scholarly journals Variability and Geographical Origin of Five Years Airborne Fungal Spore Concentrations Measured at Saclay, France from 2014 to 2018

2019 ◽  
Vol 11 (14) ◽  
pp. 1671 ◽  
Author(s):  
Roland Sarda-Estève ◽  
Dominique Baisnée ◽  
Benjamin Guinot ◽  
John Sodeau ◽  
David O’Connor ◽  
...  
Keyword(s):  
Geographical Origin ◽  
Fungal Spores ◽  
Fungal Spore ◽  
Agricultural Practice ◽  
Receptor Model ◽  
Atmospheric Variability ◽  
Atmospheric Concentration ◽  
Spore Trap ◽  
Temperature And Precipitation ◽  
Atmospheric Concentrations

Airborne fungal spores (AFS) represent the major fraction of primary biological aerosol particles (PBAPs), and they are studied worldwide largely due to their important role within the Earth system. They have an impact on climate and human health, and they contribute to the propagation of diseases. As their presence in the air depends largely on studied ecosystems, a spore trap was used to monitor their atmospheric concentrations from 2014 to December 2018 in Saclay, a suburban area in the megacity of Paris. The main objective of this work was: (1) to understand the atmospheric variability of AFS in relation to different variables such as meteorological factors, agricultural practice, and (2) to identify their geographical origin by using a source receptor model. During our period of observation, 30 taxa have been identified under a light microscope. In order of importance, Ascospores, Cladosporium, Basidiospores, Tilletiopsis, Alternaria were found to be the most abundant types respectively (50.8%, 33.6%, 7.6%, 1.8%, and 1.3%) accounting for 95% of the atmospheric concentrations. We observed a general decrease associated with a strong interannual variability. A bimodal seasonal cycle was identified with a first maximum in July and a second in October. The main parameters driving the atmospheric concentration are temperature and precipitation. The daily variability is strongly activated by successive periods of hot weather and rainfall, multiplying the concentration by a factor of 1000 in less than 12 hours. Results from the source receptor model ZeFir point out unambiguous different origins of AFS due to specific sources impacting the observation site. Our study also indicated that a hydrological stress has a direct effect on the daily concentrations. This last point should be taken into account for every stressed ecosystem studied in a global warming context. This is particularly important for Mediterranean areas where water is a key control of the growth and dispersion of fungal spores.

scholarly journals New methods for detecting and enumerating fungal spores of plant  pathogens

2002 ◽  
Vol 38 (SI 1 - 6th Conf EFPP 2002) ◽  
pp. S38-S42
Author(s):  
R. Kennedy ◽  
A.J. Wakeham
Keyword(s):  
Plant Pathogens ◽  
Fungal Spores ◽  
Fungal Spore ◽  
Airborne Spores ◽  
Suction System ◽  
Spore Trap ◽  
New Methods ◽  
Fungal Plant Pathogens ◽  
Specialist Knowledge ◽  
User Friendly

Information on the presence or absence of airborne spores or other particles would be useful in an increasing number of areas including agriculture. Traditional methods used for detecting and enumerating of airborne spores of fungal plant pathogens are time consuming and require specialist knowledge. Some spore types (e.g. ascospores) are difficult to differentiate using these methods. To facilitate this, new methods, which can be used to accurately differentiate fungal spore types, are required. A Burkard 7-day volumetric spore trap used in combination with an immunofluorescence test has been developed to detect and quantify field-trapped ascosporic inoculum of Mycosphaerella brassicicola (the ringspot pathogen of brassicas). This test has also been found useful in the validation of more rapid user-friendly immunoassay based trapping procedures. A microtiter immunospore trapping device, which uses a suction system to directly trap air-particulates by impaction into microtiter wells, has been used successfully for the rapid detection and quantification of ascosporic inoculum of M. brassicicola. The system shows potential for the rapid field-detection of airborne ascosporic inoculum of the ringspot pathogen.

scholarly journals Diversity, Concentration and Dynamics of Culturable Fungal Bioaerosols at Doha, Qatar

