scholarly journals Identification and Expression Patterns of Opsin Genes in a Forest Insect, Dendrolimus punctatus

Insects ◽  
2020 ◽  
Vol 11 (2) ◽  
pp. 116
Author(s):  
Sufang Zhang ◽  
Xiangbo Kong ◽  
Fu Liu ◽  
Zhen Zhang
Keyword(s):  
Adult Stage ◽  
Vision System ◽  
Expression Patterns ◽  
Coniferous Forest ◽  
Light Response ◽  
Insect Vision ◽  
Long Wavelength ◽  
Development Stages ◽  
Opsin Genes ◽  
Survival And Reproduction

Dendrolimus punctatus walker (Lepidoptera: Lasiocampidae) is the most serious coniferous forest defoliator in China. This species has long life history, and shows different activity rhythms and light response behaviors at larval and adult stages. Insect vision system play important roles for survival and reproduction, and disturbance of photoreception may help us to control this pest. However, we know little about the visual system of D. punctatus. As opsins are the most important genes determining photoreceptor sensitivity of insects, we identified opsins of D. punctatus and analyzed their expression patterns at different development stages in this study. Four opsin genes were identified based on our transcriptome data. Phylogenetic analysis showed that there are three classical ultraviolet (UV), blue, and long-wavelength (LW) light sensitive opsin genes, and another UV-like opsin as homolog of a circadian photoreceptor, Rh7, in Drosophila melanogaster and other insects. Expression analysis indicated that the UV and UV-like opsins expression levels only fluctuated slightly during whole life stages of D. punctatus, while Blue and LW opsins were up-regulated many times at adult stage. Interestingly, the ratio of UV-opsin was much higher in eggs and larvae stages, and lower in pupa and adult stages; reversely, LW-opsin showed extremely high relative ratio in pupa and adult stages. High expression level of LW opsin in the adult stage may correlate to the nocturnal lifestyles of this species at adult stage, and different ratios of UV and LW opsins in larval and adult stages may help to explain the different visual ecologies of these two development stages of D. punctatus. This work is the foundation for further research of opsin functions and vision mechanisms of D. punctatus.

scholarly journals Exceptional diversity of opsin expression patterns in Neogonodactylus oerstedii (Stomatopoda) retinas

2020 ◽  
Vol 117 (16) ◽  
pp. 8948-8957 ◽  
Author(s):  
Megan L. Porter ◽  
Hiroko Awata ◽  
Michael J. Bok ◽  
Thomas W. Cronin
Keyword(s):  
Color Vision ◽  
Expression Patterns ◽  
Photoreceptor Cells ◽  
Visual Pigments ◽  
Polarization Vision ◽  
Spatial Motion ◽  
Long Wavelength ◽  
Arthropod Species ◽  
Visual Systems ◽  
Opsin Genes

Stomatopod crustaceans possess some of the most complex animal visual systems, including at least 16 spectrally distinct types of photoreceptive units (e.g., assemblages of photoreceptor cells). Here we fully characterize the set of opsin genes expressed in retinal tissues and determine expression patterns of each in the stomatopod Neogonodactylus oerstedii. Using a combination of transcriptome and RACE sequencing, we identified 33 opsin transcripts expressed in each N. oerstedii eye, which are predicted to form 20 long-wavelength–sensitive, 10 middle-wavelength–sensitive, and three UV-sensitive visual pigments. Observed expression patterns of these 33 transcripts were highly unusual in five respects: 1) All long-wavelength and short/middle-wavelength photoreceptive units expressed multiple opsins, while UV photoreceptor cells expressed single opsins; 2) most of the long-wavelength photoreceptive units expressed at least one middle-wavelength–sensitive opsin transcript; 3) the photoreceptors involved in spatial, motion, and polarization vision expressed more transcripts than those involved in color vision; 4) there is a unique opsin transcript that is expressed in all eight of the photoreceptive units devoted to color vision; and 5) expression patterns in the peripheral hemispheres of the eyes suggest visual specializations not previously recognized in stomatopods. Elucidating the expression patterns of all opsin transcripts expressed in the N. oerstedii retina reveals the potential for previously undocumented functional diversity in the already complex stomatopod eye and is a first step toward understanding the functional significance of the unusual abundance of opsins found in many arthropod species’ visual systems.

