scholarly journals Changes in the risk of fine-root mortality with age: a case study in peach, Prunus persica (Rosaceae)

2002 ◽  
Vol 89 (1) ◽  
pp. 79-87 ◽  
Author(s):  
Christina E. Wells ◽  
D. Michael Glenn ◽  
David M. Eissenstat
Keyword(s):  
Prunus Persica ◽  
Fine Root ◽  
Root Mortality

Impact of tephra deposition on growth in conifers: the year of the eruption

1984 ◽  
Vol 14 (5) ◽  
pp. 731-739 ◽  
Author(s):  
Thomas M. Hinckley ◽  
Hiromi Imoto ◽  
Katharine Lee ◽  
Susan Lacker ◽  
Yasushi Morikawa ◽  
...  
Keyword(s):  
Fine Root ◽  
Height Growth ◽  
Diameter Growth ◽  
Growth Reduction ◽  
Root Mortality ◽  
Foliar Damage ◽  
Associated Species ◽  
The Impact ◽  
Total Tree ◽  
Mount St Helens

Seven sites ranging from 15 to 135 km from Mount St. Helens were selected to study the impact of air-fall tephra on the growth of Abiesamabilis (Dougl.) Forbes, A. procera Rehd., Pseudotsugamenziesii (Mirb.) Franco, Tsugaheterophylla (Raf.) Sarg., and T. mertensiana (Bong.) Carr. As tephra depth increased, there was a corresponding increase in visible foliar damage and associated decreases in diameter and height growth. Reduction in diameter growth was greater than reduction in height growth. The reduction in diameter growth approached 50% in both trees and saplings of A. amabilis. Growth reduction in true firs was greater than in associated species. This difference was related to their greater capacity for interception and retention of air-fall tephra. Damage to trees, and resulting growth reductions, were due to tephra coverage of both the foliage and the soil. Coverage of the foliage resulted in foliar damage, foliage abscission and reduction of total tree foliar area, and increased fine root mortality. Tephra coverage of the soil had the potential to restrict oxygen diffusion into the soil. However, soil oxygen concentrations less than 10% were measured only once over a 2-year period.

Root production, mortality and turnover in soil profiles as affected by clipping in a temperate grassland on the Loess Plateau

2019 ◽  
Vol 12 (6) ◽  
pp. 1059-1072
Author(s):  
Lin Wei ◽  
Pengwei Yao ◽  
Guanghua Jing ◽  
Xiefeng Ye ◽  
Jimin Cheng
Keyword(s):  
Loess Plateau ◽  
Soil Profile ◽  
Root Length ◽  
Root Biomass ◽  
Turnover Rate ◽  
Fine Root ◽  
Root Production ◽  
The Loess Plateau ◽  
Soil Layers ◽  
Root Mortality

Abstract Aims Clipping or mowing for hay, as a prevalent land-use practice, is considered to be an important component of global change. Root production and turnover in response to clipping have great implications for the plant survival strategy and grassland ecosystem carbon processes. However, our knowledge about the clipping effect on root dynamics is mainly based on root living biomass, and limited by the lack of spatial and temporal observations. The study aim was to investigate the effect of clipping on seasonal variations in root length production and mortality and their distribution patterns in different soil layers in semiarid grassland on the Loess Plateau. Methods Clipping was performed once a year in June to mimic the local spring livestock grazing beginning from 2014. The minirhizotron technique was used to monitor the root production, mortality and turnover rate at various soil depths (0–10, 10–20, 20–30 and 30–50 cm) in 2014 (from 30 May to 29 October) and 2015 (from 22 April to 25 October). Soil temperature and moisture in different soil layers were also measured during the study period. Important Findings Our results showed that: (i) Clipping significantly decreased the cumulative root production (P < 0.05) and increased the cumulative root mortality and turnover rates of the 0–50 cm soil profile for both years. (ii) Clipping induced an immediate and sharp decrease in root length production and an increase in root length mortality in all soil layers. However, with plant regrowth, root production increased and root mortality decreased gradually, with the root production at a depth of 30–50 cm even exceeding the control in September–October 2014 and April–May 2015. (iii) Clipping mainly reduced root length production and increased root length mortality in the upper 0–20 cm soil profile with rapid root turnover. However, roots at deeper soil layers were either little influenced by clipping or exhibited an opposite trend with slower turnover rate compared with the upper soil profile, leading to the downward transport of root production and living root biomass. These findings indicate that roots in deeper soil layers tend to favour higher root biomass and longer fine root life spans to maximize the water absorption efficiency under environmental stress, and also suggest that short-term clipping would reduce the amount of carbon through fine root litter into the soil, especially in the shallow soil profile.

scholarly journals Fine Root Mortality Increased by Earthquake Induced Landslides

2016 ◽  
Vol 05 (03) ◽  
pp. 172-176 ◽  
Author(s):  
Yinping Bai ◽  
Gang Yang
Keyword(s):  
Fine Root ◽  
Root Mortality

scholarly journals Discovery and Annotation of Plant Endogenous Target Mimicry Sequences from Public Transcriptome Libraries: A Case Study of Prunus persica

2017 ◽  
Vol 14 (4) ◽  
Author(s):  
Gökhan Karakülah
Keyword(s):  
Prunus Persica ◽  
Peach Fruit ◽  
Novel Transcript ◽  
Development Processes ◽  
Plant Transcriptome ◽  
Non Coding Rnas ◽  
Endogenous Target ◽  
Diverse Plant Species ◽  
Transcript Discovery

AbstractNovel transcript discovery through RNA sequencing has substantially improved our understanding of the transcriptome dynamics of biological systems. Endogenous target mimicry (eTM) transcripts, a novel class of regulatory molecules, bind to their target microRNAs (miRNAs) by base pairing and block their biological activity. The objective of this study was to provide a computational analysis framework for the prediction of putative eTM sequences in plants, and as an example, to discover previously un-annotated eTMs in Prunus persica (peach) transcriptome. Therefore, two public peach transcriptome libraries downloaded from Sequence Read Archive (SRA) and a previously published set of long non-coding RNAs (lncRNAs) were investigated with multi-step analysis pipeline, and 44 putative eTMs were found. Additionally, an eTM-miRNA-mRNA regulatory network module associated with peach fruit organ development was built via integration of the miRNA target information and predicted eTM-miRNA interactions. My findings suggest that one of the most widely expressed miRNA families among diverse plant species, miR156, might be potentially sponged by seven putative eTMs. Besides, the study indicates eTMs potentially play roles in the regulation of development processes in peach fruit via targeting specific miRNAs. In conclusion, by following the step-by step instructions provided in this study, novel eTMs can be identified and annotated effectively in public plant transcriptome libraries.

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