2020 ◽  
Vol 18 (1) ◽  
pp. 182
Author(s):  
Raghdaa K. Fayad ◽  
Roda F. Al-Thani ◽  
Fatima A. Al-Naemi ◽  
Mohammed H. Abu-Dieyeh
Keyword(s):  
Species Richness ◽  
Fungal Spores ◽  
Gravimetric Method ◽  
Fungal Spore ◽  
Industrial Area ◽  
Airborne Fungi ◽  
Culture Collection ◽  
Colony Count ◽  
Study Sites ◽  
Future Work

This research was conducted to investigate the dynamics of airborne fungi using viable culture collection and in respect to different abiotic variables, including seasonal and intra-diurnal variations. A gravimetric method was used to sample airborne fungal deposition on potato dextrose agar plates on alternate days, for a year between April 2015 to March 2016. From 176 settle plate exposures, a total of 1197 mould and 283 yeast colony-forming units (CFU), 21 genera and 62 species were retrieved. The highest fungal spore count was recorded in February 2016, whereas the lowest count occurred in August 2015. The main constituents of the fungal airspora were attributed to Cladosporium (60.2%), Aspergillus (10.4%), Fusarium (9.4%), Alternaria (8.5%), and Ganoderma spp. (2.3%). Temperature was negatively correlated with total colony count (r = −0.231, p ≤ 0.05) or species richness (r = −0.267, p ≤ 0.001), while wind speed was positively correlated with total colony count (r = 0.484, p ≤ 0.001) or species richness (r = 0.257, p ≤ −0.001). The highest dispersal of fungal spores was obtained at 18:00, whereas the lowest fungal spores release was recorded at 00:00 (midnight). There were no significant differences in species composition and richness of the airborne fungal population between two study sites, the Industrial area and Qatar University Campus. The count of Alternaria spp. and Fusarium spp. were significantly higher at the Industrial area site, which corresponds to a higher CO2 level than the Qatar University site. This study lays the foundation for future work to assess the implications of such aeromycological data on public health.

scholarly journals Characterisation of biofluorescent aerosol emissions over winter and summer periods in the United Kingdom

2018 ◽  
Author(s):  
Elizabeth Forde ◽  
Martin Gallagher ◽  
Virginia Foot ◽  
Roland Sarda-Esteve ◽  
Ian Crawford ◽  
...  
Keyword(s):  
United Kingdom ◽  
Relative Humidity ◽  
Aerosol Particles ◽  
Fungal Spores ◽  
Ultra Violet ◽  
Fungal Spore ◽  
Complete Analysis ◽  
Hierarchical Agglomerative Cluster ◽  
The United Kingdom ◽  
Fluorescent Particles

Abstract. Primary biological aerosol particles (PBAP) are an abundant subset of atmospheric aerosol particles which comprise viruses, bacteria, fungal spores, pollen, and fragments such as plant and animal debris. The abundance and diversity of these particles remain poorly constrained, causing significant uncertainties for modelling scenarios and for understanding the potential implications of these particles in different environments. PBAP concentrations were studied at four different sites in the United Kingdom (Weybourne, Davidstow, Capel Dewi, and Chilbolton) using an ultra-violet light induced fluorescence (UV-LIF) instrument, the Wideband Integrated Bioaerosol Spectrometer (WIBS), versions 3 and 4. Using hierarchical agglomerative cluster (HAC) analysis, particles were statistically discriminated between. Fluorescent particles and clusters were then analysed by assessing their diurnal variation and their relationship to the meteorological variables, temperature and relative humidity, and wind speed and direction. Using local land cover types, sources of the suspected fluorescent particles and clusters were then identified. Most sites exhibited a wet discharged fungal spore dominance, with the exception of one site, Davidstow, which had higher concentrations of bacteria, suggested to result from the presence of a local dairy factory. Differences were identified as to the sources of wet discharged fungal spores, with particles originating from arable and horticultural land at Chilbolton, and improved grassland areas at Weybourne. Total fluorescent particles at Capel Dewi were inferred to comprise two sources, with bacteria originating from the broadleaf and coniferous woodland and wet discharged fungal spores from nearby improved grassland areas, similar to Weybourne. The use of HAC and a higher fluorescence threshold (9SD) produced clusters which were considered to be biological following the complete analysis. More knowledge of the reaction of speciated biological particles to differences in meteorology, such as relative humidity and temperature would aid characterisation studies such as this.

