scholarly journals Phylogenetic Position of Geosmithia spp. (Hypocreales) Living in Juniperus spp. Forests (Cupressaceae) with Bark Beetles of Phloeosinus spp. (Scolytinae) from the Northeast of Mexico

Forests ◽  
2020 ◽  
Vol 11 (11) ◽  
pp. 1142
Author(s):  
Hernández-García Juan Alfredo ◽  
Cuellar-Rodríguez Gerardo ◽  
Aguirre-Ojeda Nallely Guadalupe ◽  
Villa-Tanaca Lourdes ◽  
Hernández-Rodríguez César ◽  
...  
Keyword(s):  
New Species ◽  
Bark Beetle ◽  
Bark Beetles ◽  
Phylogenetic Analyses ◽  
Phylogenetic Position ◽  
Internal Transcribed Spacer Region ◽  
Potential Region ◽  
Nuevo Leon ◽  
The North ◽  
Nuevo León

Geosmithia members are mitosporic filamentous fungi commonly recorded and isolated from bark beetles of the Scolytinae subfamily and their respective host’s species. This genus includes 18 species formally described and 38 phylogenetic species recorded in several localities from Africa, Asia, Australia, Europe, and North and South America, where they exhibit frequent associations with phloeophagous and wood-boring bark beetles. Among phloephagous bark beetle species, specifically, in members of the genus Phloeosinus Chapuis, almost 10% of Geosmithia strains have been isolated. By its physiographic elements and high bark beetle and conifer species richness, Mexico is a potential region to host a high diversity of Geosmithia species and potential new species. In the present study, we systematically sampled and isolated, cultured, and molecularly identified members of the Geosmithia species associated with Phloeosinus spp. and their Juniperus spp. host trees at the north of Sierra Madre Oriental, at Nuevo Leon State, Mexico. Phylogenetic analyses based on 378 internal transcribed spacer region (ITS) sequences supported the presence of strains from Geosmithia langdonii-Geosmithia sp. 32 clade associated with Phloeosinus serratus vector and with Juniperus coahuilensis (JC) host, and the presence of strains from Geosmithia sp. 21-Geosmithia xerotolerans clade with Phloeosinusdeleoni and Juniperus flaccida (JF) in this geographical region. The genetic and morphological differences found in our strains with respect to those previously described in the species from both clades (Geosmithia langdonii-Geosmithia sp. 32 and Geosmithia sp. 21-G. xerotolerans) suggest that both Geosmithia lineages from Nuevo Leon correspond to two potential new species in the genus.

A new species of Cleistocybe (Agaricales, Basidiomycota) from the Tibetan Plateau, China

Phytotaxa ◽  
2018 ◽  
Vol 336 (3) ◽  
pp. 286 ◽  
Author(s):  
HONG-MEI WU ◽  
JIA-QI LUO ◽  
KE WANG ◽  
RUN-CHAO ZHANG ◽  
YI LI ◽  
...  
Keyword(s):  
New Species ◽  
Tibetan Plateau ◽  
Phylogenetic Analyses ◽  
Morphological Observation ◽  
Morphological Description ◽  
The Tibetan Plateau ◽  
Sequence Analyses ◽  
The North ◽  
Close Relationship ◽  
A New Species

During field expeditions to the Tibetan Plateau, a collection of an undescribed species with several basidiomes was found. Morphological observation and DNA sequence analyses of the collection revealed a close relationship with Cleistocybe vernalis, the type species of the genus Cleistocybe. Therefore, a new species is proposed for the fungus with full morphological description accompanied by phylogenetic analyses. The discovery of the species extends the reported distribution of the genus from the north of America and Europe to Asia.

