scholarly journals A Deep-Learning Approach for Foot-Type Classification Using Heterogeneous Pressure Data

Sensors ◽  
2020 ◽  
Vol 20 (16) ◽  
pp. 4481
Author(s):  
Jonghyeok Chae ◽  
Young-Jin Kang ◽  
Yoojeong Noh
Keyword(s):  
Heterogeneous Data ◽  
Classification Model ◽  
Superior Performance ◽  
Foot Deformities ◽  
Pressure Data ◽  
K Nearest Neighbor ◽  
Foot Pressure ◽  
Foot Health ◽  
Analysis And Design ◽  
Foot Deformation

The human foot is easily deformed owing to the innate form of the foot or an incorrect walking posture. Foot deformations not only pose a threat to foot health but also cause fatigue and pain when walking; therefore, accurate diagnoses of foot deformations are required. However, the measurement of foot deformities requires specialized personnel, and the objectivity of the diagnosis may be insufficient for professional medical personnel to assess foot deformations. Thus, it is necessary to develop an objective foot deformation classification model. In this study, a model for classifying foot types is developed using image and numerical foot pressure data. Such heterogeneous data are used to generate a fine-tuned visual geometry group-16 (VGG16) and K−nearest neighbor (k-NN) models, respectively, and a stacking ensemble model is finally generated to improve accuracy and robustness by combining the two models. Through k-fold cross-validation, the accuracy and robustness of the proposed method have been verified by the mean and standard deviation of the f1 scores (0.9255 and 0.0042), which has superior performance compared to single models generated using only numerical or image data. Thus, the proposed model provides the objectivity of diagnosis for foot deformation, and can be used for analysis and design of foot healthcare products.

scholarly journals Foot function and strength of patients with diabetes grouped by ulcer risk classification (IWGDF)

2019 ◽  
Vol 11 (1) ◽  
Author(s):  
Jane S. S. P. Ferreira ◽  
João P. Panighel ◽  
Érica Q. Silva ◽  
Renan L. Monteiro ◽  
Ronaldo H. Cruvinel Júnior ◽  
...  
Keyword(s):  
Treatment Strategies ◽  
Foot Deformities ◽  
Diabetic Patients ◽  
Foot Pain ◽  
Foot Health ◽  
Significant Difference ◽  
Patients With Diabetes ◽  
Foot Function ◽  
Group 2 ◽  
Stratification System

Abstract Background The stratification system from the International Working Group on the Diabetic Foot (IWGDF) was used to classify the participants as to the ulcer risk. However, it is not yet known what the classification groups’ individual deficits are regarding sensitivity, function, and musculoskeletal properties and mechanics. This makes it difficult to design proper ulcer prevention strategies for patients. Thus, this study aimed to investigate the foot function, foot strength and health of people with diabetes mellitus (DM)—with or without DPN—while considering the different ulcer risk classifications determined by the IWGDF. Methods The subject pool comprised 72 people with DM, with and without DPN. The patients were divided into three groups: Group 0 (G0), which comprised diabetic patients without DPN; Group 1 (G1), which comprised patients with DPN; and Group 2 (G2), which comprised patients with DPN who had foot deformities. The health and foot function of the subjects’ feet were assessed using a foot health status questionnaire (FHSQ-BR) that investigated four domains: foot pain, foot function, footwear, and general foot health. The patients’ foot strength was evaluated using the maximum force under each subject’s hallux and toes on a pressure platform (emed q-100, Novel, Munich, Germany). Results Moderate differences were found between G0 and G1 and G2 for the foot pain, foot function, general foot health, and footwear. There was also a small but significant difference between G0 and G2 in regards to hallux strength. Conclusion Foot health, foot function and strength levels of people with DM and DPN classified by the ulcer risk are different and this must be taken into account when evaluating and developing treatment strategies for these patients.

mAHTPred: a sequence-based meta-predictor for improving the prediction of anti-hypertensive peptides using effective feature representation

