scholarly journals A Deep-Learning-Based Framework for Automated Diagnosis of COVID-19 Using X-ray Images

Information ◽  
2020 ◽  
Vol 11 (9) ◽  
pp. 419 ◽  
Author(s):  
Irfan Ullah Khan ◽  
Nida Aslam
Keyword(s):  
Deep Learning ◽  
False Negative ◽  
False Negative Rate ◽  
Complex Nature ◽  
Learning Models ◽  
Daily Lives ◽  
X Ray ◽  
High False Negative Rate ◽  
Diagnosis Method ◽  
Novel Coronavirus

The emergence and outbreak of the novel coronavirus (COVID-19) had a devasting effect on global health, the economy, and individuals’ daily lives. Timely diagnosis of COVID-19 is a crucial task, as it reduces the risk of pandemic spread, and early treatment will save patients’ life. Due to the time-consuming, complex nature, and high false-negative rate of the gold-standard RT-PCR test used for the diagnosis of COVID-19, the need for an additional diagnosis method has increased. Studies have proved the significance of X-ray images for the diagnosis of COVID-19. The dissemination of deep-learning techniques on X-ray images can automate the diagnosis process and serve as an assistive tool for radiologists. In this study, we used four deep-learning models—DenseNet121, ResNet50, VGG16, and VGG19—using the transfer-learning concept for the diagnosis of X-ray images as COVID-19 or normal. In the proposed study, VGG16 and VGG19 outperformed the other two deep-learning models. The study achieved an overall classification accuracy of 99.3%.

scholarly journals Detecting Coronavirus from Chest X-rays Using Transfer Learning

COVID ◽  
2021 ◽  
Vol 1 (1) ◽  
pp. 403-415
Author(s):  
Abeer Badawi ◽  
Khalid Elgazzar
Keyword(s):  
Deep Learning ◽  
Binary Classification ◽  
Healthcare Providers ◽  
Large Set ◽  
X Rays ◽  
Learning Models ◽  
X Ray ◽  
Chest X Ray ◽  
Multi Class Classification ◽  
Novel Coronavirus

Coronavirus disease (COVID-19) is an illness caused by a novel coronavirus family. One of the practical examinations for COVID-19 is chest radiography. COVID-19 infected patients show abnormalities in chest X-ray images. However, examining the chest X-rays requires a specialist with high experience. Hence, using deep learning techniques in detecting abnormalities in the X-ray images is presented commonly as a potential solution to help diagnose the disease. Numerous research has been reported on COVID-19 chest X-ray classification, but most of the previous studies have been conducted on a small set of COVID-19 X-ray images, which created an imbalanced dataset and affected the performance of the deep learning models. In this paper, we propose several image processing techniques to augment COVID-19 X-ray images to generate a large and diverse dataset to boost the performance of deep learning algorithms in detecting the virus from chest X-rays. We also propose innovative and robust deep learning models, based on DenseNet201, VGG16, and VGG19, to detect COVID-19 from a large set of chest X-ray images. A performance evaluation shows that the proposed models outperform all existing techniques to date. Our models achieved 99.62% on the binary classification and 95.48% on the multi-class classification. Based on these findings, we provide a pathway for researchers to develop enhanced models with a balanced dataset that includes the highest available COVID-19 chest X-ray images. This work is of high interest to healthcare providers, as it helps to better diagnose COVID-19 from chest X-rays in less time with higher accuracy.

scholarly journals COVIDPEN: A Novel COVID-19 Detection Model using Chest X-Rays and CT Scans

2020 ◽  
Author(s):  
Amit Kumar Jaiswal ◽  
Prayag Tiwari ◽  
Vipin Kumar Rathi ◽  
Jia Qian ◽  
Hari Mohan Pandey ◽  
...  
Keyword(s):  
False Negative ◽  
Healthcare Providers ◽  
False Negative Rate ◽  
X Rays ◽  
X Ray ◽  
Detection Model ◽  
Global Pandemic ◽  
High False Negative Rate ◽  
Proposed Model ◽  
Chest X Ray

