scholarly journals Leveraging Wearable Sensors for Human Daily Activity Recognition with Stacked Denoising Autoencoders

Sensors ◽  
2020 ◽  
Vol 20 (18) ◽  
pp. 5114 ◽  
Author(s):  
Qin Ni ◽  
Zhuo Fan ◽  
Lei Zhang ◽  
Chris D. Nugent ◽  
Ian Cleland ◽  
...  
Keyword(s):  
Activity Recognition ◽  
Wearable Sensors ◽  
Multiple Sensors ◽  
Machine Learning Methods ◽  
Research Fields ◽  
Sit To Stand ◽  
Significant Performance ◽  
Conventional Machine ◽  
Public Datasets ◽  
Deep Learning Model

Activity recognition has received considerable attention in many research fields, such as industrial and healthcare fields. However, many researches about activity recognition have focused on static activities and dynamic activities in current literature, while, the transitional activities, such as stand-to-sit and sit-to-stand, are more difficult to recognize than both of them. Consider that it may be important in real applications. Thus, a novel framework is proposed in this paper to recognize static activities, dynamic activities, and transitional activities by utilizing stacked denoising autoencoders (SDAE), which is able to extract features automatically as a deep learning model rather than utilize manual features extracted by conventional machine learning methods. Moreover, the resampling technique (random oversampling) is used to improve problem of unbalanced samples due to relatively short duration characteristic of transitional activity. The experiment protocol is designed to collect twelve daily activities (three types) by using wearable sensors from 10 adults in smart lab of Ulster University, the experiment results show the significant performance on transitional activity recognition and achieve the overall accuracy of 94.88% on three types of activities. The results obtained by comparing with other methods and performances on other three public datasets verify the feasibility and priority of our framework. This paper also explores the effect of multiple sensors (accelerometer and gyroscope) to determine the optimal combination for activity recognition.

A Survey on Deep Learning for Human Activity Recognition

2022 ◽  
Vol 54 (8) ◽  
pp. 1-34
Author(s):  
Fuqiang Gu ◽  
Mu-Huan Chung ◽  
Mark Chignell ◽  
Shahrokh Valaee ◽  
Baoding Zhou ◽  
...  
Keyword(s):  
Deep Learning ◽  
Activity Recognition ◽  
Human Activity ◽  
Smart Home ◽  
State Of The Art ◽  
Human Activity Recognition ◽  
Learning Methods ◽  
Machine Learning Methods ◽  
Comprehensive Survey ◽  
Conventional Machine

Human activity recognition is a key to a lot of applications such as healthcare and smart home. In this study, we provide a comprehensive survey on recent advances and challenges in human activity recognition (HAR) with deep learning. Although there are many surveys on HAR, they focused mainly on the taxonomy of HAR and reviewed the state-of-the-art HAR systems implemented with conventional machine learning methods. Recently, several works have also been done on reviewing studies that use deep models for HAR, whereas these works cover few deep models and their variants. There is still a need for a comprehensive and in-depth survey on HAR with recently developed deep learning methods.

scholarly journals Predicting and characterizing a cancer dependency map of tumors with deep learning

2021 ◽  
Vol 7 (34) ◽  
pp. eabh1275
Author(s):  
Yu-Chiao Chiu ◽  
Siyuan Zheng ◽  
Li-Ju Wang ◽  
Brian S. Iskra ◽  
Manjeet K. Rao ◽  
...  
Keyword(s):  
Deep Learning ◽  
Cancer Cell Proliferation ◽  
Proof Of Concept ◽  
Loss Of Function ◽  
Machine Learning Methods ◽  
Genome Wide ◽  
Cancer Tumor ◽  
Conventional Machine ◽  
Deep Learning Model ◽  
Pan Cancer

Genome-wide loss-of-function screens have revealed genes essential for cancer cell proliferation, called cancer dependencies. It remains challenging to link cancer dependencies to the molecular compositions of cancer cells or to unscreened cell lines and further to tumors. Here, we present DeepDEP, a deep learning model that predicts cancer dependencies using integrative genomic profiles. It uses a unique unsupervised pretraining that captures unlabeled tumor genomic representations to improve the learning of cancer dependencies. We demonstrated DeepDEP’s improvement over conventional machine learning methods and validated the performance with three independent datasets. By systematic model interpretations, we extended the current dependency maps with functional characterizations of dependencies and a proof-of-concept in silico assay of synthetic essentiality. We applied DeepDEP to pan-cancer tumor genomics and built the first pan-cancer synthetic dependency map of 8000 tumors with clinical relevance. In summary, DeepDEP is a novel tool for investigating cancer dependency with rapidly growing genomic resources.

scholarly journals Ablation Analysis to Select Wearable Sensors for Classifying Standing, Walking, and Running

Sensors ◽  
2020 ◽  
Vol 21 (1) ◽  
pp. 194
Author(s):  
Sarah Gonzalez ◽  
Paul Stegall ◽  
Harvey Edwards ◽  
Leia Stirling ◽  
Ho Chit Siu
Keyword(s):  
Activity Recognition ◽  
Principal Components ◽  
Classification Accuracy ◽  
Wearable Sensors ◽  
Sensor Data ◽  
Machine Learning Techniques ◽  
Support Vector ◽  
Learning Techniques ◽  
Measurement Units ◽  
The Difference