2018 ◽  
Vol 35 (16) ◽  
pp. 2757-2765 ◽  
Author(s):  
Balachandran Manavalan ◽  
Shaherin Basith ◽  
Tae Hwan Shin ◽  
Leyi Wei ◽  
Gwang Lee
Keyword(s):  
Nearest Neighbor ◽  
Feature Representation ◽  
Superior Performance ◽  
Supplementary Information ◽  
Gradient Boosting ◽  
Support Vector ◽  
Pharmaceutical Drugs ◽  
K Nearest Neighbor ◽  
Feature Descriptors ◽  
Predicted Probability

AbstractMotivationCardiovascular disease is the primary cause of death globally accounting for approximately 17.7 million deaths per year. One of the stakes linked with cardiovascular diseases and other complications is hypertension. Naturally derived bioactive peptides with antihypertensive activities serve as promising alternatives to pharmaceutical drugs. So far, there is no comprehensive analysis, assessment of diverse features and implementation of various machine-learning (ML) algorithms applied for antihypertensive peptide (AHTP) model construction.ResultsIn this study, we utilized six different ML algorithms, namely, Adaboost, extremely randomized tree (ERT), gradient boosting (GB), k-nearest neighbor, random forest (RF) and support vector machine (SVM) using 51 feature descriptors derived from eight different feature encodings for the prediction of AHTPs. While ERT-based trained models performed consistently better than other algorithms regardless of various feature descriptors, we treated them as baseline predictors, whose predicted probability of AHTPs was further used as input features separately for four different ML-algorithms (ERT, GB, RF and SVM) and developed their corresponding meta-predictors using a two-step feature selection protocol. Subsequently, the integration of four meta-predictors through an ensemble learning approach improved the balanced prediction performance and model robustness on the independent dataset. Upon comparison with existing methods, mAHTPred showed superior performance with an overall improvement of approximately 6–7% in both benchmarking and independent datasets.Availability and implementationThe user-friendly online prediction tool, mAHTPred is freely accessible at http://thegleelab.org/mAHTPred.Supplementary informationSupplementary data are available at Bioinformatics online.

scholarly journals Graph Convolutional Network and Convolutional Neural Network Based Method for Predicting lncRNA-Disease Associations

Cells ◽  
2019 ◽  
Vol 8 (9) ◽  
pp. 1012 ◽  
Author(s):  
Xuan ◽  
Pan ◽  
Zhang ◽  
Liu ◽  
Sun
Keyword(s):  
Neural Network ◽  
Convolutional Neural Network ◽  
Heterogeneous Network ◽  
Heterogeneous Data ◽  
Superior Performance ◽  
Convolutional Network ◽  
Topological Information ◽  
Disease Pair ◽  
Disease Associations ◽  
The Right

Aberrant expressions of long non-coding RNAs (lncRNAs) are often associated with diseases and identification of disease-related lncRNAs is helpful for elucidating complex pathogenesis. Recent methods for predicting associations between lncRNAs and diseases integrate their pertinent heterogeneous data. However, they failed to deeply integrate topological information of heterogeneous network comprising lncRNAs, diseases, and miRNAs. We proposed a novel method based on the graph convolutional network and convolutional neural network, referred to as GCNLDA, to infer disease-related lncRNA candidates. The heterogeneous network containing the lncRNA, disease, and miRNA nodes, is constructed firstly. The embedding matrix of a lncRNA-disease node pair was constructed according to various biological premises about lncRNAs, diseases, and miRNAs. A new framework based on a graph convolutional network and a convolutional neural network was developed to learn network and local representations of the lncRNA-disease pair. On the left side of the framework, the autoencoder based on graph convolution deeply integrated topological information within the heterogeneous lncRNA-disease-miRNA network. Moreover, as different node features have discriminative contributions to the association prediction, an attention mechanism at node feature level is constructed. The left side learnt the network representation of the lncRNA-disease pair. The convolutional neural networks on the right side of the framework learnt the local representation of the lncRNA-disease pair by focusing on the similarities, associations, and interactions that are only related to the pair. Compared to several state-of-the-art prediction methods, GCNLDA had superior performance. Case studies on stomach cancer, osteosarcoma, and lung cancer confirmed that GCNLDA effectively discovers the potential lncRNA-disease associations.

