scholarly journals Individual Tree Crown Segmentation of a Larch Plantation Using Airborne Laser Scanning Data Based on Region Growing and Canopy Morphology Features

2020 ◽  
Vol 12 (7) ◽  
pp. 1078 ◽  
Author(s):  
Zhenyu Ma ◽  
Yong Pang ◽  
Di Wang ◽  
Xiaojun Liang ◽  
Bowei Chen ◽  
...  
Keyword(s):  
Region Growing ◽  
Point Clouds ◽  
Tree Canopy ◽  
Segmentation Method ◽  
Tree Crown ◽  
Two Stage ◽  
Individual Tree ◽  
Tree Structures ◽  
Larch Plantation

The detection of individual trees in a larch plantation could improve the management efficiency and production prediction. This study introduced a two-stage individual tree crown (ITC) segmentation method for airborne light detection and ranging (LiDAR) point clouds, focusing on larch plantation forests with different stem densities. The two-stage segmentation method consists of the region growing and morphology segmentation, which combines advantages of the region growing characteristics and the detailed morphology structures of tree crowns. The framework comprises five steps: (1) determination of the initial dominant segments using a region growing algorithm, (2) identification of segments to be redefined based on the 2D hull convex area of each segment, (3) establishment and selection of profiles based on the tree structures, (4) determination of the number of trees using the correlation coefficient of residuals between Gaussian fitting and the tree canopy shape described in each profile, and (5) k-means segmentation to obtain the point cloud of a single tree. The accuracy was evaluated in terms of correct matching, recall, precision, and F-score in eight plots with different stem densities. Results showed that the proposed method significantly increased ITC detections compared with that of using only the region growing algorithm, where the correct matching rate increased from 73.5% to 86.1%, and the recall value increased from 0.78 to 0.89.

Individual Tree Measurement in Tropical Environment using Terrestrial Laser Scanning

2015 ◽  
Vol 73 (5) ◽  
Author(s):  
Muhammad Zulkarnain Abdul Rahman ◽  
Zulkepli Majid ◽  
Md Afif Abu Bakar ◽  
Abd Wahid Rasib ◽  
Wan Hazli Wan Kadir
Keyword(s):  
Laser Scanning ◽  
Mean Squared Error ◽  
Tree Height ◽  
Point Clouds ◽  
Tree Crown ◽  
Individual Tree ◽  
Branch Diameter ◽  
Reference Tree ◽  
Crown Volume ◽  
Tree Branch

Detailed forest inventory and mensuration of individual trees have drawn attention of research society mainly to support sustainable forest management. This study aims at estimating individual tree attributes from high density point cloud obtained by terrestrial laser scanner (TLS). The point clouds were obtained over single reference tree and group of trees in forest area. The reference tree is treated as benchmark since detailed measurements of branch diameter were made on selected branches with different sizes and locations. Diameter at breast height (DBH) was measured for trees in forest. Furthermore tree height, height to crown base, crown volume and tree branch volume were also estimated for each tree. Branch diameter is estimated directly from the point clouds based on semi-automatic approach of model fitting i.e. sphere, ellipse and cylinder. Tree branch volume is estimated based on the volume of the fitted models. Tree height and height to crown base are computed using histogram analysis of the point clouds elevation. Tree crown volume is estimated by fitting a convex-hull on the tree crown. The results show that the Root Mean Squared Error (RMSE) of the estimated tree branch diameter does not have a specific trend with branch sizes and number of points used for fitting process. This explains complicated distribution of point clouds over the branches. Overall cylinder model produces good results with most branch sizes and number of point clouds for fitting. The cylinder fitting approach shows significantly better estimation results compared to sphere and ellipse fitting models.   

scholarly journals INDIVIDUAL TREE EXTRACTION FROM UAV LIDAR POINT CLOUDS BASED ON SELF-ADAPTIVE MEAN SHIFT SEGMENTATION

2021 ◽  
Vol V-1-2021 ◽  
pp. 25-30
Author(s):  
Z. Hui ◽  
N. Li ◽  
Y. Xia ◽  
P. Cheng ◽  
Y. He
Keyword(s):  
Mean Shift ◽  
Point Clouds ◽  
Extraction Methods ◽  
Parameter Setting ◽  
Segmentation Method ◽  
Individual Tree ◽  
Unman Aerial Vehicle ◽  
Aerial Vehicle ◽  
The Individual ◽  
Tree Extraction

Abstract. Unman aerial vehicle (UAV) LiDAR has been widely used in the field of forestry. Individual tree extraction is a key step for forest inventory. Although many individual tree extraction methods have been proposed, the individual tree extraction accuracy is still low due to the complex forest environments. Moreover, many parameters in these methods generally need to be set. Thus, the degree of automation of the methods is generally low. To solve these problems, this paper proposed an automatic mean shift segmentation method, in which the kernel bandwidths can be calculated self-adaptively. Meanwhile, a hierarchy mean shift segmentation technique was proposed to extract individual tree gradually. A plot-level UAV LiDAR tree dataset was adopted for testing the performance of the proposed method. Experimental results showed that the proposed method can achieve better individual tree extraction result without any parameter setting. Compared with the traditional mean shift segmentation method, both the completeness and mean accuracy of the proposed method are higher.

scholarly journals Automatic Delineation and Height Measurement of Regenerating Conifer Crowns under Leaf-Off Conditions Using UAV Imagery

2020 ◽  
Vol 12 (24) ◽  
pp. 4104
Author(s):  
Andrew J. Chadwick ◽  
Tristan R. H. Goodbody ◽  
Nicholas C. Coops ◽  
Anne Hervieux ◽  
Christopher W. Bater ◽  
...  
Keyword(s):  
Spatial Resolution ◽  
Picea Glauca ◽  
Pinus Contorta ◽  
Tree Height ◽  
Point Clouds ◽  
Strongly Correlated ◽  
Tree Crown ◽  
Height Measurement ◽  
Individual Tree ◽  
Fine Spatial Resolution

