scholarly journals Drought Response in Rice: The miRNA Story

2019 ◽  
Vol 20 (15) ◽  
pp. 3766 ◽  
Author(s):  
Kalaivani Nadarajah ◽  
Ilakiya Sharanee Kumar
Keyword(s):  
Drought Stress ◽  
Stress Responses ◽  
Defense Mechanisms ◽  
Regulatory Networks ◽  
Aquatic Plant ◽  
Target Genes ◽  
Crop Improvement ◽  
In Planta ◽  
Physiological Processes ◽  
And Control

As a semi-aquatic plant, rice requires water for proper growth, development, and orientation of physiological processes. Stress is induced at the cellular and molecular level when rice is exposed to drought or periods of low water availability. Plants have existing defense mechanisms in planta that respond to stress. In this review we examine the role played by miRNAs in the regulation and control of drought stress in rice through a summary of molecular studies conducted on miRNAs with emphasis on their contribution to drought regulatory networks in comparison to other plant systems. The interaction between miRNAs, target genes, transcription factors and their respective roles in drought-induced stresses is elaborated. The cross talk involved in controlling drought stress responses through the up and down regulation of targets encoding regulatory and functional proteins is highlighted. The information contained herein can further be explored to identify targets for crop improvement in the future.

The expanding roles of APETALA2/Ethylene Responsive Factors and their potential applications in crop improvement

2019 ◽  
Vol 18 (4) ◽  
pp. 240-254 ◽  
Author(s):  
Rajat Srivastava ◽  
Rahul Kumar
Keyword(s):  
Stress Responses ◽  
Regulatory Networks ◽  
Target Genes ◽  
Agronomic Traits ◽  
Crop Improvement ◽  
Plant Stress ◽  
Structural Features ◽  
Plant Responses ◽  
Ethylene Response Factor ◽  
Improvement Programs

AbstractUnderstanding the molecular basis of the gene-regulatory networks underlying agronomic traits or plant responses to abiotic/biotic stresses is very important for crop improvement. In this context, transcription factors, which either singularly or in conjugation directly control the expression of many target genes, are suitable candidates for improving agronomic traits via genetic engineering. In this regard, members of one of the largest class of plant-specific APETALA2/Ethylene Response Factor (AP2/ERF) superfamily, which is implicated in various aspects of development and plant stress adaptation responses, are considered high-value targets for crop improvement. Besides their long-known regulatory roles in mediating plant responses to abiotic stresses such as drought and submergence, the novel roles of AP2/ERFs during fruit ripening or secondary metabolites production have also recently emerged. The astounding functional plasticity of AP2/ERF members is considered to be achieved by their interplay with other regulatory networks and signalling pathways. In this review, we have integrated the recently accumulated evidence from functional genomics studies and described their newly emerged functions in plants. The key structural features of AP2/ERF proteins and the modes of their action are briefly summarized. The importance of AP2/ERFs in plant development and stress responses and a summary of the event of their successful applications in crop improvement programs are also provided. Altogether, we envisage that the synthesized information presented in this review will be useful to design effective strategies for improving agronomic traits in crop plants.

scholarly journals Spermine: Its Emerging Role in Regulating Drought Stress Responses in Plants

Cells ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 261
Author(s):  
Md. Mahadi Hasan ◽  
Milan Skalicky ◽  
Mohammad Shah Jahan ◽  
Md. Nazmul Hossain ◽  
Zunaira Anwar ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Stress Responses ◽  
Abiotic Stresses ◽  
Defense Mechanisms ◽  
Antioxidant Defense ◽  
Severe Drought ◽  
New Information ◽  
Effects Of Drought

