scholarly journals Phytophthora ramorum and Phytophthora gonapodyides Differently Colonize and Contribute to the Decomposition of Green and Senesced Umbellularia californica Leaves in a Simulated Stream Environment

Forests ◽  
2019 ◽  
Vol 10 (5) ◽  
pp. 434
Author(s):  
Kamyar Aram ◽  
David M. Rizzo

Plant pathogenic as well as saprotrophic Phytophthora species are now known to inhabit forest streams and other surface waters. How they survive and function in aquatic ecosystems, however, remains largely uninvestigated. Phytophthora ramorum, an invasive pathogen in California forests, regularly occurs in forest streams, where it can colonize green leaves shed in the stream but is quickly and largely succeeded by saprotrophically competent clade 6 Phytophthora species, such as Phytophthora gonapodyides. We investigated, using controlled environment experiments, whether leaf litter quality, based on senescence, affects how P. ramorum and P. gonapodyides compete in leaf colonization and to what extent each species can contribute to leaf decomposition. We found that both Phytophthora species effectively colonized and persisted on green or yellow (senescing) bay leaves, but only P. gonapodyides could also colonize and persist on brown (fully senesced and dried) leaves. Both Phytophthora species similarly accelerated the decomposition of green leaves and yellow leaves compared with non-inoculated controls, but colonization of brown leaves by P. gonapodyides did not affect their decomposition rate.

Plant Disease ◽  
2007 ◽  
Vol 91 (10) ◽  
pp. 1245-1249 ◽  
Author(s):  
Nina Shishkoff

Although most Phytophthora species have a soilborne phase that is crucial for infection of roots and for survival away from the host, the details of the soil phase of Phytophthora ramorum are not yet fully understood. As mycelium ages, it becomes resistant to sterilization by acidic electrolyzed water (AEW), a product of the electrolysis which can be used as a disinfectant. Colonies of P. ramorum could be recovered from moist potting mix or sand for many months, whether buried as infected plant leaf tissue or as mycelium bearing chlamydospores, and the buried material was also resistant to treatment by AEW. There was no significant difference in recovery over time among treatments (sand or potting mix; infected plant tissue or mycelium); after approximately a year, colonies could be recovered at 0.8 to 14.3%. When excised roots were inoculated with P. ramorum sporangia and buried in mesh bags in potting mix, the pathogen was recovered from buried roots for at least 8 to 11 months, but it was not clear whether it was surviving as mycelium or chlamydospores. The roots of living plants of Acer macrophyllum, Buxus sempervirens, Camellia oleifera, C. sinensis, C. sasanqua, Lonicera hispidula, Taxus baccata, Umbellularia californica, Vaccinium macrocarpon, Viburnum davidii, V. tinus, V. × pragense, Rhododendron ‘Gloria’, and Syringa vulgaris were drenched with a sporangial solution of P. ramorum and incubated for a month; the pathogen could be recovered from roots of all plants except those of Buxus sempervirens and Lonicera hispidula. Recovery on selective agar medium (P5ARP) was from both washed and surface-sterilized roots, suggesting that the roots were internally infected. When chlamydospores were placed near roots and observed directly, they were seen to germinate, forming sporangia. Nearby roots became infected, the tips covered with sporangia. Therefore, P. ramorum appears to have a soil phase, at least under greenhouse and nursery conditions.


Water ◽  
2021 ◽  
Vol 13 (12) ◽  
pp. 1687
Author(s):  
Richard E. Lizotte ◽  
Peter C. Smiley ◽  
Robert B. Gillespie ◽  
Scott S. Knight

Conservation agriculture practices (CAs) have been internationally promoted and used for decades to enhance soil health and mitigate soil loss. An additional benefit of CAs has been mitigation of agricultural runoff impacts on aquatic ecosystems. Countries across the globe have agricultural agencies that provide programs for farmers to implement a variety of CAs. Increasingly there is a need to demonstrate that CAs can provide ecological improvements in aquatic ecosystems. Growing global concerns of lost habitat, biodiversity, and ecosystem services, increased eutrophication and associated harmful algal blooms are expected to intensify with increasing global populations and changing climate. We conducted a literature review identifying 88 studies linking CAs to aquatic ecological responses since 2000. Most studies were conducted in North America (78%), primarily the United States (73%), within the framework of the USDA Conservation Effects Assessment Project. Identified studies most frequently documented macroinvertebrate (31%), fish (28%), and algal (20%) responses to riparian (29%), wetland (18%), or combinations (32%) of CAs and/or responses to eutrophication (27%) and pesticide contamination (23%). Notable research gaps include better understanding of biogeochemistry with CAs, quantitative links between varying CAs and ecological responses, and linkages of CAs with aquatic ecosystem structure and function.