scholarly journals Extraordinary diversity of visual opsin genes in dragonflies

2015 ◽  
Vol 112 (11) ◽  
pp. E1247-E1256 ◽  
Author(s):  
Ryo Futahashi ◽  
Ryouka Kawahara-Miki ◽  
Michiyo Kinoshita ◽  
Kazutoshi Yoshitake ◽  
Shunsuke Yajima ◽  
...  
Keyword(s):  
Expression Patterns ◽  
Compound Eyes ◽  
Light Conditions ◽  
Ventral Region ◽  
Long Wavelength ◽  
Spatiotemporal Expression ◽  
The Family ◽  
Opsin Genes ◽  
Molecular Phylogenetic ◽  
Visual Dependence

Dragonflies are colorful and large-eyed animals strongly dependent on color vision. Here we report an extraordinary large number of opsin genes in dragonflies and their characteristic spatiotemporal expression patterns. Exhaustive transcriptomic and genomic surveys of three dragonflies of the family Libellulidae consistently identified 20 opsin genes, consisting of 4 nonvisual opsin genes and 16 visual opsin genes of 1 UV, 5 short-wavelength (SW), and 10 long-wavelength (LW) type. Comprehensive transcriptomic survey of the other dragonflies representing an additional 10 families also identified as many as 15–33 opsin genes. Molecular phylogenetic analysis revealed dynamic multiplications and losses of the opsin genes in the course of evolution. In contrast to many SW and LW genes expressed in adults, only one SW gene and several LW genes were expressed in larvae, reflecting less visual dependence and LW-skewed light conditions for their lifestyle under water. In this context, notably, the sand-burrowing or pit-dwelling species tended to lack SW gene expression in larvae. In adult visual organs: (i) many SW genes and a few LW genes were expressed in the dorsal region of compound eyes, presumably for processing SW-skewed light from the sky; (ii) a few SW genes and many LW genes were expressed in the ventral region of compound eyes, probably for perceiving terrestrial objects; and (iii) expression of a specific LW gene was associated with ocelli. Our findings suggest that the stage- and region-specific expressions of the diverse opsin genes underlie the behavior, ecology, and adaptation of dragonflies.

scholarly journals Biological aspects of Hylesia metapyrrha (Lepidoptera; Saturniidae; Hemileucinae), in laboratory

2007 ◽  
Vol 67 (1) ◽  
pp. 173-177 ◽  
Author(s):  
A. Specht ◽  
AC. Formentini ◽  
E. Corseuil
Keyword(s):  
Life Cycle ◽  
Incubation Period ◽  
Adult Stage ◽  
Immature Stages ◽  
Average Period ◽  
Development Stages ◽  
Behavioral Aspects ◽  
Biological Aspects ◽  
Guava Leaves

The aim of this work was to study biological aspects and the life cycle of Hylesia Metapyrrha in a laboratory. Laboratorial breeding was made at 25 ± 1 °C, 70 ± 10% UR and 14 hours of photophase, feeding the larvae with guava leaves (Psidium guayava L. - Myrtaceae). Time was evaluated on the days of all the development stages; morphometry was evaluated in millimeters and the pupa’s mass in grams. The eggs were disposed in groups and covered by urticating abdominal hair. The incubation period lasted 52 days. The larvae, with gregarious habits, presented background black coloration, yellowish scoli and two orange longitudinal lines above and below the spiracles, during the development which lasted an average period of 74.59 days and went through seven instars. The pre-pupa and the pupa stages lasted on average 8.82 and 50.56 days, respectively; the female pupae presented a duration, weight and size which was significantly bigger. The adult stage lasted on average 5.50 days with periods of pre, post and oviposition of 2.30, 1.90 and 1.00 days, respectively. This study broadens the knowledge of the immature stages, biological, morphological and behavioral aspects, until then restricted to the morphology and to registers of the occurrence of the adult forms.

