scholarly journals Selection and Characterization of YKL-40-Targeting Monoclonal Antibodies from Human Synthetic Fab Phage Display Libraries

2020 ◽  
Vol 21 (17) ◽  
pp. 6354
Author(s):  
Kyungjae Kang ◽  
Kicheon Kim ◽  
Se-Ra Lee ◽  
Yoonji Kim ◽  
Joo Eon Lee ◽  
...  

YKL-40, also known as chitinase-3-like 1 (CHI3L1), is a glycoprotein that is expressed and secreted by various cell types, including cancers and macrophages. Due to its implications for and upregulation in a variety of diseases, including inflammatory conditions, fibrotic disorders, and tumor growth, YKL-40 has been considered as a significant therapeutic biomarker. Here, we used a phage display to develop novel monoclonal antibodies (mAbs) targeting human YKL-40 (hYKL-40). Human synthetic antibody phage display libraries were panned against a recombinant hYKL-40 protein, yielding seven unique Fabs (Antigen-binding fragment), of which two Fabs (H1 and H2) were non-aggregating and thermally stable (75.5 °C and 76.5 °C, respectively) and had high apparent affinities (KD = 2.3 nM and 4.0 nM, respectively). Reformatting the Fabs into IgGs (Immunoglobulin Gs) increased their apparent affinities (notably, for H1 and H2, KD = 0.5 nM and 0.3 nM, respectively), presumably due to the effects of avidity, with little change to their non-aggregation property. The six anti-hYKL-40 IgGs were analyzed using a trans-well migration assay in vitro, revealing that three clones (H1, H2, and H4) were notably effective in reducing cell migration from both A549 and H460 lung cancer cell lines. The three clones were further analyzed in an in vivo animal test that assessed their anti-cancer activities, demonstrating that the tumor area and the number of tumor nodules were significantly reduced in the lung tissues treated with H1 (IgG). Given its high affinity and desirable properties, we expect that the H1 anti-hYKL-40 mAb will be a suitable candidate for developing anti-cancer therapeutics.

Author(s):  
Kristian Daniel Ralph Roth ◽  
Esther Veronika Wenzel ◽  
Maximilian Ruschig ◽  
Stephan Steinke ◽  
Nora Langreder ◽  
...  

Antibodies are essential molecules for diagnosis and treatment of diseases caused by pathogens and their toxins. Antibodies were integrated in our medical repertoire against infectious diseases more than hundred years ago by using animal sera to treat tetanus and diphtheria. In these days, most developed therapeutic antibodies target cancer or autoimmune diseases. The COVID-19 pandemic was a reminder about the importance of antibodies for therapy against infectious diseases. While monoclonal antibodies could be generated by hybridoma technology since the 70ies of the former century, nowadays antibody phage display, among other display technologies, is robustly established to discover new human monoclonal antibodies. Phage display is an in vitro technology which confers the potential for generating antibodies from universal libraries against any conceivable molecule of sufficient size and omits the limitations of the immune systems. If convalescent patients or immunized/infected animals are available, it is possible to construct immune phage display libraries to select in vivo affinity-matured antibodies. A further advantage is the availability of the DNA sequence encoding the phage displayed antibody fragment, which is packaged in the phage particles. Therefore, the selected antibody fragments can be rapidly further engineered in any needed antibody format according to the requirements of the final application. In this review, we present an overview of phage display derived recombinant antibodies against bacterial, viral and eukaryotic pathogens, as well as microbial toxins, intended for diagnostic and therapeutic applications.


Pharmaceutics ◽  
2020 ◽  
Vol 12 (3) ◽  
pp. 261
Author(s):  
Wei Mao ◽  
Sol Lee ◽  
Ji Un Shin ◽  
Hyuk Sang Yoo

Surface initiated atom transfer radical polymerization (SI-ATRP) documented a simple but efficient technique to grow a dense polymer layer on any surface. Gold nanoparticles (AuNPs) give a broad surface to immobilize sulfhyryl group-containing initiators for SI-ATRP; in addition, AuNPs are the major nanoparticulate carriers for delivery of anti-cancer therapeutics, since they are biocompatible and bioinert. In this work, AuNPs with a disulfide initiator were polymerized with sulfoethyl methacrylate by SI-ATRP to decorate the particles with anionic corona, and branched polyethyeleneimine (PEI) and siRNA were sequentially layered onto the anionic corona of AuNP by electrostatic interaction. The in vitro anti-cancer effect confirmed that AuNP with anionic corona showed higher degrees of apoptosis as well as suppression of the oncogene expression in a siRNA dose-dependent manner. The in vivo study of tumor-bearing nude mice revealed that mice treated with c-Myc siRNA-incorporated AuNPs showed dramatically decreased tumor size in comparison to those with free siRNA for 4 weeks. Furthermore, histological examination and gene expression study revealed that the decorated AuNP significantly suppressed c-Myc expression. Thus, we envision that the layer-by-layer assembly on the anionic brushes can be potentially used to incorporate nucleic acids onto metallic particles with high transfection efficiency.