The increasing use of unmanned aerial vehicles (UAV) and high spatial resolution imagery from associated sensors necessitates the continued advancement of efficient means of image processing to ensure these tools are utilized effectively. This is exemplified in the field of forest management, where the extraction of individual tree crown information stands to benefit operational budgets. We explored training a region-based convolutional neural network (Mask R-CNN) to automatically delineate individual tree crown (ITC) polygons in regenerating forests (14 years after harvest) using true colour red-green-blue (RGB) imagery with an average ground sampling distance (GSD) of 3 cm. We predicted ITC polygons to extract height information using canopy height models generated from digital aerial photogrammetric (DAP) point clouds. Our approach yielded an average precision of 0.98, an average recall of 0.85, and an average F1 score of 0.91 for the delineation of ITC. Remote height measurements were strongly correlated with field height measurements (r2 = 0.93, RMSE = 0.34 m). The mean difference between DAP-derived and field-collected height measurements was −0.37 m and −0.24 m for white spruce (Picea glauca) and lodgepole pine (Pinus contorta), respectively. Our results show that accurate ITC delineation in young, regenerating stands is possible with fine-spatial resolution RGB imagery and that predicted ITC can be used in combination with DAP to estimate tree height.

scholarly journals Characterizing Seedling Stands Using Leaf-Off and Leaf-On Photogrammetric Point Clouds and Hyperspectral Imagery Acquired from Unmanned Aerial Vehicle

Forests ◽  
2019 ◽  
Vol 10 (5) ◽  
pp. 415 ◽  
Author(s):  
Mohammad Imangholiloo ◽  
Ninni Saarinen ◽  
Lauri Markelin ◽  
Tomi Rosnell ◽  
Roope Näsi ◽  
...  
Keyword(s):  
Laser Scanning ◽  
Hyperspectral Imagery ◽  
Digital Terrain Model ◽  
Tree Height ◽  
Point Clouds ◽  
Tree Density ◽  
Tree Canopy ◽  
Tree Level ◽  
Species Classification ◽  
Individual Tree

Seedling stands are mainly inventoried through field measurements, which are typically laborious, expensive and time-consuming due to high tree density and small tree size. In addition, operationally used sparse density airborne laser scanning (ALS) and aerial imagery data are not sufficiently accurate for inventorying seedling stands. The use of unmanned aerial vehicles (UAVs) for forestry applications is currently in high attention and in the midst of quick development and this technology could be used to make seedling stand management more efficient. This study was designed to investigate the use of UAV-based photogrammetric point clouds and hyperspectral imagery for characterizing seedling stands in leaf-off and leaf-on conditions. The focus was in retrieving tree density and the height in young seedling stands in the southern boreal forests of Finland. After creating the canopy height model from photogrammetric point clouds using national digital terrain model based on ALS, the watershed segmentation method was applied to delineate the tree canopy boundary at individual tree level. The segments were then used to extract tree heights and spectral information. Optimal bands for calculating vegetation indices were analysed and used for species classification using the random forest method. Tree density and the mean tree height of the total and spruce trees were then estimated at the plot level. The overall tree density was underestimated by 17.5% and 20.2% in leaf-off and leaf-on conditions with the relative root mean square error (relative RMSE) of 33.5% and 26.8%, respectively. Mean tree height was underestimated by 20.8% and 7.4% (relative RMSE of 23.0% and 11.5%, and RMSE of 0.57 m and 0.29 m) in leaf-off and leaf-on conditions, respectively. The leaf-on data outperformed the leaf-off data in the estimations. The results showed that UAV imagery hold potential for reliably characterizing seedling stands and to be used to supplement or replace the laborious field inventory methods.

scholarly journals Development of a Low-Cost System for 3D Orchard Mapping Integrating UGV and LiDAR

Plants ◽  
2021 ◽  
Vol 10 (12) ◽  
pp. 2804
Author(s):  
Harold F. Murcia ◽  
Sebastian Tilaguy ◽  
Sofiane Ouazaa
Keyword(s):  
Reference Values ◽  
Point Cloud ◽  
Laser Scanning ◽  
Low Cost ◽  
Point Clouds ◽  
Individual Plant ◽  
Individual Tree ◽  
3D Point Clouds ◽  
Mapping System

Growing evaluation in the early stages of crop development can be critical to eventual yield. Point clouds have been used for this purpose in tasks such as detection, characterization, phenotyping, and prediction on different crops with terrestrial mapping platforms based on laser scanning. 3D model generation requires the use of specialized measurement equipment, which limits access to this technology because of their complex and high cost, both hardware elements and data processing software. An unmanned 3D reconstruction mapping system of orchards or small crops has been developed to support the determination of morphological indices, allowing the individual calculation of the height and radius of the canopy of the trees to monitor plant growth. This paper presents the details on each development stage of a low-cost mapping system which integrates an Unmanned Ground Vehicle UGV and a 2D LiDAR to generate 3D point clouds. The sensing system for the data collection was developed from the design in mechanical, electronic, control, and software layers. The validation test was carried out on a citrus crop section by a comparison of distance and canopy height values obtained from our generated point cloud concerning the reference values obtained with a photogrammetry method. A 3D crop map was generated to provide a graphical view of the density of tree canopies in different sections which led to the determination of individual plant characteristics using a Python-assisted tool. Field evaluation results showed plant individual tree height and crown diameter with a root mean square error of around 30.8 and 45.7 cm between point cloud data and reference values.

Sign in / Sign up

Export Citation Format

Share Document