scholarly journals Beside P53 and PTEN: Identification of molecular alterations of the RAS/MAPK and PI3K/AKT signaling pathways in high-grade serous ovarian carcinomas to determine potential novel therapeutic targets

2016 ◽  
Vol 12 (5) ◽  
pp. 3264-3272 ◽  
Author(s):  
Shuhui Chen ◽  
Elisa Cavazza ◽  
Catherine Barlier ◽  
Julia Salleron ◽  
Pierre Filhine-Tresarrieu ◽  
...  
Author(s):  
Giuseppe Sgroi ◽  
Giulia Russo ◽  
Francesco Pappalardo

Abstract Summary Although several bioinformatics tools have been developed to examine signaling pathways, little attention has been given to ever long-distance crosstalk mechanisms. Here, we developed PETAL, a Python tool that automatically explores and detects the most relevant nodes within a KEGG pathway, scanning and performing an in-depth search. PETAL can contribute to discovering novel therapeutic targets or biomarkers that are potentially hidden and not considered in the network under study. Availability PETAL is a freely available open-source software. It runs on all platforms that support Python3. The user manual and source code are accessible from https://github.com/Pex2892/PETAL.


2015 ◽  
Vol 89 (9) ◽  
pp. 1401-1438 ◽  
Author(s):  
Yow Keat Tham ◽  
Bianca C. Bernardo ◽  
Jenny Y. Y. Ooi ◽  
Kate L. Weeks ◽  
Julie R. McMullen

2019 ◽  
Vol 9 ◽  
Author(s):  
Dana Mitchell ◽  
Sreenivasulu Chintala ◽  
Kaleigh Fetcko ◽  
Mario Henriquez ◽  
Brij N. Tewari ◽  
...  

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