scholarly journals Mendogia diffusa sp. nov. and an updated key to the species of Mendogia (Myriangiaceae, Dothideomycetes)

2021 ◽  
Vol 9 ◽  
Author(s):  
Vinodhini Thiyagaraja ◽  
Robert Lücking ◽  
Damien Ertz ◽  
Milan C. Samarakoon ◽  
Dhanushka N. Wanasinghe ◽  
...  
Keyword(s):  
Green Algae ◽  
Leaf Surface ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Tropical Regions ◽  
Algal Associations ◽  
The Status

Mendogia belongs to Dothideomycetes and its members are epiphytic on living bamboo culms or palms and distributed in tropical regions. Currently, the genus comprises seven species. Another collection resembling Mendogia was collected from the leaves of Fagales sp. in Thailand. Morphological characteristics and multilocus phylogenetic analyses, using ITS, LSU and SSU sequences, showed that the fungus is new to science, described herein as Mendogia diffusa. Mendogia diffusa is characterised by apothecial ascostromata, a carbonised epithecium, dark brown setae on the ascostromatal surface, hyaline paraphysoids, ovoid to clavate asci and oblong to elliptical, muriform ascospores. The fungus has a dark pigmented surface and is occasionally facultatively associated with patches of green algae, but not actually lichenised. Instead, the fungus penetrates the upper leaf surface, forming dark pigmented isodiametric cells below the epidermis. Re-examination of specimens of M. chiangraiensis, M. macrostroma and M. yunnanensis revealed the absence of algal associations. The status of Mendogia philippinensis (= M. calami) and M. bambusina (= Uleopeltis bambusina) was established, based on morphological comparisons and previous studies. Comprehensive morphological descriptions with phylogenetic analyses support M. diffusa as a novel species in Myriangiaceae. An updated key to the known species of the genus is also provided.

scholarly journals New Species of Tomentella (Thelephorales, Basidiomycota) from Temperate Continental Mountain Climate of China (Xinjiang Region)

Forests ◽  
2021 ◽  
Vol 12 (11) ◽  
pp. 1531
Author(s):  
Xu Lu ◽  
Haisheng Yuan
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Morphological Characteristics ◽  
Northwest China ◽  
Tropical Regions ◽  
Mountain Climate ◽  
Molecular Phylogenetic ◽  
Three New Species ◽  
Xinjiang Autonomous Region

Species in the genus Tomentella are distributed throughout the temperate and tropical regions worldwide, but few studies associated with the taxonomy and phylogeny of this genus had been reported from Northwest China. In this paper, molecular phylogenetic analyses of the nuclear ribosomal ITS (internal transcribed spacer: ITS1-5.8S-ITS2) and LSU (large subunit: 28S) sequences combined with morphological characteristics identified three new species from Xinjiang Autonomous Region in Northwest China, which were named T. aurantispora, T. kanasensis, and T. schrenkiana. Similar macromorphological and anatomical characteristics are shared by these new species: arachnoid basidiocarps; byssoid sterile margins; utriform basidia with a clamp connection at the base; the absence of rhizomorphs and cystidia; and slightly thick-walled, subglobose to globose basidiospores. Among these new species, the color of the hymenophoral surface, the size of the basidiospores, and some other features can be used for species delimitation. The new species and closely related species in the phylogenetic tree were discussed, and a key to the identified species of Tomentella from China was provided.

Additions to Ochroconis from India

Phytotaxa ◽  
2019 ◽  
Vol 427 (3) ◽  
pp. 186-199
Author(s):  
ARCHANA SINGH ◽  
NIKHIL KUMAR SINGH ◽  
PARAS NATH SINGH ◽  
RAGHVENDRA SINGH ◽  
NAWAL KISHORE DUBEY
Keyword(s):  
New Species ◽  
Medicinal Plant ◽  
Ribosomal Dna ◽  
Leaf Surface ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Nuclear Ribosomal Dna ◽  
Monophyletic Clade ◽  
Protein Coding

Ochroconis helicteris, a novel species of the oligotrophic genus Ochroconis (Sympoventuriaceae, Venturiales), has been described and illustrated. Morphologically, this species has characters similar to allied species in the genus Ochroconis, but differs in conidial dimensions and shape. Phylogenetic analyses using nuclear ribosomal DNA gene ITS and protein coding gene BT2 revealed it clustering as monophyletic clade which was separated from known Ochroconis species. New species was isolated from leaf surface of medicinal plant Helicteris isora L.

