scholarly journals Casting a Wider Net: Differentiating between Inner Nuclear Envelope and Outer Nuclear Envelope Transmembrane Proteins

2019 ◽  
Vol 20 (21) ◽  
pp. 5248 ◽  
Author(s):  
Mark Tingey ◽  
Krishna C. Mudumbi ◽  
Eric C. Schirmer ◽  
Weidong Yang
Keyword(s):  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Nuclear Membrane ◽  
Nuclear Organization ◽  
Transmembrane Proteins ◽  
Eukaryotic Cells ◽  
Genome Architecture ◽  
Double Membrane ◽  
Vital Functions ◽  
Nuclear Stability

The nuclear envelope (NE) surrounds the nucleus with a double membrane in eukaryotic cells. The double membranes are embedded with proteins that are synthesized on the endoplasmic reticulum and often destined specifically for either the outer nuclear membrane (ONM) or the inner nuclear membrane (INM). These nuclear envelope transmembrane proteins (NETs) play important roles in cellular function and participate in transcription, epigenetics, splicing, DNA replication, genome architecture, nuclear structure, nuclear stability, nuclear organization, and nuclear positioning. These vital functions are dependent upon both the correct localization and relative concentrations of NETs on the appropriate membrane of the NE. It is, therefore, important to understand the distribution and abundance of NETs on the NE. This review will evaluate the current tools and methodologies available to address this important topic.

scholarly journals Endoplasmic reticulum-to-Golgi transitions upon herpes virus infection

F1000Research ◽  
2018 ◽  
Vol 6 ◽  
pp. 1804 ◽  
Author(s):  
Peter Wild ◽  
Andres Kaech ◽  
Elisabeth M. Schraner ◽  
Ladina Walser ◽  
Mathias Ackermann
Keyword(s):  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Golgi Complex ◽  
Nuclear Membrane ◽  
Progeny Virus ◽  
Cytoplasmic Matrix ◽  
Outer Nuclear Membrane ◽  
Nuclear Membranes ◽  
Perinuclear Space ◽  
Hsv 1

Background: Herpesvirus capsids are assembled in the nucleus, translocated to the perinuclear space by budding, acquiring tegument and envelope, or released to the cytoplasm via impaired nuclear envelope. One model proposes that envelopment, “de-envelopment” and “re-envelopment” is essential for production of infectious virus. Glycoproteins gB/gH were reported to be essential for de-envelopment, by fusion of the “primary” envelope with the outer nuclear membrane. Yet, a high proportion of enveloped virions generated from genomes with deleted gB/gH were found in the cytoplasm and extracellular space, suggesting the existence of alternative exit routes.Methods: We investigated the relatedness between the nuclear envelope and membranes of the endoplasmic reticulum and Golgi complex, in cells infected with either herpes simplex virus 1 (HSV-1) or a Us3 deletion mutant thereof, or with bovine herpesvirus 1 (BoHV-1) by transmission and scanning electron microscopy, employing freezing technique protocols.Results:  The Golgi complex is a compact entity in a juxtanuclear position covered by a membrane on thecisface. Golgi membranes merge with membranes of the endoplasmic reticulum forming an entity with the perinuclear space. All compartments contained enveloped virions. After treatment with brefeldin A, HSV-1 virions aggregated in the perinuclear space and endoplasmic reticulum, while infectious progeny virus was still produced.Conclusions: The data suggest that virions derived by budding at nuclear membranes are intraluminally transported from the perinuclear space via Golgi -endoplasmic reticulum transitions into Golgi cisternae for packaging. Virions derived by budding at nuclear membranes are infective like Us3 deletion mutants, which  accumulate in the perinuclear space. Therefore, i) de-envelopment followed by re-envelopment is not essential for production of infective progeny virus, ii) the process taking place at the outer nuclear membrane is budding not fusion, and iii) naked capsids gain access to the cytoplasmic matrix via impaired nuclear envelope as reported earlier.