scholarly journals Novel Temporal Expression Patterns of EBF-Binding Proteins in Wing Morphs of The Grain Aphid Sitobion miscanthi

2021 ◽  
Vol 12 ◽  
Author(s):  
Siyu Zhang ◽  
Qian Zhang ◽  
Xin Jiang ◽  
Qian Li ◽  
Yaoguo Qin ◽  
...  
Keyword(s):  
Binding Proteins ◽  
Adult Stage ◽  
Expression Patterns ◽  
Adult Emergence ◽  
Temporal Expression ◽  
Grain Aphid ◽  
Significant Difference ◽  
Before And After ◽  
Temporal Expression Pattern ◽  
Odorant Binding

High chemosensitivity of insects to volatile organic compounds (VOC) stimuli is mediated by odorant binding proteins (OBPs). In aphids, three OBPs (OBP3, OBP7 and OBP9) are E-β-farnesene (EBF)-binding proteins. Winged aphids are generally more sensitive than wingless aphids to VOCs, thus, wing presence is a phenotypic correlate of olfaction sensitivity. Here, we investigate the detailed temporal expression of these EBF-binding proteins and two other OBPs (OBP6 and OBP10), in the grain aphid Sitobion miscanthi 0 h, 2 h, 1 day, 3 days, 10 days, and 20 days after adult emergence. Both winged and wingless aphids were examined to further uncover phenotypic specification. Then, the expression patterns before and after EBF induction were analyzed. Throughout adulthood, only OBP7 had significantly higher antennal expression in winged aphids; however, there was no significant difference in the antennal expression of OBP3 between wing morphs at most time points. Except it was lower in newly emerged winged aphids but increased rapidly to the same level in wingless aphids at 1 day. OBP9 did not differ in expression between the morphs and was the only OBP that did not exhibit an expression trough at the beginning of the adult stage (0 h). The expression of OBP9 remained relatively stable and high throughout the adult stage in both phenotypes, showing the highest level among the three EBF-binding proteins. After EBF induction, its expression was further up-regulated in both morphs. Therefore, this protein may be an important molecule for EBF recognition in aphids. OBP7 strongly responded to EBF but only in winged aphids, suggesting that this protein is important in the more sensitive EBF recognition process of winged aphids. In addition, the antennal expression level of OBP3 did not respond to EBF induction. These findings revealed a temporal expression pattern of OBPs in aphids and showed that figuring out the pattern is critical for correctly selecting morphs and sampling times, which will support the discovery of reliable findings and allow solid conclusions to be drawn. Our findings also inspire on the interaction mode of the three EBF-binding proteins in relation to EBF perception in aphids.

The ontogeny of ultraviolet sensitivity, cone disappearance and regeneration in the sockeye salmon Oncorhynchus nerka

2000 ◽  
Vol 203 (7) ◽  
pp. 1161-1172 ◽  
Author(s):  
I. Novales Flamarique
Keyword(s):  
Sockeye Salmon ◽  
Adult Stage ◽  
Salt Water ◽  
Oncorhynchus Nerka ◽  
The Other ◽  
Small Fish ◽  
Adult Fish ◽  
Long Wavelength ◽  
Electrophysiological Recordings ◽  
Ultraviolet Sensitivity

This study examines the spectral sensitivity and cone topography of the sockeye salmon Oncorhynchus nerka throughout its life history with special emphasis on ultraviolet sensitivity. Electrophysiological recordings from the optic nerve show that ultraviolet sensitivity is greatly diminished at the smolt stage but reappears in adult fish weighing about 201 g. Concomitantly, light microscopy observations of the retina show that ultraviolet cones disappear from the dorsal and temporal retina at the smolt stage but reappear at the adult stage. These changes occur for sockeye salmon raised in fresh water or salt water after smoltification. In contrast to this ultraviolet cycle, the other cone mechanisms (short-, middle- and long-wavelength-sensitive) and the rod mechanism remain present throughout ontogeny. The natural appearance and disappearance of ultraviolet cones in salmonid retinas follows surges in blood thyroxine at critical developmental periods. Their presence coincides with times of prominent feeding on zooplankton and/or small fish that may be more visible under ultraviolet light. It is proposed that the primary function of ultraviolet cones in salmonids is to improve prey contrast.