The trending global pandemic of COVID-19 is the fastest ever impact which caused people worldwide by severe acute respiratory syndrome~(SARS)-driven coronavirus. However, several countries suffer from the shortage of test kits and high false negative rate in PCR test. Enhancing the chest X-ray or CT detection rate becomes critical. The patient triage is of utmost importance and the use of machine learning can drive the diagnosis of chest X-ray or CT image by identifying COVID-19 cases. To tackle this problem, we propose~COVIDPEN~-~a transfer learning approach on Pruned EfficientNet-based model for the detection of COVID-19 cases. The proposed model is further interpolated by post-hoc analysis for the explainability of the predictions. The effectiveness of our proposed model is demonstrated on two systematic datasets of chest radiographs and computed tomography scans. Experimental results with several baseline comparisons show that our method is on par and confers clinically explicable instances, which are meant for healthcare providers.

scholarly journals Finding COVID-19 from Chest X-rays using Deep Learning on a Small Dataset

2020 ◽  
Author(s):  
Lawrence Hall ◽  
Dmitry Goldgof ◽  
Rahul Paul ◽  
Gregory M. Goldgof
Keyword(s):  
Deep Learning ◽  
Bacterial Pneumonia ◽  
False Negative ◽  
False Negative Rate ◽  
X Rays ◽  
Test Results ◽  
X Ray ◽  
Chest X Ray ◽  
Small Dataset ◽  
Children Under 5

<p>Testing for COVID-19 has been unable to keep up with the demand. Further, the false negative rate is projected to be as high as 30% and test results can take some time to obtain. X-ray machines are widely available and provide images for diagnosis quickly. This paper explores how useful chest X-ray images can be in diagnosing COVID-19 disease. We have obtained 122 chest X-rays of COVID-19 and over 4,000 chest X-rays of viral and bacterial pneumonia. Unfortunately, we missed the fact that the chest X-rays of viral and bacterial pneumonia came from children under 5 years old. So, this work shows that you can tell kids with pneumonia from COVID-19 adult cases which is not anyone's goal. However, data from adult chest X-rays of other causes of lung disease is needed to see if you can tell adult diseases apart.<br></p>

Covid-19 Detection using Deep Convolutional Neural Networks from X-Ray Images

2021 ◽  
Vol 4 (2) ◽  
pp. 139-143
Author(s):  
Abdullah Ajmal ◽  
Sundas Ibrar ◽  
Wakeel Ahmad ◽  
Syed Muhammad Adnan Shah
Keyword(s):  
Deep Learning ◽  
Global Economy ◽  
Data Augmentation ◽  
Diagnostic Techniques ◽  
Deep Convolutional Neural Networks ◽  
Data Set ◽  
Daily Lives ◽  
X Ray ◽  
The World ◽  
Novel Coronavirus

Abstract— The Novel Coronavirus generally, knows as COVID-19 which first appeared in Wuhan city of China in December 2019, spread quickly around the world and became a pandemic. It has caused an overwhelming effect on daily lives, Public health, and the global economy. Many people have been affected and have died. It is critical to control and prevent the spread of COVID-19 disease by applying quick alternative diagnostic techniques. COVID-19 cases are rising day by day around the world, the on-time diagnosis of COVID-19 patients is an increasingly long and difficult process. COVID-19 patient test kits are costly and not available for every individual in poor countries. For this purpose, screening patients with the established techniques like Chest X-ray images seems to be an effective method. This study used a deep learning data augmentation on a publicly available data set and train advanced CNN models on it. The proposed model was tested using a state-of-the-art evaluation measures and obtained better results. Our model, the COVID-19 images is available at (https://github.com/ieee8023/covid-chestxray-dataset) and for Non-COVID-19 images is available at (https://www.kaggle.com/paultimothymooney/chest-xray-pneumonia). The maximum accuracy achieved in the validation was 96.67%. Our model of COVID-19 detection achieved an average F measure of 98%, and an Area Under Curve (AUC) of 99%. The results demonstrate that deep learning proved to be an effective and easily deployable approach for COVID-19 detection.