The nuclear envelope

2019 ◽  
pp. 140-146
Author(s):  
John C. Lucchesi
Keyword(s):  
Nuclear Envelope ◽  
Lipid Bilayers ◽  
Nuclear Membrane ◽  
Substantial Portion ◽  
Inner Membrane ◽  
Double Membrane ◽  
Stochastic Nature ◽  
Inner Surface ◽  
Associated Proteins ◽  
Or Gene

The nuclear envelope is a double membrane sheath made up of two lipid bilayers—an outer and an inner membrane. The inner surface of the inner membrane is associated with a meshwork of filaments made up of lamins and of lamin-associated proteins that constitute the lamina. A substantial portion of the genome contacts the lamina through lamina-associated domains (LADs). LADs usually position silent or gene-poor regions of the genome near the lamina and nuclear membrane. The position of some LADs is different in some cells of the same tissue, reflecting the stochastic nature of gene activity; it can also change during differentiation, allowing the necessary activation of particular genes. Contact of transcription units with nuclear pores can result in activation or, sometimes, repression. Some of the proteins that contribute to the structure of the pores can activate transcription by associating with genes or with super-enhancers away from the nuclear membrane.

scholarly journals BAF facilitates interphase nuclear membrane repair through recruitment of nuclear transmembrane proteins

2020 ◽  
Vol 31 (15) ◽  
pp. 1551-1560 ◽  
Author(s):  
Alexandra M. Young ◽  
Amanda L. Gunn ◽  
Emily M. Hatch
Keyword(s):  
Nuclear Envelope ◽  
Nuclear Membrane ◽  
Transmembrane Proteins ◽  
Membrane Repair ◽  
Membrane Rupture ◽  
Protein Barrier

Nuclear membrane rupture occurs during interphase in a variety of cell contexts, but how the membrane repairs remains poorly understood. Here we show that the nuclear envelope (NE) protein barrier-to-autointegration factor facilitates membrane repair by recruiting transmembrane NE proteins to rupture sites.

scholarly journals Induction of a Massive Endoplasmic Reticulum and Perinuclear Space Expansion by Expression of Lamin B Receptor Mutants and the Related Sterol Reductases TM7SF2 and DHCR7

2010 ◽  
Vol 21 (2) ◽  
pp. 354-368 ◽  
Author(s):  
Monika Zwerger ◽  
Thorsten Kolb ◽  
Karsten Richter ◽  
Iakowos Karakesisoglou ◽  
Harald Herrmann
Keyword(s):  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Cell Lines ◽  
Nuclear Membrane ◽  
Cultured Cells ◽  
Membrane Separation ◽  
Reductase Activity ◽  
Nuclear Pore ◽  
Lamin B ◽  
Lamin B Receptor

Lamin B receptor (LBR) is an inner nuclear membrane protein involved in tethering the nuclear lamina and the underlying chromatin to the nuclear envelope. In addition, LBR exhibits sterol reductase activity. Mutations in the LBR gene cause two different human diseases: Pelger-Huët anomaly and Greenberg skeletal dysplasia, a severe chrondrodystrophy causing embryonic death. Our study aimed at investigating the effect of five LBR disease mutants on human cultured cells. Three of the tested LBR mutants caused a massive compaction of chromatin coincidental with the formation of a large nucleus-associated vacuole (NAV) in several human cultured cell lines. Live cell imaging and electron microscopy revealed that this structure was generated by the separation of the inner and outer nuclear membrane. During NAV formation, nuclear pore complexes and components of the linker of nucleoskeleton and cytoskeleton complex were lost in areas of membrane separation. Concomitantly, a large number of smaller vacuoles formed throughout the cytoplasm. Notably, forced expression of the two structurally related sterol reductases transmembrane 7 superfamily member 2 and 7-dehydrocholesterol reductase caused, even in their wild-type form, a comparable phenotype in susceptible cell lines. Hence, LBR mutant variants and sterol reductases can severely interfere with the regular organization of the nuclear envelope and the endoplasmic reticulum.

scholarly journals Yeast Nuclear Envelope Subdomains with Distinct Abilities to Resist Membrane Expansion

2006 ◽  
Vol 17 (4) ◽  
pp. 1768-1778 ◽  
Author(s):  
Joseph L. Campbell ◽  
Alexander Lorenz ◽  
Keren L. Witkin ◽  
Thomas Hays ◽  
Josef Loidl ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Nuclear Membrane ◽  
Budding Yeast ◽  
Phospholipid Biosynthesis ◽  
Yeast Saccharomyces Cerevisiae ◽  
Nuclear Compartment ◽  
Round Shape ◽  
Nuclear Protrusion