Two new phyllocoptine species and new records of eriophyoid mites (Eriophyidae, Phyllocoptinae) from Crimea, with evaluation of the phylogenetic position of the new taxa using GenBank data

2019 ◽  
Vol 24 (5) ◽  
pp. 882
Author(s):  
Philipp Chetverikov ◽  
Pavel Klimov ◽  
Viktoria Yu. Letukhova ◽  
Géza Ripka ◽  
Sarah Zukoff
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Mite Species ◽  
New Combination ◽  
Phylogenetic Position ◽  
Endemic Plant ◽  
Plant Host ◽  
Mitochondrial Coi ◽  
Rdna Sequences ◽  
Eriophyoid Mites

We describe two new species and report new occurrences for six species of eriophyid mites (Eriophyoidea: Eriophyidae) in Crimea: Abacarus denticulifer n. sp. from Agropyron cristatum (L.) Gaertn. (Poaceae), Aceria aculiformis Sukhareva 1986 from Melica ciliata L. (Poaceae), Aceria peucedani (Canestrini 1891) from Seseli tortuosum L. (Apiaceae), Anthocoptes recki (Bagdasarian 1972) n. comb. (from Tegonotus) from Pistacia atlantica subsp. mutica (Fisch. & C.A. Mey.) (Anacardiaceae), Epitrimerus inulae Farkas 1963 from Inula germanica L. (Asteraceae), Phyllocoptes sanctus n. sp. from Potentilla recta subsp. obscura (Willd.) (Rosaceae), Phyllocoptes bilobospinosus Chetverikov 2019 (in Chetverikov et al. 2019) from Tamarix spp. (Tamaricaceae), Tegoprionus dentatus (Nalepa 1891) from Galium verum L. (Rubiaceae). For an Indian phyllocoptine mite species associated with Apluda mutica L. (Poaceae), a new combination was proposed: Abacarus muticus (Sur & Chakrabarti 2017) n. comb. (from Mesalox). Mitochondrial COI and D2 28S rDNA sequences of three phyllocoptine species from Crimea were obtained: A. denticulifer n. sp. (GenBank accession numbers MK415989 and MK408623), P. bilobospinosus (MK408624), and P. sanctus n. sp. (MK415988 and MK408622). Comparison of all COI and D2 28S sequences of Eriophyoidea from GenBank showed that sequences JF920111 and JF920110 Aceria tulipae are identical to JF920101 Aceria tosichella, and D2 28S sequence KP297379 Tegolophus sp. is identical to KM111079 Shevtchenkella sp., which indicates either one or more misidentifications or sample contamination. Molecular phylogenetic analyses (a) confirmed the morphology-based assignment of A. denticulifer n. sp. to the Abacarus hystrix s.l. species complex, (b) supported the monophyly of Abacarus hystrix s.l., (c) revealed that the genera Phyllocoptes, Epitrimerus, and Calepitrimerus are paraphyletic, and (d) indicated that Phyllocoptini (including P. sanctus n. sp.), which are associated with Rosaceae and Caprifoliaceae, are monophyletic. The position of P. bilobospinosus was uncertain in all analyses. Based on the results of our study, it is recommended that descriptions of new species in large, putatively paraphyletic genera of Eriophyoidea include comparisons with mite species associated with the same plant family. Our work also provides new evidence that a species in a large complex of cryptic species could have evolved a distinct morphology if it is associated with an endemic plant host restricted to a geographically isolated area.

A new Crocus L. (Iridaceae) species from SE Turkey, based on morphological and molecular data

Phytotaxa ◽  
2015 ◽  
Vol 239 (3) ◽  
pp. 223 ◽  
Author(s):  
Osman Erol ◽  
Doerte Harpke ◽  
Hasan Yıldırım
Keyword(s):  
Phylogenetic Analyses ◽  
Type Specimen ◽  
Morphological Characters ◽  
Molecular Data ◽  
Nuclear Ribosomal Dna ◽  
Phylogenetic Position ◽  
Full Description ◽  
New Taxon ◽  
Internal Transcribed Spacer Region ◽  
Se Turkey