Diagnosing declining grassland wader populations using simple matrix models

2009 ◽  
Vol 59 (1) ◽  
pp. 127-144 ◽  
Author(s):  
Lia Hemerik ◽  
Chris Klok ◽  
Maja Roodbergen
Keyword(s):  
Growth Rate ◽  
Population Growth ◽  
Matrix Models ◽  
Population Growth Rate ◽  
Adult Stage ◽  
Demographic Data ◽  
Leslie Matrix ◽  
Adult Survival ◽  
Demographic Parameters ◽  
Survival And Reproduction

AbstractMany populations of wader species have shown a strong decline in number in Western-Europe in recent years. The use of simple population models such as matrix models can contribute to conserve these populations by identifying the most profitable management measures. Parameterization of such models is often hampered by the availability of demographic data (survival and reproduction). In particular, data on survival in the pre-adult (immature) stage of wader species that remain in wintering areas outside Europe are notoriously difficult to obtain, and are therefore virtually absent in the literature. To diagnose population decline in the wader species; Black-tailed Godwit, Curlew, Lapwing, Oystercatcher, and Redshank, we extended an existing modelling framework in which incomplete demographic data can be analysed, developed for species with a pre-adult stage of one year. The framework is based on a Leslie matrix model with three parameters: yearly reproduction (number of fledglings per pair), yearly pre-adult (immature) and yearly adult (mature) survival. The yearly population growth rate of these populations and the relative sensitivity of this rate to changes in survival and reproduction parameters (the elasticity) were calculated numerically and, if possible, analytically. The results showed a decrease in dependence on reproduction and an increase in pre-adult survival of the population growth rate with an increase in the duration of the pre-adult stage. In general, adult survival had the highest elasticity, but elasticity of pre-adult survival increased with time to first reproduction, a result not reported earlier. Model results showed that adult survival and reproduction estimates reported for populations of Redshank and Curlew were too low to maintain viable populations. Based on the elasticity patterns and the scope for increase in actual demographic parameters we inferred that conservation of the Redshank and both Curlew populations should focus on reproduction. For one Oystercatcher and the Black-tailed Godwit populations we suggested a focus on both reproduction and pre-adult survival. For the second Oystercatcher population pre-adult survival seemed the most promising target for conservation. And for the Lapwing populations all demographic parameters should be considered.

Measurements of Morphology and Locomotion of Caenorhabditis Elegans With Digital Holographic Microscopy

2020 ◽  
Author(s):  
Yijie Wang ◽  
Jun Chen ◽  
Yuan Zhang ◽  
Kee-Hong Kim
Keyword(s):  
Caenorhabditis Elegans ◽  
Zebrafish Embryo ◽  
Adult Stage ◽  
Experimental Studies ◽  
Digital Holographic Microscopy ◽  
Development Stages ◽  
C Elegans ◽  
Applied Development ◽  
Time Period ◽  
Holographic Microscopy

Abstract Digital holographic microscopy (DHM) enables 3D volumetric measurements of small objects with high magnification. DHM has been applied to measure a variety of experimental studies, including turbulent boundary layer, spray droplets, individual cells, development of zebrafish embryo, etc. In this study, a DHM system is applied to measure the morphology and locomotion of two groups of Caenorhabditis Elegans (C. Elegans) with different development conditions (ATGL-1 group and n2 group) in an 8-day time period from their hatching to the adult stage, whose body lengths range from hundreds of micrometers to one millimeter. The length and volume are determined to describe the morphology of the C. Elegans at different development stages. The locomotion of the C. Elegans is divided into linear motion and curl motion. The kinetic energy derived from the two types of motion describes the extent of how active the C. Elegans is. The statistics of morphology and locomotion of the two groups of C. Elegans are compared at different development stages to illustrate the influence of the applied development conditions.

scholarly journals Lipid Dynamics, Identification, and Expression Patterns of Fatty Acid Synthase Genes in an Endoparasitoid, Meteorus pulchricornis (Hymenoptera: Braconidae)

