scholarly journals Clonal persistence of Salmonella enterica serovars Montevideo, Tennessee, and Infantis in feed factories

2016 ◽  
Vol 10 (06) ◽  
pp. 662-666 ◽  
Author(s):  
Bojana Prunić ◽  
Dubravka Milanov ◽  
Maja Velhner ◽  
Marko Pajić ◽  
Ljiljana Pavlović ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Salmonella Enterica ◽  
Biofilm Formation ◽  
Animal Feed ◽  
Molecular Techniques ◽  
Behavior Patterns ◽  
Test Results ◽  
Biotechnology Research ◽  
Salmonella Serovars ◽  
Feed Samples

Introduction: Novel molecular techniques applied in biotechnology research have provided sound evidence on clonal persistence of distinct serovars of Salmonella in feed factory environments, over long periods of time (months, even years), which can be responsible for repeated in-house contamination of final products. In this study, we examined the possibility of clonal persistence of isolates of three Salmonella serovars that have been repeatedly identified in animal feed samples from three feed factories throughout a two-year period. Methodology: The isolates Salmonella enterica serovars Tennessee (n = 7), Montevideo (n = 8), and Infantis (n = 4) were tested for genetic diversity using pulsed-field gel electrophoresis (PFGE) and multicellular behavior patterns by applying the Congo red agar test. Results: SpeI and XbaI macro-restriction profiles indicated that isolates S. Montevideo and S. Infantis were identical, whereas isolates of S. Tennessee demonstrated greater genetic diversity, although the genetic differences did not exceed 10%. All Salmonella serovars demonstrated the ability to produce predominant matrix compounds essential for biofilm formation, curli fimbriae and cellulose. Conclusions: The identification of identical clones of S. Montevideo and S. Infantis, as well as the minor genetic diversity of S. Tennessee, which have been repeatedly isolated from animal feed in three production plants throughout a two-year period, indirectly suggests the possibility of their persistence in feed factory environments. Their ability to express the key biofilm matrix components further supports this hypothesis.

Method development and validation for melamine and its derivatives in rice concentrates by liquid chromatography. Application to animal feed samples

2008 ◽  
Vol 392 (3) ◽  
pp. 523-531 ◽  
Author(s):  
Roberto Muñiz-Valencia ◽  
Silvia G. Ceballos-Magaña ◽  
Daniel Rosales-Martinez ◽  
Raquel Gonzalo-Lumbreras ◽  
Ana Santos-Montes ◽  
...  
Keyword(s):  
Liquid Chromatography ◽  
Method Development ◽  
Animal Feed ◽  
Method Development And Validation ◽  
Development And Validation ◽  
Feed Samples

Molecular markers and antioxidant activity in berry crops: Genetic diversity analysis

2012 ◽  
Vol 92 (6) ◽  
pp. 1121-1133 ◽  
Author(s):  
S. C. Debnath ◽  
Y. L. Siow ◽  
J. Petkau ◽  
D. An ◽  
N. V. Bykova
Keyword(s):  
Genetic Diversity ◽  
Antioxidant Activity ◽  
Molecular Markers ◽  
Molecular Techniques ◽  
Diversity Analysis ◽  
Full Potential ◽  
Genetic Diversity Analysis ◽  
Wide Range ◽  
Berry Crops ◽  
Improvement Programs