2014 ◽  
Vol 116 (5) ◽  
pp. 1322-1333 ◽  
Author(s):  
R.A. Bernedo-Navarro ◽  
M.M. Miyachiro ◽  
M.J. da Silva ◽  
C.F. Reis ◽  
R.A. Conceição ◽  
...  

2021 ◽  
Author(s):  
Mengmeng Liu ◽  
Yue Pan ◽  
Xufeng Tao ◽  
Ning Li ◽  
Kun Li ◽  
...  

Abstract BackgroundPDAC is universally acknowledged to be one of the highest mortality rate of cancer-related deaths. PCSCs, regulated by EMT, could promote the proliferation of PDAC. Berberine with high medicinal value has usually been used as an anti-cancer agent. Hence the purpose of this study is to investigate the anti-cancer effect of berberine in PDAC. MethodsMTT assay was used to verify berberine inhibiting the proliferation of PDAC. Immunofluorescence staining, stem cell sphere, wound healing and transwell migration assay were demonstrated the anti-proliferation and anti-stemness of PCSCs in vitro . PANC-02 cells were injected in C57BL/6 mice to establish the orthotopic pancreatic-cancer model in vivo . H&E and Ki67 immunohistogical staining assay were used to evaluated the effect of berberine in PDAC in vivo. q-PCR and Western blot methods were applied to detect the expression of EMT procedure.ResultsIn this study, berberine has selective anti-cancer effect in PDAC in vitro . Moreover, berberine suppressed the proliferation and stemness of PCSCs in PDAC. In vivo , berberine reduced the tumor size and decreased the expression of Ki67 in orthotopic pancreatic-cancer pancreases. In addition, berberine inhibit the EMT signaling pathway both in vitro and in vivo . ConclusionsOur study indicates that berberine inhibit the proliferation of PDAC in vivo and vitro . The mechanism of anti-cancer effect on berberine may suppress the PCSCs through inhibiting EMT procedure. Therefore, berberine may be the novel antineoplastic drug with clinical effectiveness in PDAC. Keywords: Berberine, PDAC, PCSCs, EMT, berberine


2020 ◽  
Vol 27 (21) ◽  
pp. 3448-3462
Author(s):  
Marco Piccoli ◽  
Andrea Ghiroldi ◽  
Michelle M. Monasky ◽  
Federica Cirillo ◽  
Giuseppe Ciconte ◽  
...  

The development of new therapeutic applications for adult and embryonic stem cells has dominated regenerative medicine and tissue engineering for several decades. However, since 2006, induced Pluripotent Stem Cells (iPSCs) have taken center stage in the field, as they promised to overcome several limitations of the other stem cell types. Nonetheless, other promising approaches for adult cell reprogramming have been attempted over the years, even before the generation of iPSCs. In particular, two years before the discovery of iPSCs, the possibility of synthesizing libraries of large organic compounds, as well as the development of high-throughput screenings to quickly test their biological activity, enabled the identification of a 2,6-disubstituted purine, named reversine, which was shown to be able to reprogram adult cells to a progenitor-like state. Since its discovery, the effect of reversine has been confirmed on different cell types, and several studies on its mechanism of action have revealed its central role in inhibitory activity on several kinases implicated in cell cycle regulation and cytokinesis. These key features, together with its chemical nature, suggested a possible use of the molecule as an anti-cancer drug. Remarkably, reversine exhibited potent cytotoxic activity against several tumor cell lines in vitro and a significant effect in decreasing tumor progression and metastatization in vivo. Thus, 15 years since its discovery, this review aims at critically summarizing the current knowledge to clarify the dual role of reversine as a dedifferentiating agent and anti-cancer drug.


