Comparison of human gut microbiota in control subjects and patients with colorectal carcinoma in adenoma: Terminal restriction fragment length polymorphism and next-generation sequencing analyses

CHIKA KASAI; KAZUSHI SUGIMOTO; ISAO MORITANI; JUNICHIRO TANAKA; YUMI OYA; HIDEKAZU INOUE; MASAHIKO TAMEDA; KATSUYA SHIRAKI; MASAAKI ITO; YOSHIYUKI TAKEI; KOJIRO TAKASE

doi:10.3892/or.2015.4398

Comparison of human gut microbiota in control subjects and patients with colorectal carcinoma in adenoma: Terminal restriction fragment length polymorphism and next-generation sequencing analyses

Oncology Reports ◽

10.3892/or.2015.4398 ◽

2015 ◽

Vol 35 (1) ◽

pp. 325-333 ◽

Cited By ~ 55

Author(s):

CHIKA KASAI ◽

KAZUSHI SUGIMOTO ◽

ISAO MORITANI ◽

JUNICHIRO TANAKA ◽

YUMI OYA ◽

...

Keyword(s):

Next Generation Sequencing ◽

Restriction Fragment Length Polymorphism ◽

Colorectal Carcinoma ◽

Gut Microbiota ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Human Gut ◽

Generation Sequencing ◽

Restriction Fragment Length

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Comparison of the gut microbiota composition between obese and non-obese individuals in a Japanese population, as analyzed by terminal restriction fragment length polymorphism and next-generation sequencing

BMC Gastroenterology ◽

10.1186/s12876-015-0330-2 ◽

2015 ◽

Vol 15 (1) ◽

Cited By ~ 177

Author(s):

Chika Kasai ◽

Kazushi Sugimoto ◽

Isao Moritani ◽

Junichiro Tanaka ◽

Yumi Oya ◽

...

Keyword(s):

Next Generation Sequencing ◽

Restriction Fragment Length Polymorphism ◽

Gut Microbiota ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Microbiota Composition ◽

Generation Sequencing ◽

Gut Microbiota Composition ◽

Restriction Fragment Length

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Pros and Cons of Ion-Torrent Next Generation Sequencing versus Terminal Restriction Fragment Length Polymorphism T-RFLP for Studying the Rumen Bacterial Community

PLoS ONE ◽

10.1371/journal.pone.0101435 ◽

2014 ◽

Vol 9 (7) ◽

pp. e101435 ◽

Cited By ~ 31

Author(s):

Gabriel de la Fuente ◽

Alejandro Belanche ◽

Susan E. Girwood ◽

Eric Pinloche ◽

Toby Wilkinson ◽

...

Keyword(s):

Next Generation Sequencing ◽

Restriction Fragment Length Polymorphism ◽

Bacterial Community ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Ion Torrent ◽

Pros And Cons ◽

Generation Sequencing ◽

Restriction Fragment Length

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Data mining analysis of terminal restriction fragment length polymorphism shows geographical differences in the human gut microbiota

Biomedical Reports ◽

10.3892/br.2013.127 ◽

2013 ◽

Vol 1 (4) ◽

pp. 559-562 ◽

Cited By ~ 4

Author(s):

AKIRA ANDOH ◽

TOSHIO KOBAYASHI ◽

HIROYUKI KUZUOKA ◽

YASUO SUZUKI ◽

TOSHIYUKI MATSUI ◽

...

Keyword(s):

Data Mining ◽

Restriction Fragment Length Polymorphism ◽

Gut Microbiota ◽

Restriction Fragment ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Human Gut ◽

Geographical Differences ◽

Restriction Fragment Length

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Peer Review #1 of "Trends in bacterial and fungal communities in ant nests observed with Terminal-Restriction Fragment Length Polymorphism (T-RFLP) and Next Generation Sequencing (NGS) techniques—validity and compatibility in ecological studies (v0.1)"

10.7287/peerj.5289v0.1/reviews/1 ◽

2018 ◽

Keyword(s):

Next Generation Sequencing ◽

Restriction Fragment Length Polymorphism ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Fungal Communities ◽

Ecological Studies ◽

Next Generation Sequencing Ngs ◽

Generation Sequencing ◽

Restriction Fragment Length

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Peer Review #1 of "Trends in bacterial and fungal communities in ant nests observed with Terminal-Restriction Fragment Length Polymorphism (T-RFLP) and Next Generation Sequencing (NGS) techniques—validity and compatibility in ecological studies (v0.2)"