In recent years, research on spermine (Spm) has turned up a lot of new information about this essential polyamine, especially as it is able to counteract damage from abiotic stresses. Spm has been shown to protect plants from a variety of environmental insults, but whether it can prevent the adverse effects of drought has not yet been reported. Drought stress increases endogenous Spm in plants and exogenous application of Spm improves the plants’ ability to tolerate drought stress. Spm’s role in enhancing antioxidant defense mechanisms, glyoxalase systems, methylglyoxal (MG) detoxification, and creating tolerance for drought-induced oxidative stress is well documented in plants. However, the influences of enzyme activity and osmoregulation on Spm biosynthesis and metabolism are variable. Spm interacts with other molecules like nitric oxide (NO) and phytohormones such as abscisic acid, salicylic acid, brassinosteroids, and ethylene, to coordinate the reactions necessary for developing drought tolerance. This review focuses on the role of Spm in plants under severe drought stress. We have proposed models to explain how Spm interacts with existing defense mechanisms in plants to improve drought tolerance.

scholarly journals Evaluation of Effect of Brassinolide in Brassica juncea Leaves under Drought Stress in Field Conditions

Horticulturae ◽  
2021 ◽  
Vol 7 (11) ◽  
pp. 514
Author(s):  
Naveen Naveen ◽  
Nisha Kumari ◽  
Ram Avtar ◽  
Minakshi Jattan ◽  
Sushil Ahlawat ◽  
...  
Keyword(s):  
Drought Stress ◽  
Brassica Juncea ◽  
Antioxidant System ◽  
Defense Mechanisms ◽  
Crop Improvement ◽  
Stress Conditions ◽  
Flower Initiation ◽  
Enzymatic Antioxidants ◽  
Stress Indicators ◽  
Enhanced Production

Drought stress is considered to be a major factor responsible for reduced agricultural productivity, because it is often linked to other major abiotic stresses, such as salinity and heat stress. Understanding drought-tolerance mechanisms is important for crop improvement. Moreover, under drought conditions, it is possible that growth regulators are able to protect the plants. Brassinosteroids not only play a regulatory role in plant growth, but also organize defense mechanisms against various tresses. This study aimed to evaluate the effect of brassinolide on physio-biochemical amendment in two contrasting cultivars (drought-tolerant RH 725, and drought-sensitive RH 749) of Brassica juncea under drought stress. Two foliar sprayings with brassinolide (10 and 20 mg/L) were carried out in both cultivars (RH 725 and RH 749) at two stages—i.e., flower initiation, and 50% flowering—under stress conditions. The results clearly revealed that the activities of antioxidative enzymes and non-enzymatic antioxidants (carotenoids, ascorbic acid, and proline) increased significantly in RH 725 at 50% flowering, whereas 20 mg/L of brassinolide showed the most promising response. The different oxidative stress indicators (i.e., hydrogen peroxide, malondialdehyde, and electrolyte leakage) decreased to a significant extent at 20 mg/L of brassinolide spray in RH 725 at 50% flowering. This study indicates that brassinolide intensifies the physio-biochemical attributes by improving the antioxidant system and photosynthetic efficiency in RH 725 at 50% flowering. It is assumed that enhanced production of proline, improvement of the antioxidant system, and reduction in the amount of stress indicators impart strength to the plants to combat the stress conditions.

scholarly journals Metabolomics Response to Drought Stress in Morus alba L. variety Yu-711

2021 ◽  
Author(s):  
Michael Ackah ◽  
Yisu Shi ◽  
Mengmeng Wu ◽  
Lei Wang ◽  
Guo Peng ◽  
...  
Keyword(s):  
Drought Stress ◽  
Defense Mechanisms ◽  
Physiological Status ◽  
Total Lipids ◽  
Metabolomic Analysis ◽  
Liquid Chromatography Mass Spectrometry ◽  
And Control ◽  
Fatty Acyls ◽  
Mulberry Plant ◽  
Metabolomic Approach

