scholarly journals Bayesian Reasoning with Trained Neural Networks

Entropy ◽  
2021 ◽  
Vol 23 (6) ◽  
pp. 693
Author(s):  
Jakob Knollmüller ◽  
Torsten Enßlin
Keyword(s):  
Neural Networks ◽  
Bayesian Inference ◽  
Prior Knowledge ◽  
State Of The Art ◽  
Generative Models ◽  
Sampling Techniques ◽  
Bayesian Reasoning ◽  
Inference Problems

We showed how to use trained neural networks to perform Bayesian reasoning in order to solve tasks outside their initial scope. Deep generative models provide prior knowledge, and classification/regression networks impose constraints. The tasks at hand were formulated as Bayesian inference problems, which we approximately solved through variational or sampling techniques. The approach built on top of already trained networks, and the addressable questions grew super-exponentially with the number of available networks. In its simplest form, the approach yielded conditional generative models. However, multiple simultaneous constraints constitute elaborate questions. We compared the approach to specifically trained generators, showed how to solve riddles, and demonstrated its compatibility with state-of-the-art architectures.

scholarly journals Joint Image Emotion Classification and Distribution Learning via Deep Convolutional Neural Network

2017 ◽  
Author(s):  
Jufeng Yang ◽  
Dongyu She ◽  
Ming Sun
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Prior Knowledge ◽  
State Of The Art ◽  
Ground Truth ◽  
Majority Voting ◽  
Emotion Classification ◽  
Voting Scheme ◽  
Label Distribution ◽  
Similarity Information

Visual sentiment analysis is attracting more and more attention with the increasing tendency to express emotions through visual contents. Recent algorithms in convolutional neural networks (CNNs) considerably advance the emotion classification, which aims to distinguish differences among emotional categories and assigns a single dominant label to each image. However, the task is inherently ambiguous since an image usually evokes multiple emotions and its annotation varies from person to person. In this work, we address the problem via label distribution learning (LDL) and develop a multi-task deep framework by jointly optimizing both classification and distribution prediction. While the proposed method prefers to the distribution dataset with annotations of different voters, the majority voting scheme is widely adopted as the ground truth in this area, and few dataset has provided multiple affective labels. Hence, we further exploit two weak forms of prior knowledge, which are expressed as similarity information between labels, to generate emotional distribution for each category. The experiments conducted on both distribution datasets, i.e., Emotion6, Flickr_LDL, Twitter_LDL, and the largest single emotion dataset, i.e., Flickr and Instagram, demonstrate the proposed method outperforms the state-of-the-art approaches.

scholarly journals Dynamic Hypergraph Neural Networks

2019 ◽  
Author(s):  
Jianwen Jiang ◽  
Yuxuan Wei ◽  
Yifan Feng ◽  
Jingxuan Cao ◽  
Yue Gao
Keyword(s):  
Neural Networks ◽  
Deep Learning ◽  
Prior Knowledge ◽  
State Of The Art ◽  
Citation Network ◽  
High Order ◽  
Learning Methods ◽  
Inherent Structure ◽  
Two Phases ◽  
Diverse Data

In recent years, graph/hypergraph-based deep learning methods have attracted much attention from researchers. These deep learning methods take graph/hypergraph structure as prior knowledge in the model. However, hidden and important relations are not directly represented in the inherent structure. To tackle this issue, we propose a dynamic hypergraph neural networks framework (DHGNN), which is composed of the stacked layers of two modules: dynamic hypergraph construction (DHG) and hypergrpah convolution (HGC). Considering initially constructed hypergraph is probably not a suitable representation for data, the DHG module dynamically updates hypergraph structure on each layer. Then hypergraph convolution is introduced to encode high-order data relations in a hypergraph structure. The HGC module includes two phases: vertex convolution and hyperedge convolution, which are designed to aggregate feature among vertices and hyperedges, respectively. We have evaluated our method on standard datasets, the Cora citation network and Microblog dataset. Our method outperforms state-of-the-art methods. More experiments are conducted to demonstrate the effectiveness and robustness of our method to diverse data distributions.