Little is known about what dictates the round shape of the yeast Saccharomyces cerevisiae nucleus. In spo7Δ mutants, the nucleus is misshapen, exhibiting a single protrusion. The Spo7 protein is part of a phosphatase complex that represses phospholipid biosynthesis. Here, we report that the nuclear protrusion of spo7Δ mutants colocalizes with the nucleolus, whereas the nuclear compartment containing the bulk of the DNA is unaffected. Using strains in which the nucleolus is not intimately associated with the nuclear envelope, we show that the single nuclear protrusion of spo7Δ mutants is not a result of nucleolar expansion, but rather a property of the nuclear membrane. We found that in spo7Δ mutants the peripheral endoplasmic reticulum (ER) membrane was also expanded. Because the nuclear membrane and the ER are contiguous, this finding indicates that in spo7Δ mutants all ER membranes, with the exception of the membrane surrounding the bulk of the DNA, undergo expansion. Our results suggest that the nuclear envelope has distinct domains that differ in their ability to resist membrane expansion in response to increased phospholipid biosynthesis. We further propose that in budding yeast there is a mechanism, or structure, that restricts nuclear membrane expansion around the bulk of the DNA.

scholarly journals Nuclear Envelope Proteins Modulating the Heterochromatin Formation and Functions in Fission Yeast

Cells ◽  
2020 ◽  
Vol 9 (8) ◽  
pp. 1908 ◽  
Author(s):  
Yasuhiro Hirano ◽  
Haruhiko Asakawa ◽  
Takeshi Sakuno ◽  
Tokuko Haraguchi ◽  
Yasushi Hiraoka
Keyword(s):  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Fission Yeast ◽  
Histone Deacetylase ◽  
Nuclear Pore Complex ◽  
Molecular Mechanisms ◽  
Nuclear Pore ◽  
Double Membrane ◽  
Heterochromatin Formation ◽  
Nuclear Membranes

The nuclear envelope (NE) consists of the inner and outer nuclear membranes (INM and ONM), and the nuclear pore complex (NPC), which penetrates the double membrane. ONM continues with the endoplasmic reticulum (ER). INM and NPC can interact with chromatin to regulate the genetic activities of the chromosome. Studies in the fission yeast Schizosaccharomyces pombe have contributed to understanding the molecular mechanisms underlying heterochromatin formation by the RNAi-mediated and histone deacetylase machineries. Recent studies have demonstrated that NE proteins modulate heterochromatin formation and functions through interactions with heterochromatic regions, including the pericentromeric and the sub-telomeric regions. In this review, we first introduce the molecular mechanisms underlying the heterochromatin formation and functions in fission yeast, and then summarize the NE proteins that play a role in anchoring heterochromatic regions and in modulating heterochromatin formation and functions, highlighting roles for a conserved INM protein, Lem2.

scholarly journals NUCLEAR MEMBRANES FROM MAMMALIAN LIVER

1970 ◽  
Vol 46 (2) ◽  
pp. 379-395 ◽  
Author(s):  
Werner W. Franke ◽  
Barbara Deumling ◽  
Baerbel Ermen ◽  
Ernst-Dieter Jarasch ◽  
Hans Kleinig
Keyword(s):  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Nuclear Membrane ◽  
Cytochrome B5 ◽  
Buoyant Density ◽  
Nuclear Pore ◽  
Nuclear Membranes ◽  
Dna And Rna ◽  
Mammalian Liver ◽  
Order Of Magnitude

Nuclear membranes were isolated from rat and pig liver by sonication of highly purified nuclear fractions and subsequent removal of adhering nucleoproteins in a high salt medium. The fractions were examined in the electron microscope by both negative staining and thin sectioning techniques and were found to consist of nuclear envelope fragments of widely varying sizes. Nuclear pore complex constituents still could frequently be recognized. The chemical composition of the nuclear membrane fractions was determined and compared with those of microsomal fractions prepared in parallel. For total nuclei as well as for nuclear membranes and microsomes, various enzyme activities were studied. The results indicate that a similarity exists between both fractions of cytomembranes, nuclear envelope, and endoplasmic reticulum, with respect to their RNA:protein ratio and their content of polar and nonpolar lipids. Both membranous fractions had many proteins in common including some membrane-bound enzymes. Activities in Mg-ATPase and the two examined cytochrome reductases were of the same order of magnitude. The content of cytochrome b5 as well as of P-450 was markedly lower in the nuclear membranes. The nuclear membranes were found to have a higher buoyant density and to be richer in protein. The glucose-6-phosphatase and Na-K-ATPase activities in the nuclear membrane fraction were very low. In the gel electrophoresis, in addition to many common protein bands, some characteristic ones for either microsomal or nuclear membranous material were detected. Significant small amounts of DNA and RNA were found to remain closely associated with the nuclear envelope fragments. Our findings indicate that nuclear and endoplasmic reticulum membranes which are known to be in morphological continuity have, besides a far-reaching similarity, some characteristic differences.