The field of human activity recognition (HAR) often utilizes wearable sensors and machine learning techniques in order to identify the actions of the subject. This paper considers the activity recognition of walking and running while using a support vector machine (SVM) that was trained on principal components derived from wearable sensor data. An ablation analysis is performed in order to select the subset of sensors that yield the highest classification accuracy. The paper also compares principal components across trials to inform the similarity of the trials. Five subjects were instructed to perform standing, walking, running, and sprinting on a self-paced treadmill, and the data were recorded while using surface electromyography sensors (sEMGs), inertial measurement units (IMUs), and force plates. When all of the sensors were included, the SVM had over 90% classification accuracy using only the first three principal components of the data with the classes of stand, walk, and run/sprint (combined run and sprint class). It was found that sensors that were placed only on the lower leg produce higher accuracies than sensors placed on the upper leg. There was a small decrease in accuracy when the force plates are ablated, but the difference may not be operationally relevant. Using only accelerometers without sEMGs was shown to decrease the accuracy of the SVM.

scholarly journals Similarity Embedding Networks for Robust Human Activity Recognition

2021 ◽  
Vol 15 (6) ◽  
pp. 1-17
Author(s):  
Chenglin Li ◽  
Carrie Lu Tong ◽  
Di Niu ◽  
Bei Jiang ◽  
Xiao Zuo ◽  
...  
Keyword(s):  
Activity Recognition ◽  
Human Activity ◽  
Short Term Memory ◽  
Real Space ◽  
Human Activity Recognition ◽  
Sensor Data ◽  
Activity Data ◽  
Extensive Evaluation ◽  
Sensor Signals ◽  
Public Datasets

Deep learning models for human activity recognition (HAR) based on sensor data have been heavily studied recently. However, the generalization ability of deep models on complex real-world HAR data is limited by the availability of high-quality labeled activity data, which are hard to obtain. In this article, we design a similarity embedding neural network that maps input sensor signals onto real vectors through carefully designed convolutional and Long Short-Term Memory (LSTM) layers. The embedding network is trained with a pairwise similarity loss, encouraging the clustering of samples from the same class in the embedded real space, and can be effectively trained on a small dataset and even on a noisy dataset with mislabeled samples. Based on the learned embeddings, we further propose both nonparametric and parametric approaches for activity recognition. Extensive evaluation based on two public datasets has shown that the proposed similarity embedding network significantly outperforms state-of-the-art deep models on HAR classification tasks, is robust to mislabeled samples in the training set, and can also be used to effectively denoise a noisy dataset.

scholarly journals Improving Human Activity Recognition Performance by Data Fusion and Feature Engineering

Sensors ◽  
2021 ◽  
Vol 21 (3) ◽  
pp. 692
Author(s):  
Jingcheng Chen ◽  
Yining Sun ◽  
Shaoming Sun
Keyword(s):  
Feature Selection ◽  
Activity Recognition ◽  
Human Activity ◽  
Joint Angle ◽  
Recognition Performance ◽  
Wearable Sensors ◽  
Estimation Algorithm ◽  
Recognition System ◽  
Human Activity Recognition ◽  
Time Frequency

Human activity recognition (HAR) is essential in many health-related fields. A variety of technologies based on different sensors have been developed for HAR. Among them, fusion from heterogeneous wearable sensors has been developed as it is portable, non-interventional and accurate for HAR. To be applied in real-time use with limited resources, the activity recognition system must be compact and reliable. This requirement can be achieved by feature selection (FS). By eliminating irrelevant and redundant features, the system burden is reduced with good classification performance (CP). This manuscript proposes a two-stage genetic algorithm-based feature selection algorithm with a fixed activation number (GFSFAN), which is implemented on the datasets with a variety of time, frequency and time-frequency domain features extracted from the collected raw time series of nine activities of daily living (ADL). Six classifiers are used to evaluate the effects of selected feature subsets from different FS algorithms on HAR performance. The results indicate that GFSFAN can achieve good CP with a small size. A sensor-to-segment coordinate calibration algorithm and lower-limb joint angle estimation algorithm are introduced. Experiments on the effect of the calibration and the introduction of joint angle on HAR shows that both of them can improve the CP.

scholarly journals Optimization of C-to-G base editors with sequence context preference predictable by machine learning methods

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Tanglong Yuan ◽  
Nana Yan ◽  
Tianyi Fei ◽  
Jitan Zheng ◽  
Juan Meng ◽  
...  
Keyword(s):  
Machine Learning ◽  
High Efficiency ◽  
Codon Optimization ◽  
Sequence Context ◽  
Learning Methods ◽  
Specific Sequence ◽  
Uracil Dna Glycosylase ◽  
Base Editing ◽  
Machine Learning Methods ◽  
Deep Learning Model

AbstractEfficient and precise base editors (BEs) for C-to-G transversion are highly desirable. However, the sequence context affecting editing outcome largely remains unclear. Here we report engineered C-to-G BEs of high efficiency and fidelity, with the sequence context predictable via machine-learning methods. By changing the species origin and relative position of uracil-DNA glycosylase and deaminase, together with codon optimization, we obtain optimized C-to-G BEs (OPTI-CGBEs) for efficient C-to-G transversion. The motif preference of OPTI-CGBEs for editing 100 endogenous sites is determined in HEK293T cells. Using a sgRNA library comprising 41,388 sequences, we develop a deep-learning model that accurately predicts the OPTI-CGBE editing outcome for targeted sites with specific sequence context. These OPTI-CGBEs are further shown to be capable of efficient base editing in mouse embryos for generating Tyr-edited offspring. Thus, these engineered CGBEs are useful for efficient and precise base editing, with outcome predictable based on sequence context of targeted sites.

Sign in / Sign up

Export Citation Format

Share Document