2020 ◽  
Vol 21 (17) ◽  
pp. 6228
Author(s):  
Jiao Wang ◽  
Li-Wei Shen ◽  
Xiao-Rong Xing ◽  
Yu-Qi Xie ◽  
Yi-Jiangcheng Li ◽  
...  
Keyword(s):  
Fatty Acid ◽  
Lipid Content ◽  
Fatty Acid Synthase ◽  
Developmental Stages ◽  
Adult Stage ◽  
Expression Patterns ◽  
Lipid Synthesis ◽  
Open Reading Frames ◽  
Lipid Dynamics ◽  
Meteorus Pulchricornis

In insect parasitoids, fatty acid synthases (FASs) have received less attention and their roles associated with lipogenesis loss are far from clear. Meteorus pulchricornis is a solitary endoparasitoid wasp of many larvae of lepidopteran pests. The lipid content during developmental stages of M. pulchricornis was measured; it was higher in the larval and pupal stages but declined from six-day-old pupae. Lipid accumulation constantly decreased in the adult stage, even after feeding on honey solutions. To investigate the roles of FASs in lipid synthesis in M. pulchricornis, four FAS genes (MpulFAS1~4) were identified from the transcriptome database of M. pulchricornis. All FAS genes included full-length open reading frames and shared 72–79% similarity with the sequences of Microplitis demolitor. qRT-PCR validation showed that all four FASs had the highest expression after the adult wasps were fed on honey diets. MpulFAS1 and MpulFAS2 reached their expression peaks at the adult stage but MpulFAS3 and MpulFAS4 peaked at the larval stage. To further study the function of FASs, dsRNA injection knocked down the expression of four MpulFASs and resulted in a significant decline of lipid content at the adult stage in M. pulchricornis. Results from this study suggest that M. pulchricornis adults cannot accumulate lipid content effectively and FASs may still contribute to lipid synthesis in the adult stage. This broadens the knowledge on the ability of lipid synthesis in parasitoid wasps and provides insight into the roles of FASs in insects with parasitic life-history traits.

scholarly journals IGF2BP1 Reverses Hemoglobin Switching in Adult Erythroblasts

Blood ◽  
2015 ◽  
Vol 126 (23) ◽  
pp. 639-639
Author(s):  
Laxminath Tumburu ◽  
Colleen Byrnes ◽  
Y. Terry Lee ◽  
Jaira F. de Vasconcellos ◽  
Antoinette Rabel ◽  
...  
Keyword(s):  
Gene Expression ◽  
Adult Stage ◽  
Globin Gene ◽  
Expression Patterns ◽  
Beta Globin ◽  
Globin Mrna ◽  
Beta Globin Gene ◽  
Empty Vector ◽  
Cd34 Cells ◽  
Gene And Protein Expression

