scholarly journals Development and Characterization of New Single Nucleotide Polymorphism Markers from Expressed Sequence Tags in Common Carp (Cyprinus carpio)

2012 ◽  
Vol 13 (6) ◽  
pp. 7343-7353 ◽  
Author(s):  
Chuankun Zhu ◽  
Lei Cheng ◽  
Jingou Tong ◽  
Xiaomu Yu
Keyword(s):  
Single Nucleotide Polymorphism ◽  
Common Carp ◽  
Cyprinus Carpio ◽  
Expressed Sequence Tags ◽  
Nucleotide Polymorphism ◽  
Single Nucleotide ◽  
Common Carp Cyprinus Carpio ◽  
Carp Cyprinus Carpio ◽  
Expressed Sequence

Survey of a cDNA library from the turkey (Meleagris gallopavo)

Genome ◽  
2005 ◽  
Vol 48 (1) ◽  
pp. 12-17 ◽  
Author(s):  
L D Chaves ◽  
J A Rowe ◽  
K M Reed
Keyword(s):  
Single Nucleotide Polymorphism ◽  
Expressed Sequence Tags ◽  
Expressed Sequence Tag ◽  
Meleagris Gallopavo ◽  
Whole Genome Sequence ◽  
Snp Discovery ◽  
Nucleotide Polymorphism ◽  
Single Nucleotide ◽  
Important Species ◽  
Expressed Sequence

Genome characterization and analysis is an imperative step in identifying and selectively breeding for improved traits of agriculturally important species. Expressed sequence tags (ESTs) represent a transcribed portion of the genome and are an effective way to identify genes within a species. Downstream applications of EST projects include DNA microarray construction and interspecies comparisons. In this study, 694 ESTs were sequenced and analyzed from a library derived from a 24-day-old turkey embryo. The 437 unique sequences identified were divided into 76 assembled contigs and 361 singletons. The majority of significant comparative matches occurred between the turkey sequences and sequences reported from the chicken. Whole genome sequence from the chicken was used to identify potential exon–intron boundaries for selected turkey clones and intron-amplifying primers were developed for sequence analysis and single nucleotide polymorphism (SNP) discovery. Identified SNPs were genotyped for linkage analysis on two turkey reference populations. This study significantly increases the number of EST sequences available for the turkey.Key words: turkey, cDNA, expressed sequence tag, single nucleotide polymorphism.

Characterization of Bacillus sp. NP5 and its Application as Probiotic for Common Carp (Cyprinus carpio)

2016 ◽  
Vol 11 (4) ◽  
pp. 101-111 ◽  
Author(s):  
Ricky Djauhari ◽  
Widanarni . ◽  
Sukenda . ◽  
Muhammad Agus Suprayudi ◽  
Muhammad Zairin Jr.
Keyword(s):  
Common Carp ◽  
Cyprinus Carpio ◽  
Bacillus Sp ◽  
Common Carp Cyprinus Carpio ◽  
Carp Cyprinus Carpio
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