Cancers ◽  
2019 ◽  
Vol 11 (2) ◽  
pp. 222 ◽  
Author(s):  
Yusuf Haggag ◽  
Kyle Matchett ◽  
Robert Falconer ◽  
Mohammad Isreb ◽  
Jason Jones ◽  
...  

The delivery of anticancer agents to their subcellular sites of action is a significant challenge for effective cancer therapy. Peptides, which are integral to several oncogenic pathways, have significant potential to be utilised as cancer therapeutics due to their selectivity, high potency and lack of normal cell toxicity. Novel Ras protein-Regulator of chromosome condensation 1 (Ran-RCC1) inhibitory peptides designed to interact with Ran, a novel therapeutic target in breast cancer, were delivered by entrapment into polyethylene glycol-poly (lactic-co-glycolic acid) PEG-PLGA polymeric nanoparticles (NPs). A modified double emulsion solvent evaporation technique was used to optimise the physicochemical properties of these peptide-loaded biodegradable NPs. The anti-cancer activity of peptide-loaded NPs was studied in vitro using Ran-expressing metastatic breast (MDA-MB-231) and lung cancer (A549) cell lines, and in vivo using Solid Ehrlich Carcinoma-bearing mice. The anti-metastatic activity of peptide-loaded NPs was investigated using migration, invasion and colony formation assays in vitro. A PEG-PLGA-nanoparticle encapsulating N-terminal peptide showed a pronounced antitumor and anti-metastatic action in lung and breast cancer cells in vitro and caused a significant reduction of tumor volume and associated tumor growth inhibition of breast cancer model in vivo. These findings suggest that the novel inhibitory peptides encapsulated into PEGylated PLGA NPs are delivered effectively to interact and deactivate Ran. This novel Ran-targeting peptide construct shows significant potential for therapy of breast cancer and other cancers mediated by Ran overexpression.


Cells ◽  
2020 ◽  
Vol 9 (5) ◽  
pp. 1098 ◽  
Author(s):  
Yinhsuan Michely Chen ◽  
Shu Qi ◽  
Stephanie Perrino ◽  
Masakazu Hashimoto ◽  
Pnina Brodt

The insulin-like growth factor (IGF)-axis was implicated in cancer progression and identified as a clinically important therapeutic target. Several IGF-I receptor (IGF-IR) targeting drugs including humanized monoclonal antibodies have advanced to phase II/III clinical trials, but to date, have not progressed to clinical use, due, at least in part, to interference with insulin receptor signaling and compensatory signaling by the insulin receptor (IR) isoform A that can bind IGF-II and initiate mitogenic signaling. Here we briefly review the current state of IGF-targeting biologicals, discuss some factors that may be responsible for their poor performance in the clinic and outline the stepwise bioengineering and validation of an IGF-Trap—a novel anti-cancer therapeutic that could bypass these limitations. The IGF-Trap is a heterotetramer, consisting of the entire extracellular domain of the IGF-IR fused to the Fc portion of human IgG1. It binds human IGF-I and IGF-II with a three-log higher affinity than insulin and could inhibit IGF-IR driven cellular functions such as survival, proliferation and invasion in multiple carcinoma cell models in vitro. In vivo, the IGF-Trap has favorable pharmacokinetic properties and could markedly reduce metastatic outgrowth of colon and lung carcinoma cells in the liver, outperforming IGF-IR and ligand-binding monoclonal antibodies. Moreover, IGF-Trap dose-response profiles correlate with their bio-availability profiles, as measured by the IGF kinase receptor-activation (KIRA) assay, providing a novel, surrogate biomarker for drug efficacy. Our studies identify the IGF-Trap as a potent, safe, anti-cancer therapeutic that could overcome some of the obstacles encountered by IGF-targeting biologicals that have already been evaluated in clinical settings.


PLoS ONE ◽  
2021 ◽  
Vol 16 (4) ◽  
pp. e0250175
Author(s):  
Daniel F. Lusche ◽  
Deborah J. Wessels ◽  
Ryan J. Reis ◽  
Cristopher C. Forrest ◽  
Alexis R. Thumann ◽  
...  