scholarly journals Analysis and Prediction of CET4 Scores Based on Data Mining Algorithm

Complexity ◽  
2021 ◽  
Vol 2021 ◽  
pp. 1-11
Author(s):  
Hongyan Wang
Keyword(s):  
Data Mining ◽  
Linear Regression ◽  
Test Score ◽  
Nearest Neighbor ◽  
Classification Model ◽  
Data Mining Algorithm ◽  
K Nearest Neighbor ◽  
Nearest Neighbor Algorithm ◽  
K Nearest Neighbor Algorithm ◽  
Classification Efficiency

This paper presents the concept and algorithm of data mining and focuses on the linear regression algorithm. Based on the multiple linear regression algorithm, many factors affecting CET4 are analyzed. Ideas based on data mining, collecting history data and appropriate to transform, using statistical analysis techniques to the many factors influencing the CET-4 test were analyzed, and we have obtained the CET-4 test result and its influencing factors. It was found that the linear regression relationship between the degrees of fit was relatively high. We further improve the algorithm and establish a partition-weighted K-nearest neighbor algorithm. The K-weighted K nearest neighbor algorithm and the partition algorithm are used in the CET-4 test score classification prediction, and the statistical method is used to study the relevant factors that affect the CET-4 test score, and screen classification is performed to predict when the comparison verification will pass. The weight K of the input feature and the adjacent feature are weighted, although the allocation algorithm of the adjacent classification effect has not been significantly improved, but the stability classification is better than K-nearest neighbor algorithm, its classification efficiency is greatly improved, classification time is greatly reduced, and classification efficiency is increased by 119%. In order to detect potential risk graduating students earlier, this paper proposes an appropriate and timely early warning and preschool K-nearest neighbor algorithm classification model. Taking test scores or make-up exams and re-learning as input features, the classification model can effectively predict ordinary students who have not graduated.

Feature Selection Method for Hydraulic System Faults Diagnosis Based on GA-PLS

2010 ◽  
Vol 44-47 ◽  
pp. 1130-1134
Author(s):  
Sheng Li ◽  
Pei Lin Zhang ◽  
Bing Li
Keyword(s):  
Feature Selection ◽  
Hydraulic System ◽  
Nearest Neighbor ◽  
Feature Selection Method ◽  
Original Data ◽  
Selection Method ◽  
Classification Model ◽  
K Nearest Neighbor ◽  
K Nearest Neighbor Algorithm ◽  
Faults Diagnosis

Feature selection is a key step in hydraulic system fault diagnosis. Some of the collected features are unrelated to classification model, and some are high correlated to other features. These features are harmful for establishing classification model. In order to solve this problem, genetic algorithm-partial least squares (GA-PLS) is proposed for selecting the representative and optimal features. K nearest neighbor algorithm (KNN) is used for diagnosing and classifying hydraulic system faults. For expressing better performance of GA-PLS, the original data of a model engineering hydraulic system is used, and the results of GA-PLS are compared with all feature used and GA. The experimental results show that, the proposed feature method can diagnose and classify hydraulic system faults more efficiently with using fewer features.

First-Break Picking Classification Models Using Recurrent Neural Network

2021 ◽  
Author(s):  
Mohammed Ayub ◽  
SanLinn Kaka
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Deep Neural Network ◽  
Contextual Information ◽  
Classification Model ◽  
Superior Performance ◽  
Learning Models ◽  
Neural Network Models ◽  
Minimum Number ◽  
Machine Learning Models