Mulberry is an economically significant crop for the sericulture industry worldwide. Stresses such as drought exposure have a significant influence on plant survival. Metabolome directly reflects plant physiological status; thus, a way to assess this impact is to perform a global metabolomic analysis. This study investigated the effect of drought stress on mulberry Yu-711 metabolic balance using a liquid chromatography-mass spectrometry (LC-MS) based on an untargeted metabolomic approach. For this objective, Yu-711 leaves were subjected to two weeks of drought stress treatment and control without drought stress. Multivariate and univariate statistical analyses highlighted numerous differentially-accumulated metabolic elements as a function of time and treatment. Drought stress led to a more differentiated metabolites response than the control. We found that the levels of total lipids and galactolipids, and phospholipids (PC, PA, PE) were significantly altered, producing 48% of the total differentially expressed metabolites. Fatty acyls were the most abundant lipids expressed and decreased considerably by 73.6%. Prenol lipids class of lipids increased in drought leaves. Other classes of metabolites, including polyphenols( flavonoids and cinnamic acid), organic acid (amino acids), carbohydrates, benzenoids, and organoheterocyclic, all had a dynamic trend in response to the drought stress. However, their levels under drought stress generally decreased significantly compared to the control. These results provide an overview of the metabolic profile of the mulberry plant through differentially-accumulated compounds and provide a better understanding of global plant metabolic changes in defense mechanisms.

scholarly journals Amenability of Maruca vitrata (Lepidoptera: Crambidae) to gene silencing through exogenous administration and host-delivered dsRNA in pigeonpea (Cajanus cajan L.)

2021 ◽  
Author(s):  
Madhurima Chatterjee ◽  
Jyoti Yadav ◽  
Maniraj Rathinam ◽  
Kesiraju Karthik ◽  
Gopal Chowdhary ◽  
...  
Keyword(s):  
Gene Silencing ◽  
Target Genes ◽  
Insect Pests ◽  
Crop Improvement ◽  
Maruca Vitrata ◽  
Economic Losses ◽  
In Planta ◽  
Biotic Stresses ◽  
Pod Borer ◽  
Plant Level

Abstract Insect pests are one of the major biotic stresses limiting yield in commercially important food crops. The lepidopteran polyphagous spotted pod borer, Maruca vitrata causes significant economic losses in legumes including pigeonpea. RNAi-based gene silencing has emerged as one of the potential biotechnological tools for crop improvement. We report in this paper, RNAi in M. vitrata through exogenous administration of dsRNA encoding three functionally important genes, Alpha-amylase (α-amylase), Chymotrypsin-like serine protease (CTLP) and Tropomyosin (TPM) into the larval haemolymph and their host-delivered RNAi in pigeonpea. Significant decline in the expression of selected genes supported by over-expression of DICER and generation of siRNA indicated the occurrence of RNAi in the dsRNA-injected larvae. Additionally, the onset of RNAi in the herbivore was demonstrated in pigeonpea, one of the prominent hosts, by host-delivered RNAi. Transgenics in pigeonpea (cv. Pusa992), a highly recalcitrant crop, were developed through a shoot apical meristem-targeted in planta transformation strategy and evaluated. Plant level bioassays in transgenic events characterized and selected at molecular level showed mortality of M. vitrata larvae as well as reduced feeding when compared to wild type. Furthermore, molecular evidences for down regulation of target genes in the insects that fed on transgenics authenticated RNAi. Considering the variability of gene silencing in lepidopteran pests, this study provided corroborative proof for the possibility of gene silencing in M. vitrata through both the strategies.

scholarly journals Identification and characterization of circular RNAs regulating genes responsible for drought stress tolerance in chickpea and soybean

2020 ◽  
Vol 80 (01) ◽  
Author(s):  
Tanwy Dasmandal ◽  
A. R. Rao ◽  
Sarika Sahu
Keyword(s):  
Drought Stress ◽  
Stress Tolerance ◽  
Target Genes ◽  
Circular Rnas ◽  
Tolerance Mechanism ◽  
Drought Stress Tolerance ◽  
Response To Stress ◽  
Leguminous Crops ◽  
And Control

With the development of efficient algorithms, it has become feasible to unravel complex drought stress tolerance mechanism in leguminous crops. Even though the role of coding genes in drought stress tolerance mechanism is known to certain extent, the role of non-coding RNAs (ncRNAs) like circular RNAs (circRNAs) is unknown in leguminous crops like chickpea and soybean. Hence, a study has been taken up to predict the circular RNAs from the transcriptomes of chickpea and soybean and to study the circRNA-miRNA-mRNA interactions thereby identify the endogenous target mimics (eTMs). The in silico results revealed the presence of circRNAs in both the crop transcriptomes and their differential expressions under drought stress and control conditions. Besides, our findings showed three predicted eTMs where circRNAs acted as sponge for miRNAs that target genes like Glyma.18G065200.1 in soybean and XM_004517122, XM_027336693 in chickpea. The targeted genes are involved in various drought stress responsive mechanism through their activities in hormone signal transduction, response to stress, response to auxin and transcription factor activity.