scholarly journals Study of the main processes driving atmospheric CH<sub>4</sub> variability in a rural Spanish region

2017 ◽  
Author(s):  
Claudia Grossi ◽  
Felix R. Vogel ◽  
Roger Curcoll ◽  
Alba Àgueda ◽  
Arturo Vargas ◽  
...  
Keyword(s):  
Transport Model ◽  
Atmospheric Transport ◽  
Daily Basis ◽  
Atmospheric Variability ◽  
Absolute Deviation ◽  
Monthly Basis ◽  
Bottom Up ◽  
Methane Fluxes ◽  
Carbon Dioxide Co2 ◽  
Atmospheric Concentrations

Abstract. Atmospheric concentrations of the two main greenhouse gases (GHGs), carbon dioxide (CO2) and methane (CH4), are continuously measured since November 2012 at the Spanish rural station of Gredos (GIC3), within the climate network ClimaDat, together with atmospheric radon (222Rn) tracer and meteorological parameters. The atmospheric variability of CH4 concentrations measured from 2013 to 2015 at GIC3 has been analyzed in this study. It is interpreted in relation to the variability of measured 222Rn concentrations, modelled 222Rn fluxes and modelled heights of the planetary boundary layer (PBLH) in the same period. In addition, nocturnal fluxes of CH4 were estimated using two methods: the Radon Tracer Method (RTM) and one based on the EDGARv4.2 bottom-up emission inventory. Both previous methods have been applied using the same footprints, calculated with the atmospheric transport model FLEXPARTv6.2. Results show that daily and seasonal changes in atmospheric concentrations of 222Rn (and the corresponding fluxes) can help to understand the atmospheric CH4 variability. On daily basis, the variation in the PBLH mainly drives changes in 222Rn and CH4 concentrations while, on monthly basis, their atmospheric variability seems to depend on changes in their emissions. The median value of RTM based methane fluxes (FR_CH4) is 0.17 mg CH4 m−2 h−1 with an absolute deviation of 0.08 mg CH4 m−2 h−1. Median methane fluxes based on bottom-up inventory (FE_CH4) is of 0.32 mg CH4 m−2 h−1 with an absolute deviation of 0.06 mg CH4 m−2 h−1. Monthly FR_CH4 flux shows a seasonality which is not observed in the monthly FE_CH4 flux. During January–May FR_CH4 fluxes present a median value of 0.08 mg CH4 m−2 h−1 with an absolute deviation of 0.05 mg CH4 m−2 h−1 and a median value of 0.19 mg CH4 m−2 h−1 with an absolute deviation of 0.06 mg CH4 m−2 h−1 during June–December. This seasonal doubling of the median methane fluxes calculated by RTM at the GIC3 area seems to be mainly related to the alternate presence of transhumant livestock in the GIC3 area. The results obtained in this study highlight the benefit of applying independent RTM to improve the seasonality of the emission factors from bottom-up inventories.

New genera of Paleogene fungal spores

1974 ◽  
Vol 52 (5) ◽  
pp. 953-958 ◽  
Author(s):  
William C. Elsik ◽  
Jan Jansonius
Keyword(s):  
Fungal Spores ◽  
Arctic Region ◽  
Fungal Spore ◽  
Western Hemisphere ◽  
Northwest Pacific ◽  
New Genera ◽  
New Form

Ctenosporites, Granatisporites, and Pesavis are described as new form genera of fossil fungal spores and spore-like fossils; Striadiporites and Pluricellaesporites are emended. Pesavis and Ctenosporites are geographically restricted to the northwest Pacific and Arctic region. Granatisporites is described to facilitate the classification of fungal spore types ubiquitous over at least the Western Hemisphere.

