scholarly journals Detection of copy number variants and loss of heterozygosity from impure tumor samples using whole exome sequencing data

2018 ◽  
Author(s):  
Xiaocheng Liu ◽  
Ao Li ◽  
Jianing Xi ◽  
Huanqing Feng ◽  
Minghui Wang
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Loss Of Heterozygosity ◽  
Copy Number ◽  
Copy Number Variants ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data

scholarly journals CANOES: detecting rare copy number variants from whole exome sequencing data

2014 ◽  
Vol 42 (12) ◽  
pp. e97-e97 ◽  
Author(s):  
Daniel Backenroth ◽  
Jason Homsy ◽  
Laura R. Murillo ◽  
Joe Glessner ◽  
Edwin Lin ◽  
...  
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Copy Number Variants ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data

scholarly journals EXCAVATOR: detecting copy number variants from whole-exome sequencing data

2013 ◽  
Vol 14 (10) ◽  
pp. R120 ◽  
Author(s):  
Alberto Magi ◽  
Lorenzo Tattini ◽  
Ingrid Cifola ◽  
Romina D’Aurizio ◽  
Matteo Benelli ◽  
...  
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Copy Number Variants ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data

scholarly journals Enhanced copy number variants detection from whole-exome sequencing data using EXCAVATOR2

2016 ◽  
pp. gkw695 ◽  
Author(s):  
Romina D'Aurizio ◽  
Tommaso Pippucci ◽  
Lorenzo Tattini ◽  
Betti Giusti ◽  
Marco Pellegrini ◽  
...  
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Copy Number Variants ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data

scholarly journals Evaluation of somatic copy number estimation tools for whole-exome sequencing data

2015 ◽  
Vol 17 (2) ◽  
pp. 185-192 ◽  
Author(s):  
Jae-Yong Nam ◽  
Nayoung K. D. Kim ◽  
Sang Cheol Kim ◽  
Je-Gun Joung ◽  
Ruibin Xi ◽  
...  
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Sequencing Data ◽  
Copy Number Estimation ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data

scholarly journals DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data

2015 ◽  
Vol 43 (W1) ◽  
pp. W289-W294 ◽  
Author(s):  
Yuanwei Zhang ◽  
Zhenhua Yu ◽  
Rongjun Ban ◽  
Huan Zhang ◽  
Furhan Iqbal ◽  
...  
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Copy Number Variations ◽  
Online Detection ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data

scholarly journals CEQer: A Graphical Tool for Copy Number and Allelic Imbalance Detection from Whole-Exome Sequencing Data

PLoS ONE ◽  
2013 ◽  
Vol 8 (10) ◽  
pp. e74825 ◽  
Author(s):  
Rocco Piazza ◽  
Vera Magistroni ◽  
Alessandra Pirola ◽  
Sara Redaelli ◽  
Roberta Spinelli ◽  
...  
Keyword(s):  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Allelic Imbalance ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Graphical Tool ◽  
Whole Exome Sequencing Data

An Evaluation of Copy Number Variation Detection Tools from Whole-Exome Sequencing Data

2014 ◽  
Vol 35 (7) ◽  
pp. 899-907 ◽  
Author(s):  
Renjie Tan ◽  
Yadong Wang ◽  
Sarah E. Kleinstein ◽  
Yongzhuang Liu ◽  
Xiaolin Zhu ◽  
...  
Keyword(s):  
Copy Number Variation ◽  
Exome Sequencing ◽  
Whole Exome Sequencing ◽  
Copy Number ◽  
Sequencing Data ◽  
Exome Sequencing Data ◽  
Whole Exome ◽  
Whole Exome Sequencing Data ◽  
Number Variation ◽  
Copy Number Variation Detection
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