10.7287/peerj.5289v0.2/reviews/1 ◽

2018 ◽

Keyword(s):

Next Generation Sequencing ◽

Restriction Fragment Length Polymorphism ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Fungal Communities ◽

Ecological Studies ◽

Next Generation Sequencing Ngs ◽

Generation Sequencing ◽

Restriction Fragment Length

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Peer Review #2 of "Trends in bacterial and fungal communities in ant nests observed with Terminal-Restriction Fragment Length Polymorphism (T-RFLP) and Next Generation Sequencing (NGS) techniques—validity and compatibility in ecological studies (v0.1)"

10.7287/peerj.5289v0.1/reviews/2 ◽

2018 ◽

Keyword(s):

Next Generation Sequencing ◽

Restriction Fragment Length Polymorphism ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Fungal Communities ◽

Ecological Studies ◽

Next Generation Sequencing Ngs ◽

Generation Sequencing ◽

Restriction Fragment Length

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Comparison of gut microbiota composition between laboratory-bred marmosets (Callithrix jacchus) with chronic diarrhea and healthy animals using terminal restriction fragment length polymorphism analysis

Microbiology and Immunology ◽

10.1111/1348-0421.12655 ◽

2018 ◽

Vol 62 (11) ◽

pp. 702-710 ◽

Cited By ~ 3

Author(s):

Yuko Shigeno ◽

Mutsumi Toyama ◽

Mutsumi Nakamura ◽

Kimie Niimi ◽

Eiki Takahashi ◽

...

Keyword(s):

Restriction Fragment Length Polymorphism ◽

Gut Microbiota ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Chronic Diarrhea ◽

Polymorphism Analysis ◽

Microbiota Composition ◽

Gut Microbiota Composition ◽

Restriction Fragment Length

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Terminal Restriction Fragment Length Polymorphism Analysis of the Gut Microbiota Profiles of Pediatric Patients with Inflammatory Bowel Disease

Digestion ◽

10.1159/000339777 ◽

2012 ◽

Vol 86 (2) ◽

pp. 129-135 ◽

Cited By ~ 20

Author(s):

Tomoki Aomatsu ◽

Hirotsugu Imaeda ◽

Takehide Fujimoto ◽

Kenichiro Takahashi ◽

Atsushi Yoden ◽

...

Keyword(s):

Inflammatory Bowel Disease ◽

Restriction Fragment Length Polymorphism ◽

Gut Microbiota ◽

Length Polymorphism ◽

Fragment Length ◽

Pediatric Patients ◽

Fragment Length Polymorphism ◽

Polymorphism Analysis ◽

Inflammatory Bowel ◽

Restriction Fragment Length

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Terminal-Restriction Fragment Length Polymorphism (T-RFLP) Analysis for Changes in the Gut Microbiota Profiles of Indomethacin- and Rebamipide-Treated Mice

Digestion ◽

10.1159/000341508 ◽

2012 ◽

Vol 86 (3) ◽

pp. 250-257 ◽

Cited By ~ 13

Author(s):

Hirotsugu Imaeda ◽

Takehide Fujimoto ◽

Kenichiro Takahashi ◽

Eiji Kasumi ◽

Yoshihide Fujiyama ◽

...

Keyword(s):

Restriction Fragment Length Polymorphism ◽

Gut Microbiota ◽

Restriction Fragment ◽

Length Polymorphism ◽

Fragment Length ◽

Fragment Length Polymorphism ◽

Rflp Analysis ◽

Restriction Fragment Length

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M1108 Fingerprinting the Human Gut Microbiome: Evaluation of a Terminal Restriction Fragment Length Polymorphism (T-RFLP) Kit On Human Gastrointestinal Biopsies

Gastroenterology ◽

10.1016/s0016-5085(09)61611-5 ◽

2009 ◽

Vol 136 (5) ◽

pp. A-351

Author(s):

Debby Soeltan-Kaersenhout ◽

Adriaan A. van Bodegraven ◽

Paul H. Savelkoul

Keyword(s):

Restriction Fragment Length Polymorphism ◽

Restriction Fragment ◽

Length Polymorphism ◽

Fragment Length ◽

Gut Microbiome ◽

Fragment Length Polymorphism ◽

Human Gut ◽

Human Gut Microbiome ◽

Restriction Fragment Length

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