AutoLinker: Automatic Fragment Linking with Deep Conditional Transformer Neural Networks

2020 ◽  
Author(s):  
Yuyao Yang ◽  
Shuangjia Zheng ◽  
Shimin Su ◽  
Jun Xu ◽  
Hongming Chen
Keyword(s):  
Neural Networks ◽  
Drug Discovery ◽  
Drug Design ◽  
State Of The Art ◽  
The State ◽  
Generative Model ◽  
Lead Optimization ◽  
Scaffold Hopping ◽  
Reference Models ◽  
Lead Generation

Fragment based drug design represents a promising drug discovery paradigm complimentary to the traditional HTS based lead generation strategy. How to link fragment structures to increase compound affinity is remaining a challenge task in this paradigm. Hereby a novel deep generative model (AutoLinker) for linking fragments is developed with the potential for applying in the fragment-based lead generation scenario. The state-of-the-art transformer architecture was employed to learn the linker grammar and generate novel linker. Our results show that, given starting fragments and user customized linker constraints, our AutoLinker model can design abundant drug-like molecules fulfilling these constraints and its performance was superior to other reference models. Moreover, several examples were showcased that AutoLinker can be useful tools for carrying out drug design tasks such as fragment linking, lead optimization and scaffold hopping.

Levenshtein Augmentation Improves Performance of SMILES Based Deep-Learning Synthesis Prediction

2020 ◽  
Author(s):  
Dean Sumner ◽  
Jiazhen He ◽  
Amol Thakkar ◽  
Ola Engkvist ◽  
Esben Jannik Bjerrum
Keyword(s):  
Neural Networks ◽  
Pattern Recognition ◽  
Deep Learning ◽  
Recurrent Neural Networks ◽  
Data Augmentation ◽  
State Of The Art ◽  
Sequence Similarity ◽  
Learning Models ◽  
Underlying Network

<p>SMILES randomization, a form of data augmentation, has previously been shown to increase the performance of deep learning models compared to non-augmented baselines. Here, we propose a novel data augmentation method we call “Levenshtein augmentation” which considers local SMILES sub-sequence similarity between reactants and their respective products when creating training pairs. The performance of Levenshtein augmentation was tested using two state of the art models - transformer and sequence-to-sequence based recurrent neural networks with attention. Levenshtein augmentation demonstrated an increase performance over non-augmented, and conventionally SMILES randomization augmented data when used for training of baseline models. Furthermore, Levenshtein augmentation seemingly results in what we define as <i>attentional gain </i>– an enhancement in the pattern recognition capabilities of the underlying network to molecular motifs.</p>

scholarly journals Using spatial-temporal ensembles of convolutional neural networks for lumen segmentation in ureteroscopy

2021 ◽  
Author(s):  
Jorge F. Lazo ◽  
Aldo Marzullo ◽  
Sara Moccia ◽  
Michele Catellani ◽  
Benoit Rosa ◽  
...  
Keyword(s):  
Neural Networks ◽  
Convolutional Neural Networks ◽  
State Of The Art ◽  
Automatic Segmentation ◽  
Temporal Information ◽  
Invasive Technique ◽  
Dice Similarity Coefficient ◽  
Specular Reflections ◽  
Lumen Segmentation ◽  
Previous State

Abstract Purpose Ureteroscopy is an efficient endoscopic minimally invasive technique for the diagnosis and treatment of upper tract urothelial carcinoma. During ureteroscopy, the automatic segmentation of the hollow lumen is of primary importance, since it indicates the path that the endoscope should follow. In order to obtain an accurate segmentation of the hollow lumen, this paper presents an automatic method based on convolutional neural networks (CNNs). Methods The proposed method is based on an ensemble of 4 parallel CNNs to simultaneously process single and multi-frame information. Of these, two architectures are taken as core-models, namely U-Net based in residual blocks ($$m_1$$ m 1 ) and Mask-RCNN ($$m_2$$ m 2 ), which are fed with single still-frames I(t). The other two models ($$M_1$$ M 1 , $$M_2$$ M 2 ) are modifications of the former ones consisting on the addition of a stage which makes use of 3D convolutions to process temporal information. $$M_1$$ M 1 , $$M_2$$ M 2 are fed with triplets of frames ($$I(t-1)$$ I ( t - 1 ) , I(t), $$I(t+1)$$ I ( t + 1 ) ) to produce the segmentation for I(t). Results The proposed method was evaluated using a custom dataset of 11 videos (2673 frames) which were collected and manually annotated from 6 patients. We obtain a Dice similarity coefficient of 0.80, outperforming previous state-of-the-art methods. Conclusion The obtained results show that spatial-temporal information can be effectively exploited by the ensemble model to improve hollow lumen segmentation in ureteroscopic images. The method is effective also in the presence of poor visibility, occasional bleeding, or specular reflections.