scholarly journals Early Detection of The Advanced Persistent Threats Attacks Using Performance Analysis of Deep Learning

2020 ◽  
Author(s):  
Javad Hassannataj Joloudari ◽  
Mojtaba Haderbadi ◽  
Amir Mashmool ◽  
Mohammad GhasemiGol ◽  
Shahaboddin Shamshirband ◽  
...  
Keyword(s):  
Deep Learning ◽  
Decision Tree ◽  
Bayesian Network ◽  
False Positive Rate ◽  
False Negative ◽  
False Negative Rate ◽  
Learning Models ◽  
Data Set ◽  
Advanced Persistent Threats ◽  
C5.0 Decision Tree

One of the most common and important destructive attacks on the victim system is Advanced Persistent Threats (APT)-attack. The APT attacker can achieve his hostile goals by obtaining information and gaining financial benefits regarding the infrastructure of a network. One of the solutions to detect a secret APT attack is using network traffic. Due to the nature of the APT attack in terms of being on the network for a long time and the fact that the network may crash because of high traffic, it is difficult to detect this type of attack. Hence, in this study, machine learning methods such as C5.0 decision tree, Bayesian network and deep neural network are used for timely detection and classification of APT-attacks on the NSL-KDD data set. Moreover, 10-fold cross validation method is used to experiment these models. As a result, the accuracy (ACC) of the C5.0 decision tree, Bayesian network and 6-layer deep learning models is obtained as 95.64%, 88.37% and 98.85%, respectively, and also, in terms of the important criterion of the false positive rate (FPR), the FPR value for the C5.0 decision tree, Bayesian network and 6-layer deep learning models is obtained as 2.56, 10.47 and 1.13, respectively. Other criterions such as sensitivity, specificity, accuracy, false negative rate and F-measure are also investigated for the models, and the experimental results show that the deep learning model with automatic multi-layered extraction of features has the best performance for timely detection of an APT-attack comparing to other classification models.

COVID-19 Detection Using Chest X-Ray and Transfer Learning

2021 ◽  
pp. 171-186
Author(s):  
Aditya Sharma ◽  
Arshdeep Singh Chudey ◽  
Mrityunjay Singh
Keyword(s):  
Performance Evaluation ◽  
Deep Learning ◽  
Confusion Matrix ◽  
Receiver Operating Curve ◽  
The Novel ◽  
Learning Models ◽  
X Ray ◽  
Major Outbreak ◽  
Chest X Ray ◽  
Novel Coronavirus

The novel coronavirus (COVID-19), which started in the Wuhan province of China, prompted a major outbreak that culminated in a worldwide pandemic. Several cases are being recorded across the globe, with deaths being close to 2.5 million. The increased number of cases and the newness of such a pandemic has resulted in the hospitals being under-equipped leading to problems in diagnosis of the disease. From previous studies, radiography has proved to be the fastest testing method. A screening test using the x-ray scan of the chest region has proved to be effective. For this method, a trained radiologist is needed to detect the disease. Automating this process using deep learning models can prove to be effective. Due to the lack of large dataset, pre-trained CNN models are used in this study. Several models have been employed like VGG-16, Resnet-50, InceptionV3, and InceptionResnetV2. Resnet-50 provided the best accuracy of 98.3%. The performance evaluation has been done using metrics like receiver operating curve and confusion matrix.

scholarly journals Vulnerability in Deep Transfer Learning Models to Adversarial Fast Gradient Sign Attack for COVID-19 Prediction from Chest Radiography Images

2021 ◽  
Vol 11 (9) ◽  
pp. 4233
Author(s):  
Biprodip Pal ◽  
Debashis Gupta ◽  
Md. Rashed-Al-Mahfuz ◽  
Salem A. Alyami ◽  
Mohammad Ali Moni
Keyword(s):  
Deep Learning ◽  
Transfer Learning ◽  
Chest Radiography ◽  
High Sensitivity ◽  
Ct Images ◽  
Classification Performance ◽  
Learning Models ◽  
X Ray ◽  
Image Capturing ◽  
Fast Gradient