Plant Disease ◽  
2003 ◽  
Vol 87 (2) ◽  
pp. 203-203 ◽  
Author(s):  
D. De Merlier ◽  
A. Chandelier ◽  
M. Cavelier

In the past decade, a new Phytophthora species inducing shoot canker on Rhododendron and dieback of Viburnum has been observed in Europe, mainly in Germany and the Netherlands, and California. This new pathogen has been named Phytophthora ramorum (3). In May 2002, a diseased Viburnum plant (Viburnum bodnantense) from the Plant Protection Service (Ministry of Agriculture, Belgium) was submitted to our laboratory for diagnosis. Symptoms included wilting, leaves turning from green to brown, discolored vascular tissues, and root necrosis. The plant came from a Belgian ornamental nursery that obtained supplies of stock plants from the Netherlands. Pieces of necrotic root tissue were excised, surface-disinfected, and transferred aseptically to a Phytophthora selective medium. P. ramorum was identified based on morphological characteristics, including the production of numerous, thin-walled chlamydospores (25 to 70 µm in diameter, average 43 µm) and deciduous, semi-papillate sporangia arranged in clusters. Radial growth after 6 days at 20°C on V8 juice agar was 2.8 mm per day. Random amplified microsatellite markers (RAMS) (2) from the total genomic DNA of the Belgian strain (CBS 110901) were similar to those of P. ramorum reference strains (CBS 101330, CBS 101332, and CBS 101554). Using PCR primers specific for P. ramorum, the identification was confirmed by W. A. Man in't Veld (Plantenziektenkundige Dienst, Wageningen, the Netherlands) (1). A pathogenicity test was carried out on three sterile cuttings of Rhododendron catawbiense (3). Brown lesions were observed on the inoculated cuttings after 6 to 7 days. None of the three uninoculated cuttings showed symptoms of infection. P. ramorum was reisolated from lesion margins on the inoculated cuttings. To our knowledge, this is the first report of the fungus from Belgium. Since our initial observation, we have found P. ramorum in other Belgian nurseries on R. yakusimanum. References: (1) M. Garbelotto et al. US For. Ser. Gen. Tech. Rep. PSW-GRT. 184:765, 2002. (2) J. Hantula et al. Mycol. Res. 101:565, 1997. (3) S. Werres et al. Mycol. Res. 105:1155, 2001.


Plant Disease ◽  
2014 ◽  
Vol 98 (11) ◽  
pp. 1582-1582 ◽  
Author(s):  
S. Vitale ◽  
L. Luongo ◽  
M. Galli ◽  
A. Belisario

The genus Viburnum comprises over 150 species of shrubs and small trees such as Laurustinus (Viburnum tinus L.), which is one of the most widely used ornamental plants in private and public gardens. Furthermore, it commonly forms stands of natural woodland in the Mediterranean area. In autumn 2012, a survey was conducted to determine the presence of Phytophthora ramorum on Viburnum in commercial nurseries in the Latium region where wilting, dieback, and death of twigs were observed on 30% of the Laurustinus plants. A Phytophthora species was consistently recovered from soil rich in feeder roots from potted Laurustinus plants showing symptoms. Soil samples were baited with rhododendron leaves. Small pieces of leaf tissue cut from the margin of lesions were plated on P5ARPH selective medium (4). Pure cultures, obtained by single-hypha transfers on potato dextrose agar (PDA), were petaloid. Sporangia formation was induced on pepper seeds (3). Sporangia were almost spherical, ovoid or obpyriform, non-papillate and non-caducous, measuring 36.6 to 71.4 × 33.4 to 48.3 μm (average 53.3 × 37.4 μm) with a length/width ratio of 1.4. Chlamydospores were terminal and 25.2 to 37.9 μm in diameter. Isolates were considered heterothallic because they did not produce gametangia in culture or on the host. All isolates examined had 30 to 35°C as optimum temperatures. Based on these morphological characteristics, the isolates were identified as Phytophthora hydropathica (2). Morphological identification was confirmed by internal transcribed spacer (ITS), and mitochondrial partial cytochrome oxidase subunit 2 (CoxII) with BLAST analysis in the NCBI database revealing 99% identity with ITS and 100% identity with CoxII. The sequences of the three isolates AB234, AB235, and AB236 were deposited in European Nucleotide Archive (ENA) with the accession nos. HG934148, HG934149, and HG934150 for ITS and HG934151, HG934152, and HG934153 for CoxII, respectively. Pathogenicity tests were conducted in the greenhouse on a total of six 1-year-old shoots cut from V. tinus plants with two inoculation points each. Mycelial plugs cut from the margins of actively growing 8-day-old cultures on PDA were inserted through the epidermis into the phloem. Controls were treated as described above except that sterile PDA plugs replaced the inoculum. Shoots were incubated in test tubes with sterile water in the dark at 24 ± 2°C. After 2 weeks, lesions were evident at the inoculation points and symptoms were similar to those caused by natural infection. P. hydropathica was consistently re-isolated from the margin of lesions, while controls remained symptomless. In the United States in 2008, P. hydropathica was described as spreading from irrigation water to Rhododendron catawbiense and Kalmia latifolia (2). This pathogen can also attack several other horticultural crops (1), but to our knowledge, this is the first report of P. hydropathica causing wilting and shoot dieback on V. tinus. References: (1) C. X. Hong et al. Plant Dis. 92:1201, 2008. (2) C. X. Hong et al. Plant Pathol. 59:913, 2010. (3) E. Ilieva et al. Eur. J. Plant Path. 101:623, 1995. (4) S. N. Jeffers and S. B. Martin. Plant Dis. 70:1038, 1986.


