scholarly journals Inferring Active Noise Characteristics from the Paired Observations of Anomalous Diffusion

Polymers ◽  
2018 ◽  
Vol 11 (1) ◽  
pp. 2 ◽  
Author(s):  
Takuya Saito ◽  
Takahiro Sakaue
Keyword(s):  
Momentum Transfer ◽  
Anomalous Diffusion ◽  
Mean Square Displacement ◽  
The Other ◽  
Mean Square ◽  
Equilibrium Relation ◽  
Time Integral ◽  
Noise Characteristics ◽  
Active Noise ◽  
The Mean

Anomalous diffusion has been most often argued in terms of a position fluctuation of a tracer. We here propose the other fluctuating observable, i.e., momentum transfer defined as the time integral of applied force to hold a tracer’s position. Being a conjugated variable, the momentum transfer is thought of as generating the anomalous diffusion paired with the position’s one. By putting together the paired anomalous diffusions, we aim to extract useful information in complex systems, which can be applied to experiments like tagged monomer observations in chromatin. The polymer being in the equilibrium, the mean square displacement (or variance) of position displacement or momentum transfer exhibits the sub- or superdiffusion, respectively, in which the sum of the anomalous diffusion indices is conserved quite generally, but the nonequilibrium media that generate the active noise may manifest the derivations from the equilibrium relation. We discuss the deviations that reflect the characteristics of the active noise.

scholarly journals Lecture on the anomalous diffusion in Condensed Matter Physics

2018 ◽  
Vol 3 (2) ◽  
Author(s):  
M. Benhamou ◽  
Keyword(s):  
Anomalous Diffusion ◽  
Condensed Matter ◽  
Mean Square Displacement ◽  
Continuous Phase ◽  
Generalized Langevin Equation ◽  
Velocity Autocorrelation Function ◽  
Condensed Matter Physics ◽  
Mean Square ◽  
Pickering Emulsions ◽  
The Mean

Diffusion is a natural or artificial process that governs many phenomena in nature. The most known diffusion is the Brownian or normal motion, where the mean-square-displacement of the tracer (diffusive particle among others) increases as the square-root of time. It is not the case, however, for complex systems, where the diffusion is rather slow, because at small-scales, these media present an heterogenous structure. This kind of slow motion is called subdiffusion, where the associated mean-square-displacement increases in time, with a non trivial exponent, alpha, whose value is between 0 and 1. In this review paper, we report on new trends dealing with the study of the anomalous diffusion in Condensed Matter Physics. The study is achieved using a theoretical approach that is based on a Generalized Langevin Equation. As particular crowded systems, we choose the so-called Pickering emulsions (oil-in-water), and we are interested in how the dispersed droplets (protected by small solid charged nanoparticles) can diffuse in the continuous phase (water). Dynamic study is accomplished through the mean-square-displacement and the velocity-autocorrelation-function. Finally, a comparison with Molecular Dynamics data is made.

scholarly journals Reconstruction of Diffusion Coefficients and Power Exponents from Single Lagrangian Trajectories

Fluids ◽  
2021 ◽  
Vol 6 (3) ◽  
pp. 111
Author(s):  
Leonid M. Ivanov ◽  
Collins A. Collins ◽  
Tetyana Margolina
Keyword(s):  
Black Sea ◽  
Diffusion Coefficients ◽  
Current System ◽  
Mean Square Displacement ◽  
California Current ◽  
The Black Sea ◽  
Mean Square ◽  
California Current System ◽  
The Mean ◽  
Non Gaussian

Using discrete wavelets, a novel technique is developed to estimate turbulent diffusion coefficients and power exponents from single Lagrangian particle trajectories. The technique differs from the classical approach (Davis (1991)’s technique) because averaging over a statistical ensemble of the mean square displacement (<X2>) is replaced by averaging along a single Lagrangian trajectory X(t) = {X(t), Y(t)}. Metzler et al. (2014) have demonstrated that for an ergodic (for example, normal diffusion) flow, the mean square displacement is <X2> = limT→∞τX2(T,s), where τX2 (T, s) = 1/(T − s) ∫0T−s(X(t+Δt) − X(t))2 dt, T and s are observational and lag times but for weak non-ergodic (such as super-diffusion and sub-diffusion) flows <X2> = limT→∞≪τX2(T,s)≫, where ≪…≫ is some additional averaging. Numerical calculations for surface drifters in the Black Sea and isobaric RAFOS floats deployed at mid depths in the California Current system demonstrated that the reconstructed diffusion coefficients were smaller than those calculated by Davis (1991)’s technique. This difference is caused by the choice of the Lagrangian mean. The technique proposed here is applied to the analysis of Lagrangian motions in the Black Sea (horizontal diffusion coefficients varied from 105 to 106 cm2/s) and for the sub-diffusion of two RAFOS floats in the California Current system where power exponents varied from 0.65 to 0.72. RAFOS float motions were found to be strongly non-ergodic and non-Gaussian.

Molecular Dynamics Study of Microscopic Mechanism of Diffusion in Li2SiO3 System

1991 ◽  
Vol 46 (7) ◽  
pp. 616-620 ◽  
Author(s):  
Junko Habasaki
Keyword(s):  
Molecular Dynamics ◽  
Coordination Number ◽  
Md Simulation ◽  
Mean Square Displacement ◽  
Mean Square ◽  
Lithium Ions ◽  
Microscopic Mechanism ◽  
Trapping Model ◽  
The Mean

MD simulation has been performed to learn the microscopic mechanism of diffusion of ions in the Li2SiO3 system. The motion of lithium ions can be explained by the trapping model, where lithium is trapped in the polyhedron and moves with fluctuation of the coordination number. The mean square displacement of lithium was found to correlate well with the net changes in coordination number.