The COVID-19 pandemic requires the rapid isolation of infected patients. Thus, high-sensitivity radiology images could be a key technique to diagnose patients besides the polymerase chain reaction approach. Deep learning algorithms are proposed in several studies to detect COVID-19 symptoms due to the success in chest radiography image classification, cost efficiency, lack of expert radiologists, and the need for faster processing in the pandemic area. Most of the promising algorithms proposed in different studies are based on pre-trained deep learning models. Such open-source models and lack of variation in the radiology image-capturing environment make the diagnosis system vulnerable to adversarial attacks such as fast gradient sign method (FGSM) attack. This study therefore explored the potential vulnerability of pre-trained convolutional neural network algorithms to the FGSM attack in terms of two frequently used models, VGG16 and Inception-v3. Firstly, we developed two transfer learning models for X-ray and CT image-based COVID-19 classification and analyzed the performance extensively in terms of accuracy, precision, recall, and AUC. Secondly, our study illustrates that misclassification can occur with a very minor perturbation magnitude, such as 0.009 and 0.003 for the FGSM attack in these models for X-ray and CT images, respectively, without any effect on the visual perceptibility of the perturbation. In addition, we demonstrated that successful FGSM attack can decrease the classification performance to 16.67% and 55.56% for X-ray images, as well as 36% and 40% in the case of CT images for VGG16 and Inception-v3, respectively, without any human-recognizable perturbation effects in the adversarial images. Finally, we analyzed that correct class probability of any test image which is supposed to be 1, can drop for both considered models and with increased perturbation; it can drop to 0.24 and 0.17 for the VGG16 model in cases of X-ray and CT images, respectively. Thus, despite the need for data sharing and automated diagnosis, practical deployment of such program requires more robustness.

scholarly journals High mortality with High false negative rate: COVID-19 infection in patients with hematologic malignancies

2021 ◽  
Vol 106 ◽  
pp. 106582
Author(s):  
Alex Niu ◽  
Bo Ning ◽  
Francisco Socola ◽  
Hana Safah ◽  
Tim Reynolds ◽  
...  
Keyword(s):  
High Mortality ◽  
False Negative ◽  
False Negative Rate ◽  
Hematologic Malignancies ◽  
Negative Rate ◽  
High False Negative Rate

scholarly journals False Negative Mitigation in Group Testing for COVID-19 Screening

2021 ◽  
Vol 8 ◽  
Author(s):  
Amir Reza Alizad Rahvar ◽  
Safar Vafadar ◽  
Mehdi Totonchi ◽  
Mehdi Sadeghi
Keyword(s):  
Viral Load ◽  
False Negative ◽  
Group Testing ◽  
False Negative Rate ◽  
Screening Strategy ◽  
Web Interface ◽  
Rt Pcr ◽  
Promising Candidate ◽  
Testing Method ◽  
High False Negative Rate

After lifting the COVID-19 lockdown restrictions and opening businesses, screening is essential to prevent the spread of the virus. Group testing could be a promising candidate for screening to save time and resources. However, due to the high false-negative rate (FNR) of the RT-PCR diagnostic test, we should be cautious about using group testing because a group's false-negative result identifies all the individuals in a group as uninfected. Repeating the test is the best solution to reduce the FNR, and repeats should be integrated with the group-testing method to increase the sensitivity of the test. The simplest way is to replicate the test twice for each group (the 2Rgt method). In this paper, we present a new method for group testing (the groupMix method), which integrates two repeats in the test. Then we introduce the 2-stage sequential version of both the groupMix and the 2Rgt methods. We compare these methods analytically regarding the sensitivity and the average number of tests. The tradeoff between the sensitivity and the average number of tests should be considered when choosing the best method for the screening strategy. We applied the groupMix method to screening 263 people and identified 2 infected individuals by performing 98 tests. This method achieved a 63% saving in the number of tests compared to individual testing. Our experimental results show that in COVID-19 screening, the viral load can be low, and the group size should not be more than 6; otherwise, the FNR increases significantly. A web interface of the groupMix method is publicly available for laboratories to implement this method.

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