Well-preserved fungal spores from Jurassic rocks of Hells Canyon on the Idaho–Oregon border

1994 ◽  
Vol 68 (3) ◽  
pp. 664-668 ◽  
Author(s):  
Alfred Traverse ◽  
Sidney R. Ash
Keyword(s):  
New Species ◽  
Fungal Spores ◽  
Fungal Spore ◽  
Spores And Pollen ◽  
Marine Animals ◽  
Spore Form ◽  
Two New Species ◽  
Jurassic Rocks ◽  
One New Species ◽  
Hells Canyon

Palynoflorules containing sparse but regularly occurring chitinous-walled fungal, probably ascomycete, spores have been obtained from silty limestone nodules in the Jurassic Coon Hollow Formation in the Wallowa terrane in Hells Canyon, Idaho. The fungal spores are associated with moderately abundant embryophytic spores and pollen that suggest late Early Jurassic to early Middle Jurassic age, which agrees with dating provided by marine animals stratigraphically just above. The fungal spores constitute the most diverse such assemblage of robust-walled spores described from pre-Cretaceous rocks. Two new species of the fossil fungal spore form-genus Diporicellaesporites, D. idahoensis and D. serratulus, and one new species of form-genus Fractisporonites, F. pittsburgensis, are described.

scholarly journals Rain-induced bioecological resuspension of radiocaesium in a polluted forest in Japan

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Kazuyuki Kita ◽  
Yasuhito Igarashi ◽  
Takeshi Kinase ◽  
Naho Hayashi ◽  
Masahide Ishizuka ◽  
...  
Keyword(s):  
Forest Ecology ◽  
Fungal Spores ◽  
Fungal Spore ◽  
Radioactive Aerosol ◽  
Exclusion Zone ◽  
Forest Environment ◽  
Major Mechanism ◽  
Research Fields ◽  
Rainy Weather ◽  
Japanese Forest

Abstract It is the conventional understanding that rain removes aerosols from the atmosphere. However, the question of whether rain plays a role in releasing aerosols to the atmosphere has recently been posed by several researchers. In the present study, we show additional evidence for rain-induced aerosol emissions in a forest environment: the occurrence of radiocaesium-bearing aerosols in a Japanese forest due to rain. We carried out general radioactive aerosol observations in a typical mountainous village area within the exclusion zone in Fukushima Prefecture to determine the impacts and major drivers of the resuspension of radiocaesium originating from the nuclear accident in March 2011. We also conducted sampling according to the weather (with and without rain conditions) in a forest to clarify the sources of atmospheric radiocaesium in the polluted forest. We found that rain induces an increase in radiocaesium in the air in forests. With further investigations, we confirmed that the fungal spore sources of resuspended radiocaesium seemed to differ between rainy weather and nonrainy weather. Larger fungal particles (possibly macroconidia) are emitted during rainy conditions than during nonrainy weather, suggesting that splash generation by rain droplets is the major mechanism of the suspension of radiocaesium-bearing mould-like fungi. The present findings indicate that radiocaesium could be used as a tracer in such research fields as forest ecology, meteorology, climatology, public health and agriculture, in which fungal spores have significance.

scholarly journals Relating dung fungal spore influx rates to animal density in a temperate environment: Implications for palaeoecological studies

The Holocene ◽  
2019 ◽  
Vol 30 (2) ◽  
pp. 218-232 ◽  
Author(s):  
Eline N van Asperen ◽  
Jason R Kirby ◽  
Helen E Shaw
Keyword(s):  
Deciduous Forest ◽  
Vegetation Type ◽  
Fungal Spores ◽  
Background Level ◽  
Fungal Spore ◽  
Weather Conditions ◽  
Grazing Pressure ◽  
Large Herbivores ◽  
Fungal Abundance ◽  
The Impact