Author(s):  
Mohamad Ali Sanjari Shahrezaei ◽  
Seyed Mohammad-Reza Taheri ◽  
Hesam Nikfazan ◽  
Alexandra Satalov ◽  
Mohsen Moazzami Gudarzi ◽  
...  

Though deemed to be of high importance for the determination of environmental impact of 2D materials upon their release into surface waters, control over the conformational engineering of atomically thin...


2016 ◽  
Vol 17 (2) ◽  
pp. 64-75 ◽  
Author(s):  
Corina Junker ◽  
Patrick Goff ◽  
Stefan Wagner ◽  
Sabine Werres

Two commercial woody ornamental nurseries were sampled for the presence of Phytophthora species over a period of three years between 2011 and 2014. The samples were taken every two months at different propagation (greenhouses, plastic tunnels) and cultivation (container stands) areas as well as from nearby pathways and from a water recycling system with a slow sand filter. Furthermore, different materials like soil, substrates, residues, wind-carried leaves, water and sediment were sampled. In total, 12 known Phytophthora species could be detected. Further, three isolates did not match any of the known species. Phytophthora ramorum, P. gonapodyides, and P. plurivora were the species with the highest detection rates. Phytophthora ramorum could be detected during all seasons of the year. In total, the puddles on the pathways had the highest percentage of positive detections. Residues, wind-carried leaves and water and sediment from the water runoffs were also good places for Phytophthora survival. In both nurseries, the plant samples showed very low infection rates. Ideas for surveys and management are discussed. Accepted for publication 14 March 2016. Published 11 April 2016.


2020 ◽  
Vol 96 (11) ◽  
Author(s):  
Cátia Carreira ◽  
Christian Lønborg ◽  
Michael Kühl ◽  
Ana I Lillebø ◽  
Ruth-Anne Sandaa ◽  
...  

ABSTRACT Microbial mats are compacted, surface-associated microbial ecosystems reminiscent of the first living communities on early Earth. While often considered predominantly prokaryotic, recent findings show that both fungi and viruses are ubiquitous in microbial mats, albeit their functional roles remain unknown. Fungal research has mostly focused on terrestrial and freshwater ecosystems where fungi are known as important recyclers of organic matter, whereas viruses are exceptionally abundant and important in aquatic ecosystems. Here, viruses have shown to affect organic matter cycling and the diversity of microbial communities by facilitating horizontal gene transfer and cell lysis. We hypothesise fungi and viruses to have similar roles in microbial mats. Based on the analysis of previous research in terrestrial and aquatic ecosystems, we outline novel hypotheses proposing strong impacts of fungi and viruses on element cycling, food web structure and function in microbial mats, and outline experimental approaches for studies needed to understand these interactions.


2010 ◽  
Vol 11 (1) ◽  
pp. 28
Author(s):  
K. E. Sechler ◽  
M. M. Carras ◽  
N. Shishkoff ◽  
P. W. Tooley

Detection of Phytophthora ramorum in US commercial nurseries has led to a number of quarantine regulations. Methods such as real-time PCR (RT-PCR) provide rapid and reliable detection that can supplement attempts to culture P. ramorum from symptomatic tissue. We adapted and optimized a previously described mitochondrial gene-based RT-PCR assay for use with a Cepheid SmartCycler v.1 and ready-to-use lyophilized PCR beads. The detection limit was 10 fg of P. ramorum genomic DNA. No cross-reactivity was observed on the SmartCycler for seven additional Phytophthora species tested, which included species known to cross-react in other assays as well as recently described species Phytophthora foliorum and P. kernoviae. The SmartCycler assay described here was used to detect P. ramorum in a set of 2008 California field samples with a high degree of accuracy. Accepted for publication 13 October 2009. Published 13 February 2010.


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