Cell and nucleomorph division in the alga Cryptomonas

1982 ◽  
Vol 60 (11) ◽  
pp. 2440-2452 ◽  
Author(s):  
Lisa McKerracher ◽  
Sarah P. Gibbs
Keyword(s):  
Endoplasmic Reticulum ◽  
Nuclear Envelope ◽  
Outer Membrane ◽  
Basal Body ◽  
Nuclear Division ◽  
Residual Nucleus ◽  
Inner Membrane ◽  
Double Membrane ◽  
Ultrastructural Investigation ◽  
Periplastidal Compartment

An ultrastructural investigation of cell and nuclear division in Cryptomonas sp. (θ) was made with particular emphasis on the mode of division of the chloroplast and nucleomorph. Mitosis is similar to that in other cryptomonads except that the nuclear envelope remains mostly intact. Division of the single chloroplast occurs in preprophase by constriction through the dorsal bridge. Frequently there is a lag between the division of the chloroplast and the division of its envelope of chloroplast endoplasmic reticulum. In addition, the inner membrane of the chloroplast endoplasmic reticulum may infold well in advance of the outer membrane.The nucleomorph is a unique double membrane limited organelle which is found in the periplastidal compartment of cryptomonads. It divides in preprophase following basal body replication but before division of the chloroplast and its chloroplast endoplasmic reticulum is complete. The inner membrane of the nucleomorph envelope invaginates first forming a double membraned baffle. The outer membrane invaginates next and completes division. Microtubules are not involved in nucleomorph division. None were observed and colchicine, which inhibited nuclear division, did not inhibit nucleomorph division. The theory that the nucleomorph is the residual nucleus of a former eukaryotic endosymbiont is reevaluated in light of these new observations.

scholarly journals Unfolded Protein Response of the Endoplasmic Reticulum in Tumor Progression and Immunogenicity

2017 ◽  
Vol 2017 ◽  
pp. 1-18 ◽  
Author(s):  
Yoon Seon Yoo ◽  
Hye Gyeong Han ◽  
Young Joo Jeon
Keyword(s):  
Quality Control ◽  
Endoplasmic Reticulum ◽  
Tumor Progression ◽  
Unfolded Protein Response ◽  
Therapeutic Intervention ◽  
Transmembrane Proteins ◽  
Eukaryotic Cells ◽  
Protein Homeostasis ◽  
Unfolded Protein ◽  
Protein Response

The endoplasmic reticulum (ER) is a pivotal regulator of folding, quality control, trafficking, and targeting of secreted and transmembrane proteins, and accordingly, eukaryotic cells have evolved specialized machinery to ensure that the ER enables these proteins to acquire adequate folding and maturation in the presence of intrinsic and extrinsic insults. This adaptive capacity of the ER to intrinsic and extrinsic perturbations is important for maintaining protein homeostasis, which is termed proteostasis. Failure in adaptation to these perturbations leads to accumulation of misfolded or unassembled proteins in the ER, which is termed ER stress, resulting in the activation of unfolded protein response (UPR) of the ER and the execution of ER-associated degradation (ERAD) to restore homeostasis. Furthermore, both of the two axes play key roles in the control of tumor progression, inflammation, immunity, and aging. Therefore, understanding UPR of the ER and subsequent ERAD will provide new insights into the pathogenesis of many human diseases and contribute to therapeutic intervention in these diseases.

scholarly journals The Leukocyte Nuclear Envelope Proteome Varies with Cell Activation and Contains Novel Transmembrane Proteins That Affect Genome Architecture

2010 ◽  
Vol 9 (12) ◽  
pp. 2571-2585 ◽  
Author(s):  
Nadia Korfali ◽  
Gavin S. Wilkie ◽  
Selene K. Swanson ◽  
Vlastimil Srsen ◽  
Dzmitry G. Batrakou ◽  
...  
Keyword(s):  
Nuclear Envelope ◽  
Cell Activation ◽  
Transmembrane Proteins ◽  
Genome Architecture
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