scholarly journals Two novel species and two new records of Distoseptispora from freshwater habitats in China and Thailand

MycoKeys ◽  
2021 ◽  
Vol 84 ◽  
pp. 79-101
Author(s):  
Hong-Wei Shen ◽  
Dan-Feng Bao ◽  
Kevin D. Hyde ◽  
Hong-Yan Su ◽  
Darbhe J. Bhat ◽  
...  
Keyword(s):  
New Records ◽  
Sequence Data ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Freshwater Fungi ◽  
Freshwater Habitat ◽  
Two New Species ◽  
Freshwater Habitats ◽  
Great Mekong Subregion

During investigations into freshwater fungi from the Great Mekong Subregion, four Distoseptispora taxa were collected from China and Thailand. Based on morphological characteristics, and phylogenetic analyses of combined LSU, ITS, SSU, TEF1-α, and RPB2 sequence data, two new species Distoseptispora bangkokensis and D. lancangjiangensis are introduced, and two known species D. clematidis and D. thysanolaenae were first reported in freshwater habitat. Illustrations and descriptions of these taxa are provided, along with comparisons with extant taxa in the genus.

Morpho-phylogenetic evidence reveals Lasiodiplodia chiangraiensis sp. nov. (Botryosphaeriaceae) associated with woody hosts in northern Thailand

Phytotaxa ◽  
2021 ◽  
Vol 508 (2) ◽  
Author(s):  
NA WU ◽  
ASHA J. DISSANAYAKE ◽  
K.W. THILINI CHETHANA ◽  
KEVIN D. HYDE ◽  
JIAN-KUI LIU
Keyword(s):  
New Species ◽  
Phylogenetic Tree ◽  
Sequence Data ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Molecular Data ◽  
Northern Thailand ◽  
Data Support ◽  
Distinct Lineage

Lasiodiplodia species are commonly as endophytes, saprobes and pathogens in tropics and subtropics. During an investigation of Botryosphaeriaceae in Thailand, two Lasiodiplodia taxa were isolated. Morphological characteristics and phylogenetic analyses based on combined ITS, tef and tub2 sequence data support the establishment of a novel species, Lasiodiplodia chiangraiensis, isolated from woody hosts. Lasiodiplodia chiangraiensis is phylogenetically close to L. iraniensis and L. thailandica, but represents a distinct lineage. The new species could be distinguished from extant Lasiodiplodia species by its mature conidial dimensions. A detailed description and illustration are provided, as well as an updated phylogenetic tree (ITS, tef and tub2) including all species (with available molecular data) of Lasiodiplodia. In addition, the accepted genera in Botryosphaeriaceae based on recent studies are given.

Neoerysiphe sechii (Ascomycota: Erysiphales): A new species of powdery mildew found on Sechium edule and Sechium mexicanum (Cucurbitaceae) in Mexico

Botany ◽  
2020 ◽  
Vol 98 (4) ◽  
pp. 185-195 ◽  
Author(s):  
R. Gregorio-Cipriano ◽  
D. González ◽  
R. Félix-Gastélum ◽  
S. Chacón
Keyword(s):  
New Species ◽  
Powdery Mildew ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Its Region ◽  
Specific Primer ◽  
Rdna Sequences ◽  
Sechium Edule ◽  
A New Species

A novel species of powdery mildew, Neoerysiphe sechii sp. nov., has been proposed based on host, morphological characteristics, and gene sequences. The new species was found on chayote (Sechium edule) and a wild species, chayotillo (S. mexicanum), in Veracruz, Mexico. This novel species was identified as a member of Neoerysiphe, based on the morphological characteristics of the anamorph: catenescent conidia, lobed appressoria, and Striatoidium-type conidia. No teleomorph was observed. Neoerysiphe sechii is distinguished by foot cells that are frequently cylindrical with a slight widening at the base, a feature not observed previously in other species in the genus. An Erysiphales-specific primer was designed for the 5′ end of the ITS region of the nuclear rDNA. Independent and concatenated phylogenetic analyses with our rDNA sequences and sequences available in GenBank for Neoerysiphe spp. confirmed that the powdery mildew specimens found in Sechium spp. form an independent and strongly supported lineage. This is the first report of a Neoerysiphe species causing powdery mildew on members of Cucurbitaceae, and it is the second species reported from Mexico after N. cumminsiana. Neoerysiphe sechii is found on cultivated and endemic hosts in Mexico, suggesting that the fungus itself may be endemic.

scholarly journals A new species of penzigioid Xylaria (Xylariaceae) from the cloud forest in eastern Mexico revealed through morphological and phylogenetic analyses