The management of the remainder of Europe’s once extensive forests is hampered by a poor understanding of the character of the vegetation and drivers of change before the onset of clearance for farming. Pollen data indicate a closed-canopy, mixed-deciduous forest, contrasting with the assertion that large herbivores would have maintained a mosaic of open grassland, regenerating scrub and forested groves. Coprophilous fungal spores from sedimentary sequences are increasingly used as a proxy for past herbivore impact on vegetation, but the method faces methodological and taphonomical issues. Using pollen trap data from a long-running experiment in Chillingham Wild Cattle Park, UK, we investigate the first steps in the mechanisms connecting herbivore density to the incorporation of fungal spores in sediments and assess the effects of environmental variables on this relationship. Herbivore utilisation levels correlate with dung fungal spore abundance. Chillingham is densely populated by large herbivores, but dung fungal spore influx is low. Herbivores may thus be present on the landscape but go undetected. The absence of dung fungal spores is therefore less informative than their presence. Dung fungal spores likely enter the sediment record through a different pathway from wind-borne pollen and thus dung fungal abundance is better expressed as influx rates than as percentage of total pollen. Landscape openness, vegetation type and site wetness do not distort the impact of utilisation levels on dung fungal spore representation. However, dung fungal spore influx varies markedly between seasons and years. Spores travel, leading to a background level of spore deposition across the landscape, and at times a depletion of spores, especially under wet weather conditions. Animal behaviour, as well as husbandry practices, can lead to the accumulation of dung, and thus fungal spores, in specific locations on the landscape that do not directly reflect grazing pressure.

scholarly journals Leveraging a high resolution microfluidic assay reveals insights into pathogenic fungal spore germination

2016 ◽  
Vol 8 (5) ◽  
pp. 603-615 ◽  
Author(s):  
Layla J. Barkal ◽  
Naomi M. Walsh ◽  
Michael R. Botts ◽  
David J. Beebe ◽  
Christina M. Hull
Keyword(s):  
High Resolution ◽  
Spore Germination ◽  
Fungal Spores ◽  
Fungal Spore

Germination of a population of pathogenic fungal spores into yeast can be tracked, quantified, and parsed using a microfluidic assay.

scholarly journals Regional-scale simulations of fungal spore aerosols using an emission parameterization adapted to local measurements of fluorescent biological aerosol particles

2015 ◽  
Vol 15 (11) ◽  
pp. 6127-6146 ◽  
Author(s):  
M. Hummel ◽  
C. Hoose ◽  
M. Gallagher ◽  
D. A. Healy ◽  
J. A. Huffman ◽  
...  
Keyword(s):  
Aerosol Particles ◽  
Regional Scale ◽  
Fungal Spores ◽  
Fungal Spore ◽  
Specific Humidity ◽  
Small Scale ◽  
Area Index ◽  
Reactive Trace Gases ◽  
Mean Square Errors ◽  
Biological Aerosol Particles

Abstract. Fungal spores as a prominent type of primary biological aerosol particles (PBAP) have been incorporated into the COSMO-ART (Consortium for Small-scale Modelling-Aerosols and Reactive Trace gases) regional atmospheric model. Two literature-based emission rates for fungal spores derived from fungal spore colony counts and chemical tracer measurements were used as a parameterization baseline for this study. A third, new emission parameterization for fluorescent biological aerosol particles (FBAP) was adapted to field measurements from four locations across Europe. FBAP concentrations can be regarded as a lower estimate of total PBAP concentrations. Size distributions of FBAP often show a distinct mode at approx. 3 μm, corresponding to a diameter range characteristic for many fungal spores. Previous studies for several locations have suggested that FBAP are in many cases dominated by fungal spores. Thus, we suggest that simulated FBAP and fungal spore concentrations obtained from the three different emission parameterizations can be compared to FBAP measurements. The comparison reveals that simulated fungal spore concentrations based on literature emission parameterizations are lower than measured FBAP concentrations. In agreement with the measurements, the model results show a diurnal cycle in simulated fungal spore concentrations, which may develop partially as a consequence of a varying boundary layer height between day and night. Temperature and specific humidity, together with leaf area index (LAI), were chosen to drive the new emission parameterization which is fitted to the FBAP observations. The new parameterization results in similar root mean square errors (RMSEs) and correlation coefficients compared to the FBAP observations as the previously existing fungal spore emission parameterizations, with some improvements in the bias. Using the new emission parameterization on a model domain covering western Europe, FBAP in the lowest model layer comprise a fraction of 15% of the total aerosol mass over land and reach average number concentrations of 26 L−1. The results confirm that fungal spores and biological particles may account for a major fraction of supermicron aerosol particle number and mass concentration over vegetated continental regions and should thus be explicitly considered in air quality and climate studies.

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