scholarly journals Dataset Growth in Medical Image Analysis Research

2021 ◽  
Vol 7 (8) ◽  
pp. 155
Author(s):  
Nahum Kiryati ◽  
Yuval Landau
Keyword(s):  
Image Analysis ◽  
Statistical Analysis ◽  
Medical Image ◽  
Imaging Modality ◽  
Geometric Mean ◽  
Medical Image Analysis ◽  
Annual Growth ◽  
Computer Assisted ◽  
Dataset Size ◽  
Medical Image Computing

Medical image analysis research requires medical image datasets. Nevertheless, due to various impediments, researchers have been described as “data starved”. We hypothesize that implicit evolving community standards require researchers to use ever-growing datasets. In Phase I of this research, we scanned the MICCAI (Medical Image Computing and Computer-Assisted Intervention) conference proceedings from 2011 to 2018. We identified 907 papers involving human MRI, CT or fMRI datasets and extracted their sizes. The median dataset size had grown by 3–10 times from 2011 to 2018, depending on imaging modality. Statistical analysis revealed exponential growth of the geometric mean dataset size with an annual growth of 21% for MRI, 24% for CT and 31% for fMRI. Thereupon, we had issued a forecast for dataset sizes in MICCAI 2019 well before the conference. In Phase II of this research, we examined the MICCAI 2019 proceedings and analyzed 308 relevant papers. The MICCAI 2019 statistics compare well with the forecast. The revised annual growth rates of the geometric mean dataset size are 27% for MRI, 30% for CT and 32% for fMRI. We predict the respective dataset sizes in the MICCAI 2020 conference (that we have not yet analyzed) and the future MICCAI 2021 conference.

scholarly journals Crowdsourcing human-based computation for medical image analysis: A systematic literature review

2020 ◽  
Vol 26 (4) ◽  
pp. 2446-2469
Author(s):  
Nataša Petrović ◽  
Gabriel Moyà-Alcover ◽  
Javier Varona ◽  
Antoni Jaume-i-Capó
Keyword(s):  
Image Analysis ◽  
Literature Review ◽  
Systematic Literature Review ◽  
Medical Image ◽  
Medical Image Analysis ◽  
Research Area ◽  
Computer Assisted ◽  
Control Methods ◽  
Human Interactions ◽  
Post Evaluation

Computer-assisted algorithms for the analysis of medical images require human interactions to achieve satisfying results. Human-based computation and crowdsourcing offer a solution to this problem. We performed a systematic literature review of studies on crowdsourcing human-based computation for medical image analysis based on the guidelines proposed by Kitchenham and Charters. We identified 43 studies relevant to the objective of this research. We determined three primary purposes and problems that crowdsourcing human-based computation systems can solve. We found that the users provided five information types. We compared systems that use pre-, post-evaluation and quality control methods to select and filter the user inputs. We analyzed the metrics used for the evaluation of the crowdsourcing human-based computation system performance. Finally, we identified the most popular crowdsourcing human-based computation platforms with their advantages and disadvantages.Crowdsourcing human-based computation systems can successfully solve medical image analysis problems. However, the application of crowdsourcing human-based computation systems in this research area is still limited and more studies should be conducted to obtain generalizable results. We provided guidelines to practitioners and researchers based on the results obtained in this research.

Combinatorial Double Auction Based Meta-scheduler for Medical Image Analysis Application in Grid Environment

2020 ◽  
Vol 13 (5) ◽  
pp. 999-1007
Author(s):  
Karthikeyan Periyasami ◽  
Arul Xavier Viswanathan Mariammal ◽  
Iwin Thanakumar Joseph ◽  
Velliangiri Sarveshwaran
Keyword(s):  
Image Analysis ◽  
Medical Image ◽  
Medical Image Analysis ◽  
Grid Resource ◽  
Resource Broker ◽  
Analysis Application ◽  
Local Grid ◽  
Grid Resource Broker ◽  
Global Grid ◽  
Grid Site