Botany ◽  
2019 ◽  
Vol 97 (7) ◽  
pp. 381-389
Author(s):  
Santiago Chacón ◽  
Dolores González
Keyword(s):  
Sequence Data ◽  
Novel Species ◽  
Cloud Forest ◽  
Phylogenetic Analyses ◽  
Phylogenetic Reconstruction ◽  
Morphological Characteristics ◽  
Its Sequences ◽  
Dna Sequence Data ◽  
Morphological Differences ◽  
Morphological Transformations

Xylaria subtropicalis, a species new to science, was collected from a montane cloud forest in eastern Mexico. It is described and illustrated, based on detailed macro- and microscopic morphological characteristics, habitat, and DNA sequence data. The distinctive morphological differences between X. subtropicalis and other Xylaria species include: the stromata being significantly erumpent, the size of the ascospores being 23–28 μm × 13–15 μm, and a straight germ slit as long as the spore. To determine whether this was a novel species, ITS sequences were generated and compared with 2478 sequences available for the genus from GenBank, using the software USEARCH. Additionally, a phylogenetic reconstruction was performed with Parsimony Ratchet, Maximum Likelihood, and Bayesian Inference, using 122 concatenated ITS sequences, and segments from the 28S rDNA and RPB2. Sequences of this novel species form a strongly supported lineage, clearly separated from other species of Xylaria. Phylogenetic relationships indicate that there have been numerous morphological transformations within the genus.

scholarly journals Amycolatopsis Camponoti Sp. Nov., New Tetracenomycin-Producing Actinomycete Isolated from Carpenter Ant Camponotus Vagus

2021 ◽  
Author(s):  
Yuliya V Zakalyukina ◽  
Ilya A Osterman ◽  
Jacqueline Wolf ◽  
Meina Neumann-Schaal ◽  
Imen Nouioui ◽  
...  
Keyword(s):  
Dna Hybridization ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Bacterial Species ◽  
Morphological Characteristics ◽  
Rrna Gene ◽  
Species Demarcation ◽  
Genome Sequences ◽  
Cellular Fatty Acids ◽  
Carpenter Ant

Abstract An actinobacterial strain A23T, isolated from adult ant Camponotus vagus collected in Ryazan region (Russia) and established as tetracenomycin X producer, was subjected to a polyphasic taxonomic study. Morphological characteristics of this strain included well-branched substrate mycelium and aerial hyphae fragmented into rod-shaped elements. Phylogenetic analyses based on 16S rRNA gene and genome sequences showed that strain A23T was most closely related to Amycolatopsis pretoriensis DSM 44654T (99.9%). Average nucleotide identity and digital DNA–DNA hybridization values between the genome sequences of isolate A23T and its closest relative, Amycolatopsis pretoriensis DSM 44654T, were 39.5% and 88.6%, which were below the 70% and 95-96% cut-off point recommended for bacterial species demarcation, respectively. The genome size of the isolate A23T is 10,560,374 bp with a DNA G+C content of 71.2 mol%. The whole-organism hydrolysates contain arabinose and galactose as main diagnostic sugars as well as ribose and rhamnose. It contained MK-9(H4) as the predominant menaquinone and iso-C16:0, iso-C15:0, anteiso-C17:0 and C16:0 as the major cellular fatty acids. Based on the phenotypic, genomic and phylogenetic data, isolate A23T represents a novel species of the genus Amycolatopsis, for which the name Amycolatopsis camponoti sp. nov. is proposed, and the type strain is A23T (=DSM 111725T =VKM 2882T).

scholarly journals Additions to the knowledge of Ganoderma in Thailand: Ganoderma casuarinicola, a new record; and Ganoderma thailandicum sp. nov.

MycoKeys ◽  
2019 ◽  
Vol 59 ◽  
pp. 47-65 ◽  
Author(s):  
Thatsanee Luangharn ◽  
Samantha C. Karunarathna ◽  
Peter E. Mortimer ◽  
Kevin D. Hyde ◽  
Jianchu Xu
Keyword(s):  
New Species ◽  
New Record ◽  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Tropical Regions ◽  
Southern Thailand ◽  
Distinct Lineage ◽  
Morphological Differences ◽  
High Statistical Support