Debnath, S. C., Siow, Y. L., Petkau, J., An, D. and Bykova, N. V. 2012. Molecular markers and antioxidant activity in berry crops: Genetic diversity analysis. Can. J. Plant Sci. 92: 1121–1133. An improved understanding of important roles of dietary fruits in maintaining human health has led to a dramatic increase of global berry crop production. Berry fruits contain relatively high levels of vitamin C, cellulose and pectin, and produce anthocyanins, which have important therapeutic values, including antitumor, antiulcer, antioxidant and anti-inflammatory activities. There is a need to develop reliable methods to identify berry germplasm and assess genetic diversity/relatedness for dietary properties in berry genotypes for practical breeding purposes through genotype selection in a breeding program for cultivar development, and proprietary-rights protection. The introduction of molecular biology techniques, such as DNA-based markers, allows direct comparison of different genetic materials independent of environmental influences. Significant progress has been made in diversity analysis of wild cranberry, lowbush blueberry, lingonberry and cloudberry germplasm, and in strawberry and raspberry cultivars and advanced breeding lines developed in Canada. Inter simple sequence repeat (ISSR) markers detected an adequate degree of polymorphism to differentiate among berry genotypes, making this technology valuable for cultivar identification and for the more efficient choice of parents in the current berry improvement programs. Although multiple factors affect antioxidant activity, a wide range of genetic diversity has been reported in wild and cultivated berry crops. Diversity analysis based on molecular markers did not agree with those from antioxidant activity. The paper also discusses the issues that still need to be addressed to utilize the full potential of molecular techniques including expressed sequence tag-polymerase chain reaction (EST-PCR) analysis to develop improved environment-friendly berry cultivars suited to the changing needs of growers and consumers.

scholarly journals Molecular Analyses of Salmonellaenterica Isolates from Fish Feed Factories and Fish Feed Ingredients

2003 ◽  
Vol 69 (2) ◽  
pp. 1075-1081 ◽  
Author(s):  
Live L. Nesse ◽  
Kerstin Nordby ◽  
Even Heir ◽  
Bjarne Bergsjoe ◽  
Traute Vardund ◽  
...  
Keyword(s):  
Gel Electrophoresis ◽  
Salmonella Enterica ◽  
Profile Analysis ◽  
Plasmid Profile ◽  
Pulsed Field Gel Electrophoresis ◽  
Fish Feed ◽  
Molecular Analyses ◽  
Feed Ingredients ◽  
Pulsed Field ◽  
Salmonella Serovars

ABSTRACT Isolates of the most commonly observed salmonella serovars in Norwegian fish feed factories from 1998 to 2000 (Salmonella enterica serovar Agona, S. enterica serovar Montevideo, S. enterica serovar Senftenberg, and S. enterica serovar Kentucky) were studied by pulsed-field gel electrophoresis (PFGE) and plasmid profile analysis and compared to isolates of the same serovars from fish feed ingredients, humans, and other sources (a total of 112 isolates). Within each serovar, a variety of distinct PFGE types (with similarity levels less than 90%) were observed in the feed ingredients and other sources, while only two distinct types of each serovar were identified in the factories. The combined results of PFGE and plasmid analyses showed that each factory harbored only a few S. enterica clones. Some of these clones persisted for at least 3 years in the factories, indicating that there was long-lasting contamination probably due to inadequate decontamination procedures.

scholarly journals Genetic Diversity of Salvia Species Assessed by ISSR and RAPD Markers

2016 ◽  
Vol 44 (2) ◽  
pp. 431-436 ◽  
Author(s):  
Masoumeh YOUSEFIAZARKHANIAN ◽  
Ali ASGHARI ◽  
Jafar AHMADI ◽  
Behvar ASGHARI ◽  
Ali Ashraf JAFARI
Keyword(s):  
Genetic Diversity ◽  
Genetic Polymorphisms ◽  
Genomic Dna ◽  
Rapd Markers ◽  
Genetic Relationships ◽  
Genetic Variations ◽  
Molecular Techniques ◽  
Wild Populations ◽  
Similarity Coefficients ◽  
The World

The genus Salvia includes an enormous assemblage of nearly 1,000 species dispersed around the world. Due to possible threats to this genus, there is an immediate requirement to evaluate the diversity of its wild populations. ISSR and RAPD molecular techniques were used to evaluate the genetic relationships among twenty-one ecotypes of eight Salvia species. Amplification of genomic DNA using 23 primers (15 RAPD and eight ISSR) produced 280 bands, of which 91% were polymorphic. The results of marker parameters showed no clear difference between two marker systems. It was generally observed that both ISSR and RAPD markers had similar efficiency in detecting genetic polymorphisms with remarkable ability to differentiate the closely related ecotypes of Salvia. Nei’s similarity coefficients for these techniques ranged from 0.48 to 0.98. Based on the results of clustering, PCoA and AMOVA, the genetic diversity between and within species was confirmed. So, conservation and domestication of the genus Salvia must be due to levels of genetic variations.

