scholarly journals Bioremediation of fluazifop-p-butyl herbicide by some soil bacteria isolated from various regions of Turkey in an artificial agricultural field

2020 ◽  
Vol 46 (3) ◽  
Author(s):  
Gokhan Onder Erguven ◽  
Yasar Nuhoglu
Keyword(s):  
Soil Bacteria ◽  
Agricultural Field

scholarly journals Chitin Amendment Increases Soil Suppressiveness toward Plant Pathogens and Modulates the Actinobacterial and Oxalobacteraceal Communities in an Experimental Agricultural Field

2013 ◽  
Vol 79 (17) ◽  
pp. 5291-5301 ◽  
Author(s):  
Mariana Silvia Cretoiu ◽  
Gerard W. Korthals ◽  
Johnny H. M. Visser ◽  
Jan Dirk van Elsas
Keyword(s):  
Microbial Communities ◽  
Verticillium Dahliae ◽  
Soil Bacteria ◽  
Plant Pathogens ◽  
Soil Microbial Communities ◽  
Agricultural Field ◽  
Content Type ◽  
Soil Suppressiveness ◽  
Soil Microbial ◽  
Long Term Experiment

ABSTRACTA long-term experiment on the effect of chitin addition to soil on the suppression of soilborne pathogens was set up and monitored for 8 years in an experimental field, Vredepeel, The Netherlands. Chitinous matter obtained from shrimps was added to soil top layers on two different occasions, and the suppressiveness of soil towardVerticillium dahliae, as well as plant-pathogenic nematodes, was assessed, in addition to analyses of the abundances and community structures of members of the soil microbiota. The data revealed that chitin amendment had raised the suppressiveness of soil, in particular towardVerticillium dahliae, 9 months after the (second) treatment, extending to 2 years following treatment. Moreover, major effects of the added chitin on the soil microbial communities were detected. First, shifts in both the abundances and structures of the chitin-treated soil microbial communities, both of total soil bacteria and fungi, were found. In addition, the abundances and structures of soil actinobacteria and theOxalobacteraceaewere affected by chitin. At the functional gene level, the abundance of specific (family-18 glycoside hydrolase) chitinase genes carried by the soil bacteria also revealed upshifts as a result of the added chitin. The effects of chitin noted for theOxalobacteraceaewere specifically related to significant upshifts in the abundances of the speciesDuganella violaceinigraandMassilia plicata. These effects of chitin persisted over the time of the experiment.

Microbial diversity of soil bacteria in agricultural field contaminated with heavy metals

2008 ◽  
Vol 20 (3) ◽  
pp. 359-363 ◽  
Author(s):  
Chihching CHIEN ◽  
Yumei KUO ◽  
Changchieh CHEN ◽  
Chunwei HUNG ◽  
Chihwei YEH ◽  
...  
Keyword(s):  
Heavy Metals ◽  
Microbial Diversity ◽  
Soil Bacteria ◽  
Agricultural Field

DIVERSITY OF SOIL BACTERIA AS INDICATOR OF SOIL POLLUTION IN MOLDAVIA REGION, ROMANIA

2017 ◽  
Vol 16 (4) ◽  
pp. 879-889 ◽  
Author(s):  
Florin Daniel Lipsa ◽  
Eugen Ulea ◽  
Andreea Mihaela Balau ◽  
Feodor Filipov ◽  
Evelina Cristina Morari
Keyword(s):  
Soil Pollution ◽  
Soil Bacteria

Isolasi dan Karakterisasi Bakteri Tanah Sawah di Kecamatan Medan Satria dan Bekasi Utara, Kota Bekasi, Jawa Barat

2017 ◽  
Vol 3 (4) ◽  
pp. 187 ◽  
Author(s):  
Arief Pambudi ◽  
Nita Noriko ◽  
Endah Permata Sari
Keyword(s):  
Plant Growth ◽  
Soil Bacteria ◽  
Rice Field ◽  
Plant Growth Promoting Rhizobacteria ◽  
Fertilizer Application ◽  
Rice Production ◽  
Production Costs ◽  
Soil Conditions ◽  
Nitrogen Fixation Activity ◽  
Growth Promoting

