scholarly journals Thermal Analysis of a Disposable, Instrument-Free DNA Amplification Lab-on-a-Chip Platform

Sensors ◽  
2018 ◽  
Vol 18 (6) ◽  
pp. 1812 ◽  
Author(s):  
Tamás Pardy ◽  
Toomas Rang ◽  
Indrek Tulp
2016 ◽  
Vol 128 (8) ◽  
pp. 2649-2649 ◽  
Author(s):  
Meng Liu ◽  
Christy Y. Hui ◽  
Qiang Zhang ◽  
Jimmy Gu ◽  
Balamurali Kannan ◽  
...  

2016 ◽  
Vol 55 (8) ◽  
pp. 2603-2603
Author(s):  
Meng Liu ◽  
Christy Y. Hui ◽  
Qiang Zhang ◽  
Jimmy Gu ◽  
Balamurali Kannan ◽  
...  

2016 ◽  
Vol 128 (8) ◽  
pp. 2759-2763 ◽  
Author(s):  
Meng Liu ◽  
Christy Y. Hui ◽  
Qiang Zhang ◽  
Jimmy Gu ◽  
Balamurali Kannan ◽  
...  

2021 ◽  
Author(s):  
Qinghua Jiang ◽  
Shuzhen Yue ◽  
Kaixin Yu ◽  
Tian Tian ◽  
Jian Zhang ◽  
...  

Abstract BackgroundSmall interfering RNA (siRNA) has emerged as a kind of promising therapeutic agents for cancer therapy. However, the off-target effect and degradation are the main challenges for siRNAs delivery. Herein, an enzyme-free DNA amplification strategy initiated by a specific endogenous microRNA has been developed for in situ generation of siRNAs with enhanced gene therapy effect on cervical carcinoma.MethodsThis strategy contains three DNA hairpins (H1, H2/PS and H3) which can be triggered by microRNA-21 (miR-21) for self-assembly of DNA nanowheels (DNWs). Notably, this system is consistent with the operation of a DNA logic circuitry containing cascaded “AND” gates with feedback mechanism. Accordingly, a versatile biosensing and bioimaging platform is fabricated for sensitive and specific analysis of miR-21 in HeLa cells via fluorescence resonance energy transfer (FRET). Meanwhile, since the vascular endothelial growth factor (VEGF) antisense and sense sequences are encoded in hairpin reactants, the performance of this DNA circuit leads to in situ assembly of VEGF siRNAs in DNWs, which can be specifically recognized and cleaved by Dicer for gene therapy of cervical carcinoma. ResultsThe proposed isothermal amplification approach exhibits high sensitivity for miR-21 with a detection limit of 0.25 pM and indicates excellent specificity to discriminate target miR-21 from the single-base mismatched sequence. Furthermore, this strategy achieves accurate and sensitive imaging analysis of the expression and distribution of miR-21 in different living cells. To note, compared to naked siRNAs alone, in situ siRNA generation shows a significantly enhanced gene silencing and anti-tumor effect due to the high reaction efficiency of DNA circuit and improved delivery stability of siRNAs.ConclusionThe endogenous miRNA-activated DNA circuit provides an exciting opportunity to construct a general nanoplatform for precise cancer diagnosis and efficient gene therapy, which has an important significance in clinical translation.


2015 ◽  
Vol 87 (23) ◽  
pp. 11714-11720 ◽  
Author(s):  
Yifan Lv ◽  
Liang Cui ◽  
Ruizi Peng ◽  
Zilong Zhao ◽  
Liping Qiu ◽  
...  

2017 ◽  
Vol 41 (4) ◽  
Author(s):  
Ana B. Rodríguez-Martínez ◽  
Esther Sarasola-Díez ◽  
Estíbaliz Achalandabaso ◽  
María J. García-Barcina

AbstractBackground:Circulating free DNA (cfDNA) digestion with methylation sensitive restriction enzymes constitutes an important diagnostic tool for differentiating methylated from non-methylated DNA sequences. In the context of pregnancy, this is used to differentiate fetal from maternal DNA. Current protocols are of long duration and use multiple enzymes with different incubation and inactivating temperatures. We describe a short protocol for the digestion of circulating free DNA focused on its future adaptation to miniaturized microfluidic devices based on lab-on-a-chip technology.Methods:cfDNA was extracted from plasma samples of pregnant and non-pregnant women with chemagic Viral NA/gDNA and QIAamp circulating nucleic acids kits. For digestion protocol optimization, different methylation sensitive and insensitive restriction enzymes were used. Detection ofResults:The digestion protocol is optimized to a 3.5 h one-step protocol using the enzymes BstUI, BstY1 and HhaI resulting in a complete digestion of the hypomethylated maternalConclusions:This work provides a digestion protocol for cfDNA samples with a combination of temperatures (37 °C and 60 °C) and a protocol length (<4 h) which facilitates its adaptation to miniaturized microfluidic devices based on lab-on-a-chip technology. In this technology, the shorter the duration of the protocol, the greater the rate of success and the less sample evaporation.


2006 ◽  
Vol 77 (9) ◽  
pp. 094301 ◽  
Author(s):  
V. Raghavan ◽  
Scott E. Whitney ◽  
Ryan J. Ebmeier ◽  
Nisha V. Padhye ◽  
Michael Nelson ◽  
...  

Author(s):  
Junqing Wu ◽  
Gaurav Soni ◽  
Dazhi Wang ◽  
Carl D. Meinhart

We have developed micropumps for microfluidics that use AC electric fields to drive aqueous fluid motion through micro channels. These pumps operate at relatively low voltages (~5–10Vrms), and high frequencies (~100kHz). They have several distinct advantages over the DC electrokinetic pumps. The low voltages make the pumps well suited for a wide variety of biosensor and “Lab-on-a-Chip” applications (e.g. PCR chip for DNA amplification). The high frequencies minimize electrolysis, so that bubbles do not form on the electrode surfaces, and do not contaminate the working fluid. The pumps can also be used as active valves or precision micro-dispensers.


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