Ganoderma is a cosmopolitan genus of mushrooms, which can cause root and butt rot diseases on many tree species. Members of this genus are particularly diverse in tropical regions. Some Ganoderma spp. are medicinally active and therefore are used to treat human diseases or as a dietary supplement. In this study, three Ganoderma strains were collected in tropical southern Thailand. Phylogenetic analyses of combined ITS, LSU, TEF1α and RPB2 sequence data indicated that the three strains grouped in a distinct lineage within laccate Ganoderma. One strain was collected from Surat Thani Province clustered in the G. casuarinicola clade with high statistical support (MLBS = 100% / MPBS = 98% / PP = 0.96), while the other two strains of Ganoderma, collected from Nakhon Si Thammarat Province, formed a distinct well-supported clade (MLBS = 100% / MPBS = 100% / PP = 1.00) and are described here as a new species. Ganoderma casuarinicola is reported here as a new record to Thailand. Morphological differences of the two taxa and their closely related taxa are discussed. Colour photographs of macro and micro morphological characteristics and a phylogenetic tree to show the placement of the new record and new species are provided.

scholarly journals Identification of Lasiodiplodia pseudotheobromae Causing Fruit Rot of Citrus in China

Plants ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 202
Author(s):  
Jianghua Chen ◽  
Zihang Zhu ◽  
Yanping Fu ◽  
Jiasen Cheng ◽  
Jiatao Xie ◽  
...  
Keyword(s):  
Phylogenetic Analyses ◽  
Elongation Factor ◽  
Morphological Characteristics ◽  
Citrus Fruit ◽  
Economic Loss ◽  
Fruit Rot ◽  
Post Inoculation ◽  
Citrus Reticulata ◽  
Postharvest Diseases ◽  
Citrus Reticulata Blanco

Considering the huge economic loss caused by postharvest diseases, the identification and prevention of citrus postharvest diseases is vital to the citrus industry. In 2018, 16 decayed citrus fruit from four citrus varieties—Satsuma mandarin (Citrus unshiu), Ponkan (Citrus reticulata Blanco cv. Ponkan), Nanfeng mandarin (Citrus reticulata cv. nanfengmiju), and Sugar orange (Citrus reticulata Blanco)—showing soft rot and sogginess on their surfaces and covered with white mycelia were collected from storage rooms in seven provinces. The pathogens were isolated and the pathogenicity of the isolates was tested. The fungal strains were identified as Lasiodiplodia pseudotheobromae based on their morphological characteristics and phylogenetic analyses using the internal transcribed spacer regions (ITS), translation elongation factor 1-α gene (TEF), and beta-tubulin (TUB) gene sequences. The strains could infect wounded citrus fruit and cause decay within two days post inoculation, but could not infect unwounded fruit. To our knowledge, this is the first report of citrus fruit decay caused by L. pseudotheobromae in China.

scholarly journals Molecular Analysis of Targeted Insecticide Resistance Gene Mutations in Field-Caught Mosquitos of Medical Importance From Saudi Arabia

2021 ◽  
Author(s):  
Yuan Fang ◽  
Ernest Tambo ◽  
Jing-Bo Xue ◽  
Yi Zhang ◽  
Xiao-Nong Zhou ◽  
...  
Keyword(s):  
Saudi Arabia ◽  
Insecticide Resistance ◽  
Resistance Gene ◽  
Phylogenetic Analyses ◽  
Gene Mutations ◽  
Mosquito Vector ◽  
Dengue Disease ◽  
The Status ◽  
History Of ◽  
Exon 20

Abstract Gene mutations on target sites can be a valuable indicator of the status of insecticide resistance. Jeddah, a global commercial and major port-of-entry city, is bearing the brunt of dengue disease burden in Saudi Arabia. In the current study, six genotypes of three codon combinations (989, 1016, and 1534) were observed on voltage-gated sodium channel (VGSC) gene in Jeddah’s Aedes aegypti population, with PGF/PGC as the dominant one. Two types of introns between exon 20 and 21 on VGSC have been identified for the first time in Ae. aegypti in Saudi Arabia. Statistical and phylogenetic analyses showed that the intron type was significantly associated with the 1016 allele and may reflect the history of insecticide treatment in different continents. In addition, fixation of the L1014F allele on VGSC and G119S on acetylcholinesterase 1 gene was detected in local Culex quinquefasciatus populations, with frequencies of 95.24 and 100%, respectively. To the best of our knowledge, this is the first report of resistant-associated mutations in field-caught Cx. quinquefasciatus in Saudi Arabia. The high prevalence of insecticide resistance gene mutations in local primary mosquito vector species highlights the urgent need to carry out comprehensive insecticide resistance surveillance in Saudi Arabia.

Sign in / Sign up

Export Citation Format

Share Document