<p><em>Abstrak -</em><strong> </strong><strong>Produksi padi di Indonesia setiap tahun mengalami peningkatan, namun peningkatan ini belum mampu memenuhi kebutuhan nasional sehingga impor masih harus dilakukan. Salah satu masalah dalam produksi beras adalah penggunaan pupuk berlebih yang tidak hanya meningkatkan biaya produksi, namun juga merusak kondisi tanah. Aplikasi bakteri tanah sebagai Plant <em>Growth Promoting Rhizobacteria</em> (PGPR) dapat menjadi salah satu solusi terhadap masalah ini. Penelitian ini bertujuan untuk mengisolasi bakteri tanah dari 3 lokasi sawah daerah Bekasi, membandingkan keberadaan total bakteri pada ketiga lokasi tersebut,  dan melakukan karakterisasi isolat berdasarkan karakter yang dapat memicu pertumbuhan tanaman. Dari ketiga lokasi, diperoleh total 59 isolat dan 5 diantaranya berpotensi sebagai PGPR karena kemampuan fiksasi Nitrogen, melarutkan Fosfat, katalase positif, dan motil. Dari ketiga lokasi pengambilan sampel, BK1 memiliki jumlah total bakteri terendah karena aplikasi pemupukan dan pestisida berlebih yang ditandai tingginya kadar P total, serta tingginya residu klorpirifos, karbofuran, dan paration. Kondisi fisik tanah BK1 juga didominasi partikel liat yang menyebabkan tanah menjadi lebih padat. Peningkatan jumlah penggunaan pupuk tidak selalu diikuti peningkatan produktivitas tanaman.</strong></p><p> </p><p><strong><em>Kata Kunci</em></strong><strong><em> </em></strong>- <em>Bakteri tanah, Rhizosfer sawah, PGPR, Pupuk Hayati</em></p><p><strong> </strong></p><p><em>Abstract</em><strong> - </strong><strong>Rice production in Indonesia has increased annually, but this increase has not reached national demand,so imports still done. </strong><strong>One of the problems in rice production is the use of excessive fertilizers that not only increase production costs, but also decreased the soil conditions. The application of soil bacteria as Plant Growth Promoting Rhizobacteria (PGPR) can be the one solution to face this problem. The objective of this study was isolate soil bacteria from 3 locations of rice field in Bekasi, compare the total bacteria in the three locations, and characterize isolates based on the character that can promote plant growth. From three locations, a total of 59 isolates were obtained and 5 of them were potential as a PGPRs due to its Nitrogen fixation activity, Phosphate solubilization, positive catalase, and motility. From three sampling sites, BK1 has the lowest TPC value because of excessive  fertilizers and pesticides application which indicated by high total P levels, and also high chlorpyrifos, carbofuran and paration residues. The physical condition of BK1 soil is also dominated by clay particles which causes the soil more solid. Increasing of fertilizer application is not always followed by increased plant productivity.</strong></p><p><strong> </strong></p><p><strong><em>Keywords</em></strong> - <em>Biofertilizer, PGPR, Rice field rhizosphere, Soil Bacteria</em></p>

Biodegradation of organophosphorus Pollutants by Soil Bacteria: Biochemical Aspects and Unsolved Problems

2020 ◽  
Vol 36 (4) ◽  
pp. 126-135
Author(s):  
T.V. Shushkova ◽  
D.O. Epiktetov ◽  
S.V. Tarlachkov ◽  
I.T. Ermakova ◽  
A.A. Leontievskii
Keyword(s):  
Genome Sequencing ◽  
Soil Bacteria ◽  
Activity Regulation ◽  
Bacterial Isolates ◽  
Bacterial Strains ◽  
Russian Science ◽  
Degrading Bacteria ◽  
Phosphorus Source ◽  
Glyphosate Herbicide ◽  
Enzymatic Pathways

The degradation of persistent organophosphorus pollutants have been studied in 6 soil bacterial isolates and in 3 bacterial strains adapted for utilization of glyphosate herbicide (GP) under laboratory conditions. Significant differences in the uptake of organophosphonates were found in taxonomically close strains possessing similar enzymatic pathways of catabolism of these compounds, which indicates the existence of unknown mechanisms of activity regulation of these enzymes. The effect of adaptation for GP utilization as a sole phosphorus source on assimilation rates of several other phosphonates was observed in studied bacteria. The newly found efficient stains provided up to 56% of GP decomposition after application to the soil in the laboratory. The unresolved problems of microbial GP metabolism and the trends for further research on the creation of reliable biologicals capable of decomposing organophosphonates in the environment are discussed. organophosphonates, glyphosate, biodegradation, bioremediation, C-P lyase, phosphonatase, degrading bacteria Investigation of phosphonatase and genome sequencing were supported by Russian Science Foundation Grant no. 18-074-00021.

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