scholarly journals Comparison of Empirical and Physical Modelling for Estimation of Biochemical and Biophysical Vegetation Properties: Field Scale Analysis across an Arctic Bioclimatic Gradient

2020 ◽  
Vol 12 (18) ◽  
pp. 3073
Author(s):  
Blair E. Kennedy ◽  
Douglas J. King ◽  
Jason Duffe

To evaluate the potential of multi-angle hyperspectral sensors for monitoring vegetation variables in Arctic environments, empirical and physical modelling using field data was implemented for the retrieval of leaf and canopy chlorophyll content (LCC, CCC) and plant area index (PAI) measured at four sites situated across a bioclimatic gradient in the Western Canadian Arctic. Field reflectance data were acquired with an ASD FieldSpec (305–1075 nm) and used to simulate CHRIS Mode1 spectra (411–997 nm). Multi-angle measurements were taken corresponding to CHRIS view zenith angles (VZA) (−55°, −36°, 0°, +36°, +55°). Empirical modelling compared parametric regression based on vegetation indices (VIs) to non-parametric Gaussian Processes Regression (GPR). In physical modelling, PROSAIL was inverted using numerical optimization and look-up table (LUT) approaches. Cross-validation of the empirical models ranked GPR as best, followed by simple ratio (SR) with optimally selected NIR and red wavelengths, and then ROSAVI using its published wavelengths (mean r2cv = 0.62, 0.58, and 0.54, respectively across all sites, variables, and VZAs). However, the best predictive performance was achieved by SR followed by GPR and ROSAVI (NRMSEcv = 0.12, 0.16, 0.16, respectively). PROSAIL simulated the multi-angle top-of-canopy reflectance well with numerical optimization (r2 = ~0.99, RMSE = 0.004 ± 0.002), but best performing LUT models of LCC, CCC and PAI were poorer than the empirical approaches (mean r2 = 0.48, mean NRMSE = 0.22). PROSAIL performed best at the high Arctic sparsely vegetated site (r2 = 0.57–0.86 for all parameters). Overall, the best performing VZA was −55° for empirical modelling and 0° and ±55° for physical modelling; however, these were not significantly better than the other VZAs. Overall, this study demonstrates that, for Arctic vegetation, nadir narrowband reflectance data used to derive simple empirical VIs with optimally selected bands is a more efficient approach for modelling chlorophyll and PAI than more complex empirical and physical approaches.

2021 ◽  
Vol 13 (9) ◽  
pp. 1830
Author(s):  
Blair E. Kennedy ◽  
Doug J. King ◽  
Jason Duffe

Mapping and monitoring of Arctic vegetation biochemical and biophysical properties is gaining importance as global climate change is disproportionately affecting this region. Previous studies using remote sensing to model Arctic vegetation biochemical and biophysical properties have generally involved empirical modelling with nadir looking broadband sensors and have typically been conducted at the field scale in one study area. Satellite hyperspectral remote sensing has not been previously investigated for retrieving leaf and canopy biochemical and biophysical properties of Arctic vegetation across multiple sites using either empirical or physically-based modelling approaches. Furthermore, multi-angle hyperspectral sensors (CHRIS/PROBA), which can provide insight into vegetation reflectance anisotropy and potentially improve vegetation parameter estimation, have also not been investigated for this purpose. In this study, three modelling approaches previously investigated with field spectroscopy data (Kennedy et al., 2020) were used with CHRIS Mode-1 imagery to predict leaf chlorophyll content, plant area index and canopy chlorophyll content across a bioclimatic gradient in the Western Canadian Arctic. Modelling approaches included: parametric linear regression based on vegetation indices (VI), non-parametric machine learning Gaussian processes regression (GPR) and inversion of the PROSAIL radiative transfer model using a look-up table approach (LUT). CHRIS imagery was acquired with −55°, −36°, 0°, +36°, +55° view zenith angles (VZA) between 2011 and 2014 over three field sites extending from the Richardson Mountains in central Yukon, Canada to the north end of Banks Island, Northwest Territories, Canada. Field measurements were acquired within several weeks of satellite acquisitions. GPR had the best model fit (mean cross-validated (cv) coefficient of determination, r2cv = 0.61 across all vegetation variables, sites and VZAs vs. 0.59 for the simple ratio, SR) and predictive performance (normalized root mean square error, NRMSEcv = 0.13 vs. 0.14 for SR). The revised optimized soil adjusted VI (ROSAVI) performance was slightly poorer (r2cv = 0.51; NRMSEcv = 0.15). The physically-based PROSAIL model performed poorer than all empirical models (r2 = 0.50; NRMSE = 0.18). This ranking of model performance is similar to that found in the previous field spectroscopy study, where empirical model fits and predictive performance were only slightly worse. With respect to view angle performance, NRMSE varied only slightly, indicating no distinct advantage for any one VZA. Overall, strong potential has been demonstrated for empirical modelling of Arctic vegetation chlorophyll and plant area index using hyperspectral data combined with band selection/optimization procedures in the Arctic. Recently launched and future hyperspectral satellites, including next generation airborne sensors, will likely provide improvements to the model performance reported here.