scholarly journals Improving Semi-Supervised Learning for Audio Classification with FixMatch

Electronics ◽  
2021 ◽  
Vol 10 (15) ◽  
pp. 1807
Author(s):  
Sascha Grollmisch ◽  
Estefanía Cano
Keyword(s):  
Neural Networks ◽  
Supervised Learning ◽  
Transfer Learning ◽  
Data Transfer ◽  
State Of The Art ◽  
Training Data ◽  
Audio Classification ◽  
Image Domain ◽  
Full Dataset ◽  
Audio Data

Including unlabeled data in the training process of neural networks using Semi-Supervised Learning (SSL) has shown impressive results in the image domain, where state-of-the-art results were obtained with only a fraction of the labeled data. The commonality between recent SSL methods is that they strongly rely on the augmentation of unannotated data. This is vastly unexplored for audio data. In this work, SSL using the state-of-the-art FixMatch approach is evaluated on three audio classification tasks, including music, industrial sounds, and acoustic scenes. The performance of FixMatch is compared to Convolutional Neural Networks (CNN) trained from scratch, Transfer Learning, and SSL using the Mean Teacher approach. Additionally, a simple yet effective approach for selecting suitable augmentation methods for FixMatch is introduced. FixMatch with the proposed modifications always outperformed Mean Teacher and the CNNs trained from scratch. For the industrial sounds and music datasets, the CNN baseline performance using the full dataset was reached with less than 5% of the initial training data, demonstrating the potential of recent SSL methods for audio data. Transfer Learning outperformed FixMatch only for the most challenging dataset from acoustic scene classification, showing that there is still room for improvement.

scholarly journals SketchGNN: Semantic Sketch Segmentation with Graph Neural Networks

2021 ◽  
Vol 40 (3) ◽  
pp. 1-13
Author(s):  
Lumin Yang ◽  
Jiajie Zhuang ◽  
Hongbo Fu ◽  
Xiangzhi Wei ◽  
Kun Zhou ◽  
...  
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Network Architecture ◽  
Large Scale ◽  
State Of The Art ◽  
Semantic Segmentation ◽  
Structure Information ◽  
Graph Neural Networks ◽  
Node Labels ◽  
Point Level

We introduce SketchGNN , a convolutional graph neural network for semantic segmentation and labeling of freehand vector sketches. We treat an input stroke-based sketch as a graph with nodes representing the sampled points along input strokes and edges encoding the stroke structure information. To predict the per-node labels, our SketchGNN uses graph convolution and a static-dynamic branching network architecture to extract the features at three levels, i.e., point-level, stroke-level, and sketch-level. SketchGNN significantly improves the accuracy of the state-of-the-art methods for semantic sketch segmentation (by 11.2% in the pixel-based metric and 18.2% in the component-based metric over a large-scale challenging SPG dataset) and has magnitudes fewer parameters than both image-based and sequence-based methods.

scholarly journals Robust and fast post-processing of single-shot spin qubit detection events with a neural network

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Tom Struck ◽  
Javed Lindner ◽  
Arne Hollmann ◽  
Floyd Schauer ◽  
Andreas Schmidbauer ◽  
...  
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Bayesian Inference ◽  
Rabi Oscillation ◽  
Detection Methods ◽  
Measured Signal ◽  
Single Shot ◽  
Post Processing ◽  
Readout Signal ◽  
Spin Qubit

AbstractEstablishing low-error and fast detection methods for qubit readout is crucial for efficient quantum error correction. Here, we test neural networks to classify a collection of single-shot spin detection events, which are the readout signal of our qubit measurements. This readout signal contains a stochastic peak, for which a Bayesian inference filter including Gaussian noise is theoretically optimal. Hence, we benchmark our neural networks trained by various strategies versus this latter algorithm. Training of the network with 106 experimentally recorded single-shot readout traces does not improve the post-processing performance. A network trained by synthetically generated measurement traces performs similar in terms of the detection error and the post-processing speed compared to the Bayesian inference filter. This neural network turns out to be more robust to fluctuations in the signal offset, length and delay as well as in the signal-to-noise ratio. Notably, we find an increase of 7% in the visibility of the Rabi oscillation when we employ a network trained by synthetic readout traces combined with measured signal noise of our setup. Our contribution thus represents an example of the beneficial role which software and hardware implementation of neural networks may play in scalable spin qubit processor architectures.