CD44 is a transmembrane glycoprotein that binds to hyaluronic acid, plays roles in a number of cellular processes and is expressed in a variety of cell types. It is up-regulated in stem cells and cancer. Anti-CD44 monoclonal antibodies affect cell motility and aggregation, and repress tumorigenesis and metastasis. Here we describe four new anti-CD44 monoclonal antibodies originating from B cells of a mouse injected with a plasmid expressing CD44 isoform 12. The four monoclonal antibodies bind to the terminal, extracellular, conserved domain of CD44 isoforms. Based on differences in western blot patterns of cancer cell lysates, the four anti-CD44 mAbs separated into three distinct categories that include P4G9, P3D2, and P3A7, and P3G4. Spot assay analysis with peptides generated inEscherichia colisupport the conclusion that the monoclonal antibodies recognize unglycosylated sequences in the N-terminal conserved region between amino acid 21–220, and analyses with a peptide generated in human embryonic kidney 293 cells, demonstrate that these monoclonal antibodies bind to these peptides only after deglycosylation. Western blots with lysates from three cancer cell lines demonstrate that several CD44 isoforms are unglycosylated in the anti-CD44 target regions. The potential utility of the monoclonal antibodies in blocking tumorigenesis was tested by co-injection of cells of the breast cancer-derived tumorigenic cell line MDA-MB-231 with the anti-CD44 monoclonal antibody P3D2 into the mammary fat pads of mice. All five control mice injected with MDA-MB-231 cells plus anti-IgG formed palpable tumors, while only one of the six test mice injected with MDA-MB-231 cells plus P3D2 formed a tiny tumor, while the remaining five were tumor-free, indicating that the four anti-CD44 mAbs may be useful therapeutically.


Blood ◽  
2014 ◽  
Vol 124 (21) ◽  
pp. 2095-2095
Author(s):  
Katja Klausz ◽  
Renate Burger ◽  
Christian Kellner ◽  
Matthias Peipp ◽  
Martin Gramatzki

Abstract Introduction: Despite novel agents in multiple myeloma (MM) a substantial number of patients is still in need of better disease control. Monoclonal antibodies provide therapeutic options in other tumor entities but in MM no antibody has been approved yet. Two antibodies currently evaluated namely Daratumumab (CD38) and Elotuzumab (CD319), are ahead and achieved phase 3 clinical trials, but other antigens on myeloma cells could also be promising targets. Here, a cell-based phage display screening strategy is presented that identified a novel intercellular adhesion molecule-1 (ICAM-1)/CD54 antibody suitable for myeloma immunotherapy. Methods: Synthetic human single-chain fragment variable (scFv) phage display libraries were pre-absorbed with granulocytes and T lymphocytes of healthy individuals and subsequently panned with plasma cell lines INA-6 and JK-6L. Phage binding characteristics were evaluated by cellular ELISA and flow cytometry. The coding sequence of the leading candidate MSH-TP15 was used to generate scFv-Fc fusion proteins and fully human IgG1 antibodies with wild type or modified Fc domains for functional in vitro and in vivo testing. Results: Panning of human phage display libraries with a newly established subtractive cellular screening approach resulted in phages with preferential binding to MM cells. Based on its reactivity with MM cell lines and patient-derived CD138+ malignant plasma cells from bone marrow, pleural effusion and peripheral blood, the leading candidate MSH-TP15 was selected. Notably, MSH-TP15 showed no or only marginal binding to B and T lymphocytes, NK cells, monocytes and granulocytes of healthy individuals and MM patients. Recent studies identified ICAM-1/CD54 as the antigen recognized by MSH-TP15. The antibody alone was not capable to significantly inhibit growth of plasma cell lines in vitro, however induced antibody-dependent cell-mediated cytotoxicity (ADCC), an important killing mechanism of many therapeutic antibodies. An Fc-engineered antibody variant of MSH-TP15 triggered dose-dependent ADCC against INA-6, L363, RPMI-8226, U266 and MM1.S plasma cell lines and freshly isolated tumor cells using blood mononuclear cells and NK cells of healthy donors as effector cells. In contrast, complement-dependent cytotoxicity was not induced. Importantly, in vivo studies revealed that MSH-TP15 completely prevented tumor engraftment in the INA-6 myeloma xenograft model. Conclusions: The cell-based screening of phage display libraries led to the identification of a novel ICAM-1/CD54 antibody that is effective in antibody-mediated cellular cytotoxicity of MM cells in vitro and completely prevented myeloma tumor engraftment in vivo. The relevant mechanisms of action of MSH-TP15 will be defined with different antibody variants and in vivo models to further evaluate its potential for an antibody-based treatment approach of MM. Disclosures No relevant conflicts of interest to declare.