Crocus musagecitii is described as a new species. Diagnostic morphological characters, a full description and detailed illustrations are provided on the basis of the type specimen and wild specimens. Morphologically, C. musagecitii is close to Crocus biflorus subsp. pseudonubigena. Crocus musagecitii differs from C. biflorus subsp. pseudonubigena by the lack of stripes or narrow purplish tongue on outside of outer tepals, wider tepals, and homogenously yellow anthers. In order to clarify the phylogenetic position of this species within the Crocus adamii species complex, we sequenced the internal transcribed spacer region (ITS: ITS1 + 5.8SrDNA + ITS2) and 5’ external transcribed spacer (ETS) of the nuclear ribosomal DNA (rDNA). A phylogenetic tree obtained by Bayesian phylogenetic inference is given. Phylogenetic analyses revealed that the new taxon is close to C. munzurensis. Crocus musagecitii differs from its phylogenetically closest relative C. munzurensis by the corm tunics (C. musagecitii: coriaceus; C. munzurensis: membranous), the number of leaves (C. musagecitii: up to 8; C. munzurensis: up to 4) and non-hairy leaf margins.

Antechiniella septentrionalis n. sp. (Spirurida: Acuariidae), a new intestinal nematode parasite of the tundra vole Microtus oeconomus (Pallas) (Rodentia: Muridae) in the north-east of Russia

2018 ◽  
Vol 93 (04) ◽  
pp. 494-503 ◽  
Author(s):  
E.S. Ivanova ◽  
N.E. Dokuchaev ◽  
S.E. Spiridonov
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
28S Rrna ◽  
Microtus Oeconomus ◽  
North East ◽  
The North ◽  
Intestinal Nematode ◽  
Magadan Region ◽  
Left Spicule ◽  
Tundra Vole

AbstractAntechiniella septentrionalis n. sp. (Spirurida: Acuariidae) is described from the duodenum of a tundra vole, Microtus oeconomus (Pallas), collected in the Magadan region in the north-east part of Russia. It differs from A. suffodiax (Beveridge & Barker, 1975) and A. sertatum Smales, 1991 mainly in having a larger number of postcloacal papillae (5–6 pairs vs 4 pairs), a differently shaped left spicule, the disposition of precloacal papillae in two rows vs one, and oblong vs oval eggs. Other differences include the different disposition of ovaries in A. septentrionalis n. sp and A. suffodiax and the different structure of deirids in A. septentrionalis n. sp. and A. sertatum. The new species was characterized molecularly (partial sequences for 18S rRNA, 28S rRNA and cox1 mtDNA). The phylogenetic analyses performed showed the affinity of the new species to the members of the Acuariidae and other spirurid nematodes.

scholarly journals Genetic diversity of the genus Terfezia (Pezizaceae, Pezizales): New species and new record from North Africa

Phytotaxa ◽  
2018 ◽  
Vol 334 (2) ◽  
pp. 183 ◽  
Author(s):  
Fatima El-Houaria ZITOUNI-HAOUAR ◽  
JUAN RAMÓN CARLAVILLA ◽  
GABRIEL MORENO ◽  
JOSÉ LUIS MANJÓN ◽  
ZOHRA FORTAS
Keyword(s):  
New Species ◽  
North Africa ◽  
Phylogenetic Analyses ◽  
Ribosomal Subunit ◽  
Morphological Characters ◽  
Phylogenetic Position ◽  
Unique Combination ◽  
Large Ribosomal Subunit ◽  
First Time ◽  
A New Species

Morphological and phylogenetic analyses of large ribosomal subunit (28S rDNA) and internal transcribed spacer (ITS rDNA) of Terfezia samples collected from several bioclimatic zones in Algeria and Spain revealed the presence of six distinct Terfezia species: T. arenaria, T. boudieri, T. claveryi; T. eliocrocae (reported here for the first time from North Africa), T. olbiensis, and a new species, T. crassiverrucosa sp. nov., proposed and described here, characterized by its phylogenetic position and unique combination of morphological characters. A discussion on the unresolved problems in the taxonomy of the spiny-spored Terfezia species is conducted after the present results.