Abstract Manual first-break picking from a large volume of seismic data is extremely tedious and costly. Deployment of machine learning models makes the process fast and cost effective. However, these machine learning models require high representative and effective features for accurate automatic picking. Therefore, First- Break (FB) picking classification model that uses effective minimum number of features and promises performance efficiency is proposed. The variants of Recurrent Neural Networks (RNNs) such as Long ShortTerm Memory (LSTM) and Gated Recurrent Unit (GRU) can retain contextual information from long previous time steps. We deploy this advantage for FB picking as seismic traces are amplitude values of vibration along the time-axis. We use behavioral fluctuation of amplitude as input features for LSTM and GRU. The models are trained on noisy data and tested for generalization on original traces not seen during the training and validation process. In order to analyze the real-time suitability, the performance is benchmarked using accuracy, F1-measure and three other established metrics. We have trained two RNN models and two deep Neural Network models for FB classification using only amplitude values as features. Both LSTM and GRU have the accuracy and F1-measure with a score of 94.20%. With the same features, Convolutional Neural Network (CNN) has an accuracy of 93.58% and F1-score of 93.63%. Again, Deep Neural Network (DNN) model has scores of 92.83% and 92.59% as accuracy and F1-measure, respectively. From the pexperiment results, we see significant superior performance of LSTM and GRU to CNN and DNN when used the same features. For robustness of LSTM and GRU models, the performance is compared with DNN model that is trained using nine features derived from seismic traces and observed that the performance superiority of RNN models. Therefore, it is safe to conclude that RNN models (LSTM and GRU) are capable of classifying the FB events efficiently even by using a minimum number of features that are not computationally expensive. The novelty of our work is the capability of automatic FB classification with the RNN models that incorporate contextual behavioral information without the need for sophisticated feature extraction or engineering techniques that in turn can help in reducing the cost and fostering classification model robust and faster.

Classification of fish species from different ecosystems using the near infrared diffuse reflectance spectra of otoliths

2020 ◽  
Vol 28 (4) ◽  
pp. 224-235
Author(s):  
Irina M Benson ◽  
Beverly K Barnett ◽  
Thomas E Helser
Keyword(s):  
Discriminant Analysis ◽  
Spatial Variability ◽  
Near Infrared ◽  
Nir Spectroscopy ◽  
Principal Component ◽  
Classification Model ◽  
Support Vector ◽  
Otolith Chemistry ◽  
K Nearest Neighbor ◽  
Fisheries Science

Applications of Fourier transform near infrared (FT-NIR) spectroscopy in fisheries science are currently limited. This current analysis of otolith spectral data demonstrate the potential applicability of FT-NIR spectroscopy to otolith chemistry and spatial variability in fisheries science. The objective of this study was to examine the use of NIR spectroscopy as a tool to differentiate among marine fishes in four large marine ecosystems. We examined otoliths from 13 different species, with three of these species coming from different regions. Principal component analysis described the main directions along which the specimens were separated. The separation of species and their ecosystems may suggest interactions between fish phylogeny, ontogeny, and environmental conditions that can be evaluated using NIR spectroscopy. In order to discriminate spectra across ecosystems and species, four supervised classification model techniques were utilized: soft independent modelling of class analogies, support vector machine discriminant analysis, partial least squares discriminant analysis, and k-nearest neighbor analysis (KNN). This study showed that the best performing model to classify combined ecosystems, all four ecosystems, and species was the KNN model, which had an overall accuracy rate of 99.9%, 97.6%, and 91.5%, respectively. Results from this study suggest that further investigations are needed to determine applications of NIR spectroscopy to otolith chemistry and spatial variability.

scholarly journals Efficient Shared Execution Processing of k-Nearest Neighbor Joins in Road Networks

2018 ◽  
Vol 2018 ◽  
pp. 1-17 ◽  
Author(s):  
Hyung-Ju Cho
Keyword(s):  
Euclidean Distance ◽  
Nearest Neighbor ◽  
Real Life ◽  
Road Networks ◽  
Nearest Neighbors ◽  
Superior Performance ◽  
K Nearest Neighbor ◽  
Wide Range ◽  
Primitive Operation ◽  
Nested Loop

We investigate the k-nearest neighbor (kNN) join in road networks to determine the k-nearest neighbors (NNs) from a dataset S to every object in another dataset R. The kNN join is a primitive operation and is widely used in many data mining applications. However, it is an expensive operation because it combines the kNN query and the join operation, whereas most existing methods assume the use of the Euclidean distance metric. We alternatively consider the problem of processing kNN joins in road networks where the distance between two points is the length of the shortest path connecting them. We propose a shared execution-based approach called the group-nested loop (GNL) method that can efficiently evaluate kNN joins in road networks by exploiting grouping and shared execution. The GNL method can be easily implemented using existing kNN query algorithms. Extensive experiments using several real-life roadmaps confirm the superior performance and effectiveness of the proposed method in a wide range of problem settings.