Effect on Polymer Chain Structure Caused by the Molar Fraction of 4-Hydroxybutyrate in Poly(3-hydroxybutyrate- co -4-hydroxybutyrate)

2012 ◽  
Vol 602-604 ◽  
pp. 776-780
Author(s):  
Zhi Qiang Li ◽  
Mei Li ◽  
Wei Jia Fan
Keyword(s):  
Molecular Weight ◽  
Intrinsic Viscosity ◽  
Polymer Chain ◽  
Molar Fraction ◽  
Chain Structure ◽  
The Other ◽  
Mean Square ◽  
Polarizing Microscope ◽  
Other Hand ◽  
The Mean

Poly(3-hydroxybutyrate-co-4-hydroxybutyrate)copolymer [P(3HB-co-4HB)] is a kind of biodegradable high molecular polymer produced by bioaccumulation. Because of the good biodegradability and biocompatibility, P(3HB-co-4HB)s have attracted wide attention . At first, the intrinsic viscosity[η] in good solvent of P(3HB-co-4HB) s with varying contents of 4HB was investigated in different temperature. Second, observed the changes of crystallization gathered state caused by the varying contents of 4HB by polarizing microscope. The results show that to the P(3HB-co-4HB)s in same molecular weight, the intrinsic viscosity[η] in good solvent barely changes when the mole fractions of 4HB increase. On the other hand, the mean square end to end distances[0] of macromolecular flexible chains increase with the mole fractions of 4HB. At the same time, the states of aggregation change from spherulites to dendrites. In this investigation, we discuss the reasons of the differences in depth.

THE EFFECT OF PREMELTING: STUDY FOR SEMI-INFINITE CRYSTALS AND NANO-SYSTEMS

1994 ◽  
Vol 08 (24) ◽  
pp. 3411-3422 ◽  
Author(s):  
W. SCHOMMERS
Keyword(s):  
Pair Correlation ◽  
Mean Square Displacement ◽  
Phonon Density ◽  
Mean Square ◽  
Phonon Density Of States ◽  
Molecular Dynamics Calculations ◽  
Theory Of Melting ◽  
The Mean ◽  
Dynamical Properties ◽  
Reliable Interaction

The effect of premelting is of particular interest in connection with the theory of melting. In this paper, we discuss the structural and dynamical properties of the surfaces of semi-infinite crystals as well as of nano-clusters, which show the effect of premelting. The investigations are based on molecular-dynamics calculations: different models are used for the systematic study of the effect of premelting. In particular, the behaviour of the following functions have been studied: pair correlation function, generalized phonon density of states, and the mean-square displacement as a function of time. The calculations have been done for krypton since for this substance a reliable interaction potential is available.

Non-Markovian effect of the fractional damping environment and Newton’s second law of motion

2018 ◽  
Vol 32 (19) ◽  
pp. 1850210
Author(s):  
Chun-Yang Wang ◽  
Zhao-Peng Sun ◽  
Ming Qin ◽  
Yu-Qing Xu ◽  
Shu-Qin Lv ◽  
...  
Keyword(s):  
Diffusion Process ◽  
Mean Square Displacement ◽  
Dynamical Analysis ◽  
Second Law ◽  
Mean Square ◽  
Fractional Damping ◽  
Dynamical Mechanism ◽  
Brownian Particles ◽  
The Mean ◽  
Dissipative Environments

We report, in this paper, a recent study on the dynamical mechanism of Brownian particles diffusing in the fractional damping environment, where several important quantities such as the mean square displacement (MSD) and mean square velocity are calculated for dynamical analysis. A particular type of backward motion is found in the diffusion process. The reason of it is analyzed intrinsically by comparing with the diffusion in various dissipative environments. Results show that the diffusion in the fractional damping environment obeys the Langevin dynamics which is quite different form what is expected.

Transient Response of a Shear Beam to Correlated Random Boundary Excitation

1977 ◽  
Vol 44 (3) ◽  
pp. 487-491 ◽  
Author(s):  
S. F. Masri ◽  
F. Udwadia
Keyword(s):  
Time Delays ◽  
Spectral Characteristics ◽  
Mean Square Displacement ◽  
Dimensionless Time ◽  
Mean Square ◽  
Random Boundary ◽  
Mean Square Response ◽  
Shear Beam ◽  
The Mean ◽  
Support Motion

The transient mean-square displacement, slope, and relative motion of a viscously damped shear beam subjected to correlated random boundary excitation is presented. The effects of various system parameters including the spectral characteristics of the excitation, the delay time between the beam support motion, and the beam damping have been investigated. Marked amplifications in the mean-square response are shown to occur for certain dimensionless time delays.

scholarly journals Generalized Diffusion Equation Associated with a Power-Law Correlated Continuous Time Random Walk

2019 ◽  
Vol 2019 ◽  
pp. 1-5
Author(s):  
Long Shi
Keyword(s):  
Random Walk ◽  
Diffusion Equation ◽  
Power Law ◽  
Continuous Time ◽  
Continuum Limit ◽  
Waiting Times ◽  
Mean Square Displacement ◽  
Continuous Time Random Walk ◽  
Mean Square ◽  
The Mean

In this work, a generalization of continuous time random walk is considered, where the waiting times among the subsequent jumps are power-law correlated with kernel function M(t)=tρ(ρ>-1). In a continuum limit, the correlated continuous time random walk converges in distribution a subordinated process. The mean square displacement of the proposed process is computed, which is of the form 〈x2(t)〉∝tH=t1/(1+ρ+1/α). The anomy exponent H varies from α to α/(1+α) when -1<ρ<0 and from α/(1+α) to 0 when ρ>0. The generalized diffusion equation of the process is also derived, which has a unified form for the above two cases.

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