Blood ◽  
2020 ◽  
Vol 136 (Supplement 1) ◽  
pp. 15-16
Author(s):  
Amy Chen ◽  
Ons Harrabi ◽  
Abraham P Fong ◽  
Katherine L. Ruffner ◽  
Alison J. Forgie ◽  
...  

Acute myeloid leukemia (AML) is an aggressive hematologic malignancy with most patients relapsing even after initial therapies. Despite recent advances in treatment, the development of efficacious novel treatments remains an unmet need. CD47 is a myeloid checkpoint upregulated by tumor cells to evade the host immune response, and its blockade enhances anti-tumor immunity (Weiskopf, 2017). Recently, pre-clinical and clinical studies that explored the use of CD47 targeting agents in combination with azacitidine, a hypomethylating chemotherapeutic, demonstrated robust anti-cancer activity (Feng, ASH 2018 and Sallman, ASH 2019). ALX148 is an engineered fusion protein comprised of a high affinity CD47 blocker linked to an inactive human immunoglobulin Fc region. In preclinical studies, ALX148 bridges innate and adaptive immunity by promoting macrophage phagocytosis, dendritic cell activation and a shift of tumor-associated macrophages towards an inflammatory phenotype, leading to increased anti-tumor activity when combined with various anti-cancer therapeutics (Kauder, 2018). ALX148 has previously been shown to be well tolerated in patients with both solid tumor and hematological malignancies with encouraging anti-tumor responses reported in combination with anti-cancer therapeutics (EHA 2020, #EP1247 and ASCO 2020, #3056). Recently, the combination of azacitidine with venetoclax, a BCL2 inhibitor, has shown increased efficacy compared to azacitidine alone in patients with AML (EHA 2020, #LB2601). We observed in vitro treatment with azacitidine or venetoclax increased the cell surface expression of both CD47 and calreticulin, a pro-phagocytic marker, in multiple AML cell lines. We thereby hypothesize that combining ALX148 with either azacitidine or venetoclax would enhance the therapeutic efficacy against AML and report our preclinical findings here. In vitro treatment with ALX148 led to enhanced phagocytic engulfment by human monocyte-derived macrophages across multiple AML cell lines treated with azacitidine or venetoclax, including those harboring TP53 and FLT3 mutations, compared to either treatment alone. Our in vitro findings correlated with enhanced in vivo antileukemic activity in several murine AML xenograft models. Mice were inoculated via tail vein or implanted subcutaneously with AML cells, and when tumors reached exponential growth, mice were randomized to receive the following: vehicle control, azacitidine, venetoclax, ALX148 alone or ALX148 in combination. Cohorts receiving ALX148 combination therapies demonstrated significantly greater inhibition of tumor progression with evidence of tumor eradication, leading to markedly enhanced survival over any single agent therapy. Together, these in vitro and in vivo results provide rationale that ALX148 combinations may benefit AML and MDS patients. Clinical trials with ALX148 in patients with MDS (NCT04417517) and AML are currently planned. Disclosures Chen: ALX Oncology: Consultancy, Current equity holder in publicly-traded company, Ended employment in the past 24 months; Tallac Therapeutics: Current Employment, Current equity holder in private company. Harrabi:ALX Oncology Inc: Consultancy, Current equity holder in publicly-traded company, Ended employment in the past 24 months; Tallac Therapeutics: Current Employment, Current equity holder in private company. Fong:ALX Oncology Inc: Current Employment, Current equity holder in publicly-traded company. Ruffner:ALX Oncology Inc: Current Employment, Current equity holder in publicly-traded company. Forgie:ALX Oncology Inc.: Current Employment, Current equity holder in publicly-traded company; Pfizer Inc.: Ended employment in the past 24 months. Sim:ALX Oncology Inc: Consultancy, Current equity holder in publicly-traded company, Ended employment in the past 24 months; Tallac Therapeutics: Current Employment, Current equity holder in private company. Randolph:ALX Oncology Inc.: Current Employment, Current equity holder in publicly-traded company. Wan:Tallac Therapeutics: Current Employment, Current equity holder in private company; ALX Oncology Inc: Consultancy, Current equity holder in publicly-traded company, Ended employment in the past 24 months. Pons:ALX Oncology Inc.: Current Employment, Current equity holder in publicly-traded company. Kuo:ALX Oncology Inc: Consultancy, Current equity holder in publicly-traded company, Ended employment in the past 24 months; Tallac Therapeutics: Current Employment, Current equity holder in private company.


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