scholarly journals An Investigation of Insider Threat Mitigation Based on EEG Signal Classification

Sensors ◽  
2020 ◽  
Vol 20 (21) ◽  
pp. 6365
Author(s):  
Jung Hwan Kim ◽  
Chul Min Kim ◽  
Man-Sung Yim
Keyword(s):  
Nearest Neighbor ◽  
Nuclear Industry ◽  
Classification Model ◽  
Support Vector ◽  
Insider Threat ◽  
K Nearest Neighbor ◽  
Eeg Signals ◽  
Nuclear Facilities ◽  
Time Frequency ◽  
Threat Mitigation

This study proposes a scheme to identify insider threats in nuclear facilities through the detection of malicious intentions of potential insiders using subject-wise classification. Based on electroencephalography (EEG) signals, a classification model was developed to identify whether a subject has a malicious intention under scenarios of being forced to become an insider threat. The model also distinguishes insider threat scenarios from everyday conflict scenarios. To support model development, 21-channel EEG signals were measured on 25 healthy subjects, and sets of features were extracted from the time, time–frequency, frequency and nonlinear domains. To select the best use of the available features, automatic selection was performed by random-forest-based algorithms. The k-nearest neighbor, support vector machine with radial kernel, naïve Bayes, and multilayer perceptron algorithms were applied for the classification. By using EEG signals obtained while contemplating becoming an insider threat, the subject-wise model identified malicious intentions with 78.57% accuracy. The model also distinguished insider threat scenarios from everyday conflict scenarios with 93.47% accuracy. These findings could be utilized to support the development of insider threat mitigation systems along with existing trustworthiness assessments in the nuclear industry.

scholarly journals Transfer Learning-Based Search Model for Hot Pepper Diseases and Pests

Agriculture ◽  
2020 ◽  
Vol 10 (10) ◽  
pp. 439 ◽  
Author(s):  
Helin Yin ◽  
Yeong Hyeon Gu ◽  
Chang-Jin Park ◽  
Jong-Han Park ◽  
Seong Joon Yoo
Keyword(s):  
Nearest Neighbor ◽  
Image Data ◽  
Performance Comparison ◽  
Classification Model ◽  
Search Model ◽  
Hot Pepper ◽  
Final Decision ◽  
Image Search ◽  
K Nearest Neighbor ◽  
Search Results

The use of conventional classification techniques to recognize diseases and pests can lead to an incorrect judgment on whether crops are diseased or not. Additionally, hot pepper diseases, such as “anthracnose” and “bacterial spot” can be erroneously judged, leading to incorrect disease recognition. To address these issues, multi-recognition methods, such as Google Cloud Vision, suggest multiple disease candidates and allow the user to make the final decision. Similarity-based image search techniques, along with multi-recognition, can also be used for this purpose. Content-based image retrieval techniques have been used in several conventional similarity-based image searches, using descriptors to extract features such as the image color and edge. In this study, we use eight pre-trained deep learning models (VGG16, VGG19, Resnet 50, etc.) to extract the deep features from images. We conducted experiments using 28,011 image data of 34 types of hot pepper diseases and pests. The search results for diseases and pests were similar to query images with deep features using the k-nearest neighbor method. In top-1 to top-5, when using the deep features based on the Resnet 50 model, we achieved recognition accuracies of approximately 88.38–93.88% for diseases and approximately 95.38–98.42% for pests. When using the deep features extracted from the VGG16 and VGG19 models, we recorded the second and third highest performances, respectively. In the top-10 results, when using the deep features extracted from the Resnet 50 model, we achieved accuracies of 85.6 and 93.62% for diseases and pests, respectively. As a result of performance comparison between the proposed method and the simple convolutional neural network (CNN) model, the proposed method recorded 8.62% higher accuracy in diseases and 14.86% higher in pests than the CNN classification model.

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