Influence of milk, chicken residues and oxygen levels on biofilm formation on stainless steel, gene expression and small RNAs in Salmonella enterica

Food Control ◽  
2018 ◽  
Vol 90 ◽  
pp. 1-9 ◽  
Author(s):  
Alexandre Lamas ◽  
Patricia Regal ◽  
Beatriz Vázquez ◽  
José Manuel Miranda ◽  
Alberto Cepeda ◽  
...  
Keyword(s):  
Gene Expression ◽  
Stainless Steel ◽  
Salmonella Enterica ◽  
Biofilm Formation ◽  
Small Rnas ◽  
Oxygen Levels

Identification of Salmonella enterica Serovar Typhimurium Using Specific PCR Primers Obtained by Comparative Genomics in Salmonella Serovars

2006 ◽  
Vol 69 (7) ◽  
pp. 1653-1661 ◽  
Author(s):  
H. J. KIM ◽  
S. H. PARK ◽  
T. H. LEE ◽  
B. H. NAHM ◽  
Y. H. CHUNG ◽  
...  
Keyword(s):  
Comparative Genomics ◽  
Salmonella Enterica ◽  
Target Genes ◽  
Salmonella Enterica Serovar Typhimurium ◽  
Foodborne Pathogen ◽  
Pcr Primers ◽  
Genomic Sequences ◽  
Local Alignment ◽  
Serovar Typhimurium ◽  
Salmonella Serovars

Salmonella enterica serovar Typhimurium is a major foodborne pathogen throughout the world. Until now, the specific target genes for the detection and identification of serovar Typhimurium have not been developed. To determine the specific probes for serovar Typhimurium, the genes of serovar Typhimurium LT2 that were expected to be unique were selected with the BLAST (Basic Local Alignment Search Tool) program within GenBank. The selected genes were compared with 11 genomic sequences of various Salmonella serovars by BLAST. Of these selected genes, 10 were expected to be specific to serovar Typhimurium and were not related to virulence factor genes of Salmonella pathogenicity island or to genes of the O and H antigens of Salmonella. Primers for the 10 selected genes were constructed, and PCRs were evaluated with various genomic DNAs of Salmonella and non-Salmonella strains for the specific identification of Salmonella serovar Typhimurium. Among all the primer sets for the 10 genes, STM4497 showed the highest degree of specificity to serovar Typhimurium. In this study, a specific primer set for Salmonella serovar Typhimurium was developed on the basis of the comparison of genomic sequences between Salmonella serovars and was validated with PCR. This method of comparative genomics to select target genes or sequences can be applied to the specific detection of microorganisms.

scholarly journals Salmonella enterica serovars associated with bacteremia in Canada, 2006–2019

2021 ◽  
Vol 47 (56) ◽  
pp. 259-268
Author(s):  
Sandeep Tamber ◽  
Brendan Dougherty ◽  
Kimberly Nguy
Keyword(s):  
Organ Failure ◽  
Salmonella Enterica ◽  
Surveillance Program ◽  
Bacterial Genus ◽  
Salmonella Infections ◽  
Clinical Presentations ◽  
Salmonella Serovars

Background: Members of the bacterial genus Salmonella cause salmonellosis, a disease with a spectrum of clinical presentations from a self-limiting gastroenteritis to more severe bacteremia, organ failure and sepsis. The genus consists of over 2,600 serological variants (serovars). Important differences in the pathogenesis of Salmonella serovars have been noted. Objective: The purpose of this study was to determine which Salmonella serovars were more likely to be associated with bacteremia in Canada. Methods: Information on the total number of Salmonella infections and blood isolations reported to the National Enteric Surveillance Program (NESP) from 2006 to 2019 was extracted for each serovar. The risk (proportion) and likelihood (odds) of bacteremia were calculated for all serovars. Results: Of the 96,082 Salmonella cases reported to the NESP during the 14-year study period, 4.4% (95% CI: 4.3%–4.6%) were bacteremic. Twenty nontyphoidal Salmonella (NTS) serovars were associated with lower rates of bacteremia compared to all NTS serovars, and 19 NTS serovars were identified as having higher rates. Heidelberg, Oranienburg, Schwarzengrund, Virchow, Panama and Poona among the top 25 most commonly reported serovars in Canada during the study period. Conclusion: The identification of serovars associated with Salmonella bacteremia in Canada is a first step towards understanding differences in pathogenesis and disease presentation.