scholarly journals Indopolystoma n. gen. (Monogenea, Polystomatidae) with the description of three new species and reassignment of eight known Polystoma species from Asian frogs (Anura, Rhacophoridae)

Parasite ◽  
2019 ◽  
Vol 26 ◽  
pp. 67
Author(s):  
Amira Chaabane ◽  
Olivier Verneau ◽  
Louis Du Preez
Keyword(s):  
New Species ◽  
New Genus ◽  
Phylogenetic Analyses ◽  
The Body ◽  
Molecular Dating ◽  
Phylogenetic Position ◽  
Morphological Evidence ◽  
Freshwater Turtles ◽  
Three New Species ◽  
Japan And China

The polystomes (Monogenea, Polystomatidae) radiated across semi-aquatic tetrapods including all three amphibian orders, freshwater turtles and the hippopotamus. Prior to this study, phylogenetic analyses revealed that the most diverse and widespread genus, Polystoma, was not monophyletic; a lineage comprising four undescribed species from the bladder of Zhangixalus spp. (Rhacophoridae) in Asia occupied a deep phylogenetic position. Regarding vicariance biogeography and molecular dating, the origin of this lineage is correlated with the breakup of Gondwanaland in the Mesozoic period. Based on a Bayesian analysis of four concatenated genes (18S, 28S, COI and 12S) and morphological evidence, one new genus, Indopolystoma n. gen., and three new species, sampled in Japan and China, are described here: Indopolystoma viridi n. sp. from Z. viridis of Japan, Indopolystoma elongatum n. sp. from Z. arboreus of Japan, and Indopolystoma parvum n. sp. from Z. omeimontis of China. Indopolystoma is unique amongst polystome genera infecting anurans by possessing a small haptor relative to the body size, posteriormost marginal hooklet C1 much bigger than hooklets C2–C8 with conspicuous broad blade and guard and a pair of hamuli lacking a deep notch. Eight species of Asian Polystoma, all from rhacophorids, are transferred as Indopolystoma carvirostris (Fan, Li & He, 2008) n. comb., I. hakgalense (Crusz & Ching, 1975) n. comb., I. indicum (Diengdoh & Tandon, 1991) n. comb., I. leucomystax (Zhang & Long, 1987) n. comb., I. mutus (Meng, Song & Ding, 2010) n. comb., I. pingbianensis (Fan, Wang & Li, 2004) n. comb., I. rhacophori (Yamaguti, 1936) n. comb., and I. zuoi (Shen, Wang & Fan, 2013) n. comb.

Two new Pythium species from southern China based on morphological and molecular characters

Phytotaxa ◽  
2020 ◽  
Vol 432 (3) ◽  
pp. 263-273
Author(s):  
JIA-JIA CHEN ◽  
HUI FENG ◽  
WEI SONG ◽  
XIAO-BO ZHENG
Keyword(s):  
New Species ◽  
Ribosomal Rna ◽  
Southern China ◽  
Phylogenetic Analyses ◽  
Pythium Species ◽  
Internal Transcribed Spacer Region ◽  
Two New Species ◽  
Molecular Phylogenetic ◽  
I Gene ◽  
Molecular Characters

Two new species of Pythium, namely P. subinflatum and P. xuzhouense, from soybean (Glycine max) in southern China are described based on their morphology and molecular phylogenetic analyses inferred from the internal transcribed spacer region of the ribosomal RNA gene and mitochondrial cytochrome c oxidase subunit I gene. Pythium subinflatum is characterized by globose to sub-globose or ovoid hyphal swellings, filamentous inflated sporangia, smooth oogonia, mostly diclinous antheridia, elongated along the oogonial stalk, subcircular, subglobose or fist-shaped antheridial cells, and aplerotic and slightly thick-walled oospores (2–3.5 µm); P. xuzhouense differs from other species in the genus by filamentous or lobulated sporangia, smooth oogonia, mostly diclinous, sometimes monoclinous antheridia, subclavate, falcate or semicircle to subcircular antheridial cells, and plerotic or nearly plerotic and thin-walled oospores (0.5–1.5 µm). In addition, the two new species are compared to closely related Pythium species regarding their phylogenetic positions and morphological features.

