including historical data, maps, photographs, government documents, and plant and animal collections, with examples of how each has been used to establish some condition or process in the past.


Author(s):  
JEFF A. JOHNSON ◽  
RUTH E. TINGAY ◽  
MELANIE CULVER ◽  
FRANK HAILER ◽  
MICHÈLE L. CLARKE ◽  
...  

2019 ◽  
Vol 9 (9) ◽  
pp. 5420-5432 ◽  
Author(s):  
Mark P. Miller ◽  
Julia T. Vilstrup ◽  
Thomas D. Mullins ◽  
Will McDearman ◽  
Jeffrey R. Walters ◽  
...  

2002 ◽  
Vol 1 (1) ◽  
pp. 77-80 ◽  
Author(s):  
Robert Page

C.A.R. Crosland (1956) The Future of Socialism, Jonathan Cape, London.Donald Sassoon (1997), One Hundred Years of Socialism, HarperCollins London. (First published by I.B.Tauris in 1996).John Callaghan (2000), The Retreat of Social Democracy, Manchester University Press, Manchester.Between them these three books provide an excellent overview of the theory and practice of social democracy as it has twisted and turned over the past century. As Sassoon reminds us in his magisterial review of the West European left, revisionism of one kind or another has been a constant feature of socialist discourse. The key question has always been whether such revisions have helped to bring about the transformation of capitalism (or, perhaps more realistically, its humanisation) or, in contrast, helped to secure its long-term survival. The first, and arguably the most controversial, revisionism of social democratic thought occurred in Germany at the end of the nineteenth century.


2021 ◽  
Author(s):  
Michael Greeff ◽  
Max Caspers ◽  
Vincent Kalkman ◽  
Luc Willemse ◽  
Barry Sunderland ◽  
...  

Natural history collections play a vital role in biodiversity research and conservation by providing a window to the past. The usefulness of the vast amount of historical data depends on their quality, with correct taxonomic identifications being the most critical. The identification of many of the objects of natural history collections, however, is wanting, doubtful or outdated. Providing correct identifications is difficult given the sheer number of objects and the scarcity of expertise. Here we outline the construction of an ecosystem for the collaborative development and exchange of image recognition algorithms designed to support the identification of objects. Such an ecosystem will facilitate sharing taxonomic expertise among institutions by offering image datasets that are correctly identified by their in-house taxonomic experts. Together with openly accessible machine learning algorithms and easy to use workbenches, this will allow other institutes to train image recognition algorithms and thereby compensate for the lacking expertise.


2000 ◽  
Vol 10 ◽  
pp. 43-50
Author(s):  
Warren D. Allmon ◽  
Meredith A. Lane

WITHIN BIOLOGY, the consummate synthetic, big-picture science is systematics and the fundamental resource and tool for systematics is natural history collections. Without systematics there is no unifying theme to the study of biology. Without natural history collections there is no systematics. Society and the institutions that house natural history collections must rediscover the value of those collections. These collections are a world treasure, a cultural heritage, an intellectual trust, a societal and institutional responsibility.Paleontology and paleontological collections contribute uniquely to the sciences of systematics and ecology. They provide the record of change through geological time evidence of the changes in the characteristics of species, changes in ecological associations of biota, and a record of abiotic global and regional climatic change. The study of this historical record allows the identification of the locations of certain sets of conditions from the past, illuminates our understanding of the present, and enables our prediction of future changes on a global scale.


2020 ◽  
Vol 6 ◽  
Author(s):  
Henry Väre ◽  
Leena Myllys ◽  
Risto Väinölä ◽  
Pasi Sihvonen ◽  
Anniina Kuusijärvi ◽  
...  

The herbarium collections are sub-collections of the Finnish Museum of Natural History Luomus that manages national natural history collections, as referred to in the Universities Act. The general collections policy defines the overall principles and guidelines concerning the collections practices. The sub-collections policies specify its guidelines and instructions, considering the special nature of the sub-collections. The policy for the botanical and mycological herbarium collections guides the activities related to all botanical, mycological and phycological collections in herbaria, hence excluding digital collections, DNA and tissue samples as well as living collections, which have separate policies. The herbarium collections policy defines and outlines the purpose of the collections as is to accrue and preserve natural specimens representing biodiversity for research and university-level teaching. The policy defines the objectives and content of related activities, the division of responsibilities for the administration and care of the collections within the organisation, and the general principles and practices for the acquisition, preservation, availability and use of the collections.


2021 ◽  
Vol 7 ◽  
Author(s):  
Gunilla Ståhls ◽  
Alexandre Aleixo ◽  
Marko-Tapio Hyvärinen ◽  
Anniina Kuusijärvi ◽  
Leena Myllys ◽  
...  

The Genomic Resources Collection is a separate, independently managed part of the natural history collections of the Finnish Museum of Natural History Luomus specifically intended for consumptive research. The GRC policy deals with the materials that are archived for the very purpose of enabling the study of biological diversity at the genome level, DNA extractions of animal, fungal and plant specimens, and animal tissue samples stored deep-frozen for purposes of future DNA extraction. The GRC policy defines the purpose of the collections, the objectives and content of the procedures and activities related to them, the distribution of responsibilities for collection management and maintenance in Luomus, and the principles of collection accumulation, preservation and accessibility. The aim of the GRC is to store and loan genomic samples for research purposes. In taxonomic coverage the collection overlaps with all the taxonomically delimited specimen collections managed by the Zoology and Botany Units, but is distinguished as being directed to preserve the genomic (DNA) information irrespective of the phenotypic variation that are the focus of specimen collections. The GRC includes both Finnish and foreign samples, all legally and ethically obtained, mostly linked to a specimen voucher in the taxonomic collections. The GRC samples are documented and trackable in Luomus collections management system. In accordance with the Universities Act, the GRC belongs to the national natural science collections of Luomus. For their part, the GRC collection implement the mission of Luomus, which is to be “responsible for the preservation, accumulation and exhibition of the national natural history collections and for research and education relating to them”.


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