scholarly journals Metabolomics Response to Drought Stress in Morus alba L. Variety Yu-711

Plants ◽  
2021 ◽  
Vol 10 (8) ◽  
pp. 1636
Author(s):  
Michael Ackah ◽  
Yisu Shi ◽  
Mengmeng Wu ◽  
Lei Wang ◽  
Peng Guo ◽  
...  
Keyword(s):  
Drought Stress ◽  
Defense Mechanisms ◽  
Physiological Condition ◽  
Total Lipids ◽  
Liquid Chromatography Mass Spectrometry ◽  
Stress Treatment ◽  
And Control ◽  
Fatty Acyls ◽  
Mulberry Plant ◽  
Metabolomic Approach

Mulberry is an economically significant crop for the sericulture industry worldwide. Stresses such as drought exposure have a significant influence on plant survival. Because metabolome directly reflects plant physiological condition, performing a global metabolomic analysis is one technique to examine this influence. Using a liquid chromatography-mass spectrometry (LC-MS) technique based on an untargeted metabolomic approach, the effect of drought stress on mulberry Yu-711 metabolic balance was examined. For this objective, Yu-711 leaves were subjected to two weeks of drought stress treatment and control without drought stress. Numerous differentially accumulated metabolic components in response to drought stress treatment were revealed by multivariate and univariate statistical analysis. Drought stress treatment (EG) revealed a more differentiated metabolite response than the control (CK). We found that the levels of total lipids, galactolipids, and phospholipids (PC, PA, PE) were significantly altered, producing 48% of the total differentially expressed metabolites. Fatty acyls components were the most abundant lipids expressed and decreased considerably by 73.6%. On the other hand, the prenol lipids class of lipids increased in drought leaves. Other classes of metabolites, including polyphenols (flavonoids and cinnamic acid), organic acid (amino acids), carbohydrates, benzenoids, and organoheterocyclic, had a dynamic trend in response to the drought stress. However, their levels under drought stress decreased significantly compared to the control. These findings give an overview for the understanding of global plant metabolic changes in defense mechanisms by revealing the mulberry plant metabolic profile through differentially accumulated compounds.

scholarly journals Shotgun Quantitative Proteomic Analysis of Proteins Responding to Drought Stress inBrassica rapaL. (Inbred Line “Chiifu”)

2016 ◽  
Vol 2016 ◽  
pp. 1-9 ◽  
Author(s):  
Soon-Wook Kwon ◽  
Mijeong Kim ◽  
Hijin Kim ◽  
Joohyun Lee
Keyword(s):  
Drought Stress ◽  
Inbred Line ◽  
Stress Responses ◽  
Target Genes ◽  
Antioxidant Activities ◽  
Expression Profiles ◽  
Enrichment Analysis ◽  
Differentially Expressed ◽  
Differentially Expressed Proteins ◽  
Family Protein

Through a comparative shotgun quantitative proteomics analysis inBrassica rapa(inbred line Chiifu), total of 3,009 nonredundant proteins were identified with a false discovery rate of 0.01 in 3-week-old plants subjected to dehydration treatment for 0, 24, and 48 h, plants subjected to drought stress. Ribulose-bisphosphate carboxylases, chlorophyll a/b-binding protein, and light harvesting complex in photosystem II were highly abundant proteins in the leaves and accounted for 9%, 2%, and 4%, respectively, of the total identified proteins. Comparative analysis of the treatments enabled detection of 440 differentially expressed proteins during dehydration. The results of clustering analysis, gene ontology (GO) enrichment analysis, and analysis of composite expression profiles of functional categories for the differentially expressed proteins indicated that drought stress reduced the levels of proteins associated with photosynthesis and increased the levels of proteins involved in catabolic processes and stress responses. We observed enhanced expression of many proteins involved in osmotic stress responses and proteins with antioxidant activities. Based on previously reported molecular functions, we propose that the following five differentially expressed proteins could provide target genes for engineering drought resistance in plants: annexin, phospholipase D delta, sDNA-binding transcriptional regulator, auxin-responsive GH3 family protein, and TRAF-like family protein.