Background: Medical image analysis application has complex resource requirement. Scheduling Medical image analysis application is the complex task to the grid resources. It is necessary to develop a new model to improve the breast cancer screening process. Proposed novel Meta scheduler algorithm allocate the image analyse applications to the local schedulers and local scheduler submit the job to the grid node which analyses the medical image and generates the result sent back to Meta scheduler. Meta schedulers are distinct from the local scheduler. Meta scheduler and local scheduler have the aim at resource allocation and management. Objective: The main objective of the CDAM meta-scheduler is to maximize the number of jobs accepted. Methods: In the beginning, the user sends jobs with the deadline to the global grid resource broker. Resource providers sent information about the available resources connected in the network at a fixed interval of time to the global grid resource broker, the information such as valuation of the resource and number of an available free resource. CDAM requests the global grid resource broker for available resources details and user jobs. After receiving the information from the global grid resource broker, it matches the job with the resources. CDAM sends jobs to the local scheduler and local scheduler schedule the job to the local grid site. Local grid site executes the jobs and sends the result back to the CDAM. Success full completion of the job status and resource status are updated into the auction history database. CDAM collect the result from all local grid site and return to the grid users. Results: The CDAM was simulated using grid simulator. Number of jobs increases then the percentage of the jobs accepted also decrease due to the scarcity of resources. CDAM is providing 2% to 5% better result than Fair share Meta scheduling algorithm. CDAM algorithm bid density value is generated based on the user requirement and user history and ask value is generated from the resource details. Users who, having the most significant deadline are generated the highest bid value, grid resource which is having the fastest processor are generated lowest ask value. The highest bid is assigned to the lowest Ask it means that the user who is having the most significant deadline is assigned to the grid resource which is having the fastest processor. The deadline represents a time by which the user requires the result. The user can define the deadline by which the results are needed, and the CDAM will try to find the fastest resource available in order to meet the user-defined deadline. If the scheduler detects that the tasks cannot be completed before the deadline, then the scheduler abandons the current resource, tries to select the next fastest resource and tries until the completion of application meets the deadline. CDAM is providing 25% better result than grid way Meta scheduler this is because grid way Meta scheduler allocate jobs to the resource based on the first come first served policy. Conclusion: The proposed CDAM model was validated through simulation and was evaluated based on jobs accepted. The experimental results clearly show that the CDAM model maximizes the number of jobs accepted than conventional Meta scheduler. We conclude that a CDAM is highly effective meta-scheduler systems and can be used for an extraordinary situation where jobs have a combinatorial requirement.

Transfer Learning for 3‐Dimensional Medical Image Analysis

2021 ◽  
pp. 151-171
Author(s):  
Sanket Singh ◽  
Sarthak Jain ◽  
Akshit Khanna ◽  
Anupam Kumar ◽  
Ashish Sharma
Keyword(s):  
Image Analysis ◽  
Transfer Learning ◽  
Medical Image ◽  
Medical Image Analysis ◽  
3 Dimensional

APL Based medical image analysis

2000 ◽  
Vol 30 (4) ◽  
pp. 176-185
Author(s):  
Tilman P. Otto
Keyword(s):  
Image Analysis ◽  
Medical Image ◽  
Medical Image Analysis

scholarly journals TransMed: Transformers Advance Multi-Modal Medical Image Classification

Diagnostics ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1384
Author(s):  
Yin Dai ◽  
Yifan Gao ◽  
Fayu Liu
Keyword(s):  
Image Analysis ◽  
Image Classification ◽  
Long Range ◽  
Medical Image ◽  
Large Scale ◽  
Medical Images ◽  
Medical Image Analysis ◽  
Lesion Detection ◽  
Tumor Segmentation ◽  
Medical Image Classification

Over the past decade, convolutional neural networks (CNN) have shown very competitive performance in medical image analysis tasks, such as disease classification, tumor segmentation, and lesion detection. CNN has great advantages in extracting local features of images. However, due to the locality of convolution operation, it cannot deal with long-range relationships well. Recently, transformers have been applied to computer vision and achieved remarkable success in large-scale datasets. Compared with natural images, multi-modal medical images have explicit and important long-range dependencies, and effective multi-modal fusion strategies can greatly improve the performance of deep models. This prompts us to study transformer-based structures and apply them to multi-modal medical images. Existing transformer-based network architectures require large-scale datasets to achieve better performance. However, medical imaging datasets are relatively small, which makes it difficult to apply pure transformers to medical image analysis. Therefore, we propose TransMed for multi-modal medical image classification. TransMed combines the advantages of CNN and transformer to efficiently extract low-level features of images and establish long-range dependencies between modalities. We evaluated our model on two datasets, parotid gland tumors classification and knee injury classification. Combining our contributions, we achieve an improvement of 10.1% and 1.9% in average accuracy, respectively, outperforming other state-of-the-art CNN-based models. The results of the proposed method are promising and have tremendous potential to be applied to a large number of medical image analysis tasks. To our best knowledge, this is the first work to apply transformers to multi-modal medical image classification.

Deformable models in medical image analysis: a survey

1996 ◽  
Vol 1 (2) ◽  
pp. 91-108 ◽  
Author(s):  
Tim McInerney ◽  
Demetri Terzopoulos
Keyword(s):  
Image Analysis ◽  
Medical Image ◽  
Medical Image Analysis ◽  
Deformable Models
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