2014 ◽  
Vol 6 (7) ◽  
pp. 6266-6282 ◽  
Author(s):  
Flávio Ponzoni ◽  
Clayton Silva ◽  
Sandra Santos ◽  
Otávio Montanher ◽  
Thiago Santos

Author(s):  
D. Ratha ◽  
D. Mandal ◽  
S. Dey ◽  
A. Bhattacharya ◽  
A. Frery ◽  
...  

Abstract. In this paper, we present two radar vegetation indices for full-pol and compact-pol SAR data, respectively. Both are derived using the notion of a geodesic distance between observation and well-known scattering models available in the literature. While the full-pol version depends on a generalized volume scattering model, the compact-pol version uses the ideal depolariser to model the randomness in the vegetation. We have utilized the RADARSAT Constellation Mission (RCM) time-series data from the SAMPVEX16-MB campaign in the Manitoba region of Canada for comparing and assessing the indices in terms of the change in the biophysical parameters as well. The compact-pol data for comparison is simulated from the full-pol RCM time series. Both the indices show better performance at correlating with biophysical parameters such as Plant Area Index (PAI) and Volumetric Water Content (VWC) for wheat and soybean crops, in comparison to the state-of-art Radar Vegetation Index (RVI) of Kim and van Zyl. These indices are timely for the upcoming release of the data from the RCM, which will provide data in both full and compact-pol modes, aimed at better crop monitoring from space.


2020 ◽  
Vol 12 (12) ◽  
pp. 1979
Author(s):  
Dandan Xu ◽  
Deshuai An ◽  
Xulin Guo

Leaf area index (LAI) is widely used for algorithms and modelling in the field of ecology and land surface processes. At a global scale, normalized difference vegetation index (NDVI) products generated by different remote sensing satellites, have provided more than 40 years of time series data for LAI estimation. NDVI saturation issues are reported in agriculture and forest ecosystems at high LAI values, creating a challenge when using NDVI to estimate LAI. However, NDVI saturation is not reported on LAI estimation in grasslands. Previous research implies that non-photosynthetic vegetation (NPV) reduces the accuracy of LAI estimation from NDVI and other vegetation indices. A question arises: is the absence of NDVI saturation in grasslands a result of low LAI value, or is it caused by NPV? This study aims to explore whether there is an NDVI saturation issue in mixed grassland, and how NPV may influence LAI estimation by NDVI. In addition, in-situ measured plant area index (PAI) by sensors that detect light interception through the vegetation canopy (e.g., Li-cor LAI-2000), the most widely used field LAI collection method, might create bias in LAI estimation or validation using NDVI. Thus, this study also aims to quantify the contribution of green vegetation (GV) and NPV on in-situ measured PAI. The results indicate that NDVI saturation (using the portion of NDVI only contributed by GV) exists in grassland at high LAI (LAI threshold is much lower than that reported for other ecosystems in the literature), and that the presence of NPV can override the saturation effects of NDVI used to estimate green LAI. The results also show that GV and NPV in mixed grassland explain, respectively, the 60.33% and 39.67% variation of in-situ measured PAI by LAI-2000.


2018 ◽  
Vol 2018 ◽  
pp. 1-11
Author(s):  
Na’eem Hoosen Agjee ◽  
Onisimo Mutanga ◽  
Michael Gebreselasie ◽  
Riyad Ismail

Water hyacinth (Eichhornia crassipes) is an exotic plant species that is effectively controlled byNeochetinaspp. weevils. This study is aimed at determining if spectroscopic data may be utilized to predict insect-induced stress on water hyacinth plants. Single target regression trees (STRTs), multitarget regression trees (MTRTs), and random forest multitarget regression trees (RF-MTRTs) have been used to predict feeding scar damage (FSD) and relative leaf chlorophyll content (RLCC) from hyperspectral canopy reflectance data. Results from this study show that the correlation coefficient of STRTs (training accuracy: 76%–97%; validation accuracy: 47%–86%) performs better than MTRTs (training accuracy: 74%–90%; validation accuracy: 45%–77%) for all infestation levels but are difficult to interpret simultaneously. In contrast, MTRTs (size: 23–35 nodes) are much smaller and more interpretable than STRTs (size: 11–47 nodes) because they predict FSD and RLCC simultaneously. Importantly, RF-MTRTs (training accuracy: 95%–98%; validation accuracy: 55%–88%) yield better predictive performance than STRTs and MTRTs for all infestation levels. It is concluded that MTRTs can be utilized for model interpretation as they are more interpretable; however, RF-MTRTs offer an improved predictive performance.