scholarly journals The genotypic and genetic diversity of enset (Ensete ventricosum) landraces used in traditional medicine is similar to the diversity found in starchy landraces

2020 ◽  
Author(s):  
gizachew Woldesenbet Nuraga ◽  
Tileye Feyissa ◽  
Kassahun Tesfaye ◽  
Manosh Kumar Biswas ◽  
Trude Schwarzacher ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Traditional Medicine ◽  
Animal Feed ◽  
Management Practice ◽  
Rural Livelihoods ◽  
Medicinal Uses ◽  
Ensete Ventricosum ◽  
Southwestern Ethiopia ◽  
Medicinal Value ◽  
Use Values

Abstract Background Enset (Ensete ventricosum) is a multipurpose crop extensively cultivated in southern and southwestern Ethiopia for human food, animal feed and fiber. It contributes to the food security and rural livelihoods of 20 million people. Several distinct enset landraces are cultivated for their uses in traditional medicine. Socio-economic changes and the loss of indigenous knowledge might lead to the decline of important medicinal landraces and their associated genetic diversity. However, it is currently unknown whether medicinal landraces are genetically differentiated from other landraces. Here, we characterize the genetic diversity of medicinal enset landraces to support effective conservation and utilization of their diversity Results We evaluated the genetic diversity of 51 enset landraces of which 38 have reported medicinal value. A total of 38 alleles were detected across the 15 SSR loci. AMOVA revealed that 97.6% of the total genetic variation is among individual with an FST of 0.024 between medicinal and non-medicinal landraces. A neighbor-joining tree showed four separate clusters with no correlation to the use values of the landraces. Principal coordinate analysis also confirmed the absence of distinct clustering between the groups, showing low differentiation among landraces used in traditional medicine and those having other use values. Conclusion We found that enset landraces were clustered irrespective of their use value, showing no evidence for genetic differentiation between enset grown for ‘medicinal’ uses and non-medicinal landraces. This suggests that enset medicinal properties may be restricted to a more limited number of genotypes, a product of interaction with the environment or management practice, or partly misreported. The study provide baseline information that promotes further investigations in exploiting the medicinal value of these specific landraces

scholarly journals Green Support Capacity for Livestock Feed and Yield of Oil Palm Plantation in Watubangga Sub District Kolaka District

2021 ◽  
Vol 23 (1) ◽  
pp. 44
Author(s):  
La Ode Muhammad Munadi ◽  
Deki Zulkarnain ◽  
Muhammad Amrullah Pagala
Keyword(s):  
Oil Palm ◽  
Carrying Capacity ◽  
Research Method ◽  
Animal Feed ◽  
Specific Area ◽  
Oil Palm Plantation ◽  
Livestock Feed ◽  
Research Material ◽  
Green Potential ◽  
Feed Samples

This research aims to determine the support of greenery and the results of oil palm plantations as feed for Balinese cattle in Watubangga Sub District. The research method is done by observing the green potential of animal feed. Samples were obtained from the tiling of fodder greens. The research material is a group of grasses, pods, riddles, and the results of oil palm plantations. The research method analyzes weed dominance's carrying capacity and summed dominant ratio (SDR) in a specific area. The results showed nine types of greenery, two types of pods, two types of technical puzzles, and four types of plantation results as a source of livestock feed in Watubangga Sub District. The production of green dried material can meet the needs of 255.33 livestock units, and the effects of oil palm can meet the consumption needs of Balinese cattle 351,516 livestock units.

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