scholarly journals Comparative Proteomic and Morpho-Physiological Analyses of Maize Wild-Type Vp16 and Mutant vp16 Germinating Seed Responses to PEG-Induced Drought Stress

2019 ◽  
Vol 20 (22) ◽  
pp. 5586 ◽  
Author(s):  
Songtao Liu ◽  
Tinashe Zenda ◽  
Anyi Dong ◽  
Yatong Yang ◽  
Xinyue Liu ◽  
...  
Keyword(s):  
Drought Stress ◽  
Drought Tolerance ◽  
Stress Responses ◽  
Molecular Mechanisms ◽  
Crop Improvement ◽  
Pentose Phosphate ◽  
Glutathione Metabolism ◽  
Abiotic Factor ◽  
Wild Type ◽  
Proteomics Analysis

Drought stress is a major abiotic factor compromising plant cell physiological and molecular events, consequently limiting crop growth and productivity. Maize (Zea mays L.) is among the most drought-susceptible food crops. Therefore, understanding the mechanisms underlying drought-stress responses remains critical for crop improvement. To decipher the molecular mechanisms underpinning maize drought tolerance, here, we used a comparative morpho-physiological and proteomics analysis approach to monitor the changes in germinating seeds of two incongruent (drought-sensitive wild-type Vp16 and drought-tolerant mutant vp16) lines exposed to polyethylene-glycol-induced drought stress for seven days. Our physiological analysis showed that the tolerant line mutant vp16 exhibited better osmotic stress endurance owing to its improved reactive oxygen species scavenging competency and robust osmotic adjustment as a result of greater cell water retention and enhanced cell membrane stability. Proteomics analysis identified a total of 1200 proteins to be differentially accumulated under drought stress. These identified proteins were mainly involved in carbohydrate and energy metabolism, histone H2A-mediated epigenetic regulation, protein synthesis, signal transduction, redox homeostasis and stress-response processes; with carbon metabolism, pentose phosphate and glutathione metabolism pathways being prominent under stress conditions. Interestingly, significant congruence (R2 = 81.5%) between protein and transcript levels was observed by qRT-PCR validation experiments. Finally, we propose a hypothetical model for maize germinating-seed drought tolerance based on our key findings identified herein. Overall, our study offers insights into the overall mechanisms underpinning drought-stress tolerance and provides essential leads into further functional validation of the identified drought-responsive proteins in maize.

scholarly journals Omics and plant responses to Botrytis cinerea

2018 ◽  
Author(s):  
Synan AbuQamar ◽  
Khaled Moustafa ◽  
Lam-Son Tran
Keyword(s):  
Botrytis Cinerea ◽  
Stress Responses ◽  
Defense Mechanisms ◽  
Agricultural Research ◽  
Genetic Manipulation ◽  
Pathogenic Fungus ◽  
Crop Improvement ◽  
Plant Stress ◽  
Plant Responses ◽  
Plant Interactions

Botrytis cinerea is a dangerous plant pathogenic fungus with wide host ranges. This aggressive pathogen uses multiple weapons to invade and cause serious damages on its host plants. The continuing efforts of how to solve the “puzzle” of the multigenic nature of B. cinerea’s pathogenesis and plant defense mechanisms against the disease caused by this mold, the integration of omic approaches, including genomics, transcriptomics, proteomics and metabolomics, along with functional analysis could be a potential solution. Omic studies will provide a foundation for development of genetic manipulation and breeding programs that will eventually lead to crop improvement and protection. In this mini-review, we will highlight the current progresses in research in plant stress responses to B. cinerea using high-throughput omic technologies. We also discuss the opportunities that omic technologies can provide to research on B. cinerea-plant interactions as an example showing the impacts of omics on agricultural research.

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