Abstract During human ontogeny, high-level transcription within the beta-globin gene cluster switches sequentially from embryonic-to-fetal-to-adult genes. Beta-thalassemias and sickle-cell disease are manifested by reduced or mutated expression of the adult-stage, beta-globin gene. Research is aimed toward the eventual therapeutic goal of safely preventing or reversing the fetal-to-adult hemoglobin switch among these patient populations. To identify genes that may be involved in regulation of the fetal-to-adult erythroid switch, purified CD34(+) cells from six umbilical cord (fetal) and six adult peripheral blood samples were cultured in serum-free medium, and gene expression libraries were prepared and sequenced from CD71(+), CD235a(+) erythroblast mRNA. In total, 546 million paired-end reads with a length of 101bp were generated for a comparison of cord and adult erythroblast transcriptomes. Reads were aligned to the human reference genome (hg19), and differential gene expression was identified [false discovery rate ≤ 0.05, fold change ≥ 1.5, and reads per kilobase per million mapped reads (RPKM) ≥ 0.5]. A total of 145 genes were differentially expressed according to these criteria, with four of the top five encoding targets of the let-7 family of microRNAs. The topmost gene was insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1), which is normally involved in transcriptome regulation and developmental timing. IGF2BP1 expression was 770-fold increased in the fetal erythroblasts (RPKM > 3.0) compared with low background levels in adult erythroblasts (RPKM < 0.01). IGF2BP1 protein is present in fetal tissues including fetal liver; however, it is not detected in adult human bone marrow. A potential role for adult-stage IGF2BP1 over-expression (IGF2BP1-OE) in the regulation of globin genes and proteins was explored using lentiviral vectors designed for let-7 resistant, erythroid-specific expression of IGF2BP1 protein. IGF2BP1-OE transduced CD34(+) cells expressed the transgenic protein and maintained their ability to differentiate, accumulate hemoglobin, and enucleate ex vivo in the presence of erythropoietin. Globin mRNA and protein levels were investigated. While alpha-globin mRNA remained unchanged, gamma-globin mRNA became predominant [90% of (gamma + beta) mRNA] in IGF2BP1-OE samples [Control (empty vector) = 3.2E+06 ± 8.2E+05 copies/ng; IGF2BP1-OE = 2.0E+07 ± 5.9E+06 copies/ng; p < 0.05], and beta-globin mRNA decreased to minor levels [Control (empty vector) = 2.2E+07 ± 4.0E+06 copies/ng; IGF2BP1-OE = 2.2E+06 ± 6.2E+05 copies/ng; p < 0.05]. IGF2BP1-OE caused a pan-cellular HbF distribution by flow cytometry. Cellular fetal hemoglobin percentages [HbF/(HbF + HbA)] were measured as 5.3 ± 0.4% in donor matched control cells versus 80.3 ± 3.7% in IGF2BP1-OE cells (p < 0.05). HPLC tracings revealed that the minor HbA2 peak, composed of alpha and delta globin chains, was reduced or absent in IGF2BP1-OE. Also, IGF2BP1-OE suppressed the expression of related genes including the transcription factor BCL11A. These data demonstrate that erythroblast IGF2BP1 is silenced in humans during fetal-to-adult ontogeny, and that IGF2BP1 in adult erythroblasts reverses the developmentally related switch in beta-like globin gene and protein expression patterns. Disclosures No relevant conflicts of interest to declare.

scholarly journals Genome-Wide Analysis of the CCT Gene Family in Chinese White Pear (Pyrus Bretschneideri Rehd.) and Characterization of PbPRR2 in Response to Varying Light Signals

2021 ◽  
Author(s):  
Zheng Liu ◽  
Jia-Li Liu ◽  
Lin An ◽  
Tao Wu ◽  
Li Yang ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Profiles ◽  
Expression Patterns ◽  
Functional Characterization ◽  
Light Response ◽  
Purifying Selection ◽  
Photosynthetic Performance ◽  
Negative Regulator ◽  
Canopy Architecture ◽  
Genome Wide

Abstract Background: Canopy architecture is critical in determining the light environment, and subsequently the photosynthetic productivity of fruit crops. Numerous CCT domain-containing genes are crucial for plant adaptive responses to diverse environmental cues. Due to the biological importance of CCT genes, many researchers have focused on their functional characterization. However, little information was available about the CCT genes (PbCCTs) of pear, an important fruit crop.Results: Genome-wide sequence analysis identified 42 putative PbCCTs in the genome of pear (Pyrus bretschneideri Rehd.). Phylogenetic analysis indicated these genes were divided into five subfamilies, namely, COL (14 members), PRR (8 members), ZIM (6 members), TCR1 (6 members) and ASML2 (8 members). Analysis of exon-intron structures and conserved domains provided support for the classification. Genome duplication analysis indicated that segmental duplication events played a crucial role in the expansion of the CCT family in pear, and that the CCT family evolved under the effect of purifying selection. Expression profiles exhibited diverse expression patterns of PbCCTs in various tissues and in response to varying red and blue light. Additionally, transient overexpression of PbPRR2 in Nicotiana benthamiana leaves resulted in inhibition of photosynthetic performance, suggesting that PbPRR2 may be a negative regulator of photosynthesis. Conclusions:This study provides a comprehensive analysis of the CCT gene family in pear and will facilitate further functional investigations of the PbCCTs to uncover their biological roles in light response.

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