Systematics of north African Agama (Reptilia: Agamidae): a new species from the central Saharan mountains

Zootaxa ◽  
2011 ◽  
Vol 3098 (1) ◽  
pp. 26 ◽  
Author(s):  
PHILIPPE GENIEZ ◽  
JOSÉ M. PADIAL ◽  
PIERRE-ANDRÉ CROCHET
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Taxonomic Status ◽  
Species Group ◽  
Gene Fragment ◽  
North African ◽  
Mountain Ranges ◽  
The North ◽  
Lineage Divergence ◽  
Species Taxonomy

We studied the taxonomic status of the north African Agama species A. impalearis, A. castroviejoi, and A. boueti. The study of recently collected specimens and museum material, as well as phylogenetic analyses of a short 16S ribosomal RNA gene fragment, revealed the presence of an undescribed species in Adrar des Ifoghas (Mali), Aïr Mountains (Niger), Ahaggar Mountains (Algeria) and Tassili n’Ajjer (Algeria, Lybia), previously mistaken either as A. impalearis or A. agama. The new species, Agama tassiliensis n. sp., clearly belongs to the impalearis – boueti – spinosa species group but differs from these species, among other characters, by its red, reddish-orange or orange vertebral stripe in males, long and angular head, long limbs and toes (with 4 th toe usually slightly longer than 3 rd toe), long but low nuchal crest made of 10 to 15 spines (rarely 8–9 spines) and large number of supralabials (10–16, usually around 12). Interspecific uncorrected p- distances based on the 16S rDNA gene fragment are high, ranging from 3.9% between A. boueti and A. impalearis to 7.9% between A. spinosa and A. impalearis. The new species is sympatric with A. boueti at least in the Aïr Mountains and exhibits average mtDNA divergences of 6.2%, 7.4%, and 7.6% with A. spinosa, A. impalearis, and A. boueti, respectively. Agama boueti is paraphyletic relative to A. castroviejoi in the mtDNA tree, and mtDNA genetic divergences between populations of both species are lower than 1.0%, suggesting that A. castroviejoi is better treated as a junior synonym of A. boueti pending more detailed analyses. Scattered mountain ranges in the Sahara seem to have promoted lineage divergence and ultimately speciation in this group. Further work should be done to study species taxonomy and evolution in those areas.

Description of Tottonophyes enigmatica gen. nov., sp. nov. (Hydrozoa, Siphonophora, Calycophorae), with a reappraisal of the function and homology of nectophoral canals

Zootaxa ◽  
2018 ◽  
Vol 4415 (3) ◽  
pp. 452 ◽  
Author(s):  
P. R. PUGH ◽  
C.W. DUNN ◽  
S.H.D. HADDOCK
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Sister Group ◽  
The Other ◽  
Phylogenetic Position ◽  
Unique Combination ◽  
New Family ◽  
Molecular Phylogenetic ◽  
Distinct Morphology ◽  
A New Species

A new species of calycophoran siphonophore, Tottonophyes enigmatica gen. nov, sp. nov., is described. It has a unique combination of traits, some shared with prayomorphs (including two rounded nectophores) and some with clausophyid diphyomorphs (the nectophores are dissimilar, with one slightly larger and slightly to the anterior of the other, and both possess a somatocyst). Molecular phylogenetic analyses indicate that the new species is the sister group to all other diphyomorphs. A new family, Tottonophyidae, is established for it. Its phylogenetic position and distinct morphology help clarify diphyomorph evolution. The function and homology of the nectophoral canals and somatocyst is also re-examined and further clarification is given to their nomenclature.

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