Equivariant Adversarial Network for Image-to-image Translation

2021 ◽  
Vol 17 (2s) ◽  
pp. 1-14
Author(s):  
Masoumeh Zareapoor ◽  
Jie Yang
Keyword(s):  
State Of The Art ◽  
Generative Models ◽  
Generative Model ◽  
Target Domain ◽  
Adversarial Network ◽  
Proposed Model ◽  
Image Translation ◽  
Great Performance ◽  
Representative Model ◽  
The Ideal

Image-to-Image translation aims to learn an image from a source domain to a target domain. However, there are three main challenges, such as lack of paired datasets, multimodality, and diversity, that are associated with these problems and need to be dealt with. Convolutional neural networks (CNNs), despite of having great performance in many computer vision tasks, they fail to detect the hierarchy of spatial relationships between different parts of an object and thus do not form the ideal representative model we look for. This article presents a new variation of generative models that aims to remedy this problem. We use a trainable transformer, which explicitly allows the spatial manipulation of data within training. This differentiable module can be augmented into the convolutional layers in the generative model, and it allows to freely alter the generated distributions for image-to-image translation. To reap the benefits of proposed module into generative model, our architecture incorporates a new loss function to facilitate an effective end-to-end generative learning for image-to-image translation. The proposed model is evaluated through comprehensive experiments on image synthesizing and image-to-image translation, along with comparisons with several state-of-the-art algorithms.

scholarly journals Communication Failure Resilient Distributed Neural Network for Edge Devices

Electronics ◽  
2021 ◽  
Vol 10 (14) ◽  
pp. 1614
Author(s):  
Jonghun Jeong ◽  
Jong Sung Park ◽  
Hoeseok Yang
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
High Performance ◽  
State Of The Art ◽  
Wearable Devices ◽  
Communication Failure ◽  
Canadian Institute ◽  
Multiple Devices ◽  
Knowledge Distillation ◽  
Partitioning Technique

Recently, the necessity to run high-performance neural networks (NN) is increasing even in resource-constrained embedded systems such as wearable devices. However, due to the high computational and memory requirements of the NN applications, it is typically infeasible to execute them on a single device. Instead, it has been proposed to run a single NN application cooperatively on top of multiple devices, a so-called distributed neural network. In the distributed neural network, workloads of a single big NN application are distributed over multiple tiny devices. While the computation overhead could effectively be alleviated by this approach, the existing distributed NN techniques, such as MoDNN, still suffer from large traffics between the devices and vulnerability to communication failures. In order to get rid of such big communication overheads, a knowledge distillation based distributed NN, called Network of Neural Networks (NoNN), was proposed, which partitions the filters in the final convolutional layer of the original NN into multiple independent subsets and derives smaller NNs out of each subset. However, NoNN also has limitations in that the partitioning result may be unbalanced and it considerably compromises the correlation between filters in the original NN, which may result in an unacceptable accuracy degradation in case of communication failure. In this paper, in order to overcome these issues, we propose to enhance the partitioning strategy of NoNN in two aspects. First, we enhance the redundancy of the filters that are used to derive multiple smaller NNs by means of averaging to increase the immunity of the distributed NN to communication failure. Second, we propose a novel partitioning technique, modified from Eigenvector-based partitioning, to preserve the correlation between filters as much as possible while keeping the consistent number of filters distributed to each device. Throughout extensive experiments with the CIFAR-100 (Canadian Institute For Advanced Research-100) dataset, it has been observed that the proposed approach maintains high inference accuracy (over 70%, 1.53× improvement over the state-of-the-art approach), on average, even when a half of eight devices in a distributed NN fail to deliver their partial inference results.

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