Author(s):  
Lijuan Wang ◽  
Guimin Zhang ◽  
Hui Lin ◽  
Liang Liang ◽  
Zheng Niu

The Normalized Difference Vegetation Index (NDVI) is widely used for Leaf Area Index (LAI) estimation. It is well documented that the NDVI is extremely subject to the saturation problem when LAI reaches a high value. A new multi-angular vegetation index, the Hotspot-darkspot Difference Vegetation Index (HDVI) is proposed to estimate the high density LAI. The HDVI, defined as the difference between the hot and dark spot NDVI, relative to the dark spot NDVI, was proposed based on the Analytical two-layer Canopy Reflectance Model (ACRM) model outputs. This index is validated using both in situ experimental data in wheat and data from the multi-angular optical Compact High-Resolution Imaging Spectrometer (CHRIS) satellite. Both indices, the Hotspot-Darkspot Index (HDS) and the NDVI were also selected to analyze the relationship with LAI, and were compared with new index HDVI. The results show that HDVI is an appropriate proxy of LAI with higher determination coefficients (R2) for both the data from the in situ experiment (R2=0.7342, RMSE=0.0205) and the CHRIS data (R2=0.7749, RMSE=0.1013). Our results demonstrate that HDVI can make better the occurrence of saturation limits with the information of multi-angular observation, and is more appropriate for estimating LAI than either HDS or NDVI at high LAI values. Although the new index needs further evaluation, it also has the potential under the condition of dense canopies. It provides the effective improvement to the NDVI and other vegetation indices that are based on the red and NIR spectral bands.


Author(s):  
Lijuan Wang ◽  
Guimin Zhang ◽  
Hui Lin ◽  
Liang Liang ◽  
Zheng Niu

The Normalized Difference Vegetation Index (NDVI) is widely used for Leaf Area Index (LAI) estimation. It is well documented that the NDVI is extremely subject to the saturation problem when LAI reaches a high value. A new multi-angular vegetation index, the Hotspot-darkspot Difference Vegetation Index (HDVI) is proposed to estimate the high density LAI. The HDVI, defined as the difference between the hot and dark spot NDVI, relative to the dark spot NDVI, was proposed based on the Analytical two-layer Canopy Reflectance Model (ACRM) model outputs. This index is validated using both in situ experimental data in wheat and data from the multi-angular optical Compact High-Resolution Imaging Spectrometer (CHRIS) satellite. Both indices, the Hotspot-Darkspot Index (HDS) and the NDVI were also selected to analyze the relationship with LAI, and were compared with new index HDVI. The results show that HDVI is an appropriate proxy of LAI with higher determination coefficients (R2) for both the data from the in situ experiment (R2=0.7342, RMSE=0.0205) and the CHRIS data (R2=0.7749, RMSE=0.1013). Our results demonstrate that HDVI can make better the occurrence of saturation limits with the information of multi-angular observation, and is more appropriate for estimating LAI than either HDS or NDVI at high LAI values. Although the new index needs further evaluation, it also has the potential under the condition of dense canopies. It provides the effective improvement to the NDVI and other vegetation indices that are based on the red and NIR spectral bands.


2007 ◽  
Vol 87 (4) ◽  
pp. 803-813 ◽  
Author(s):  
Yuhong He ◽  
Xulin Guo ◽  
John F Wilmshurst

Available LAI instruments have greatly increased our ability to estimate leaf area index (LAI) non-destructively. However, it is difficult to infer from existing studies which instrument has the advantages in measuring LAI over other instruments for grassland ecosystems. The objective of our study was to compare the LAI estimates by two instruments (AccuPAR, and LAI2000), and correlate the LAI measurements to remote sensing data for a mixed grassland. Leaf area index of four grass communities was measured by both the destructive method and instruments. Ground canopy reflectance was measured and further calculated to be LAI-related vegetation indices. Statistical analysis showed that destructively sampled LAI ranged from 0.61 to 5.7 in the study area. Both instruments underestimated LAI in comparison with the destructive method. However, the LAI2000 is better than AccuPAR for estimating LAI. Comparison of four grass communities indicated that the lower the grass LAI, the greater the underestimated percentage of LAI values collected by both instruments. The adjusted transformed soil-adjusted vegetation index (ATSAVI), was the best LAI estimator in the mixed grassland. Key words: Leaf area index, sward structure, nondestructive vegetation sampling, hyperspectral remote sensing, mixed grass prairie


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