scholarly journals Computation in Complex Networks

Entropy ◽  
2021 ◽  
Vol 23 (2) ◽  
pp. 192
Author(s):  
Clara Pizzuti ◽  
Annalisa Socievole
Keyword(s):  
Complex Networks ◽  
Complex Network ◽  
Special Issue ◽  
Network Research

The Special Issue on “Computation in Complex Networks” focused on gathering highly original papers in the field of current complex network research [...]

scholarly journals Synchronization in a Novel Local-World Dynamical Network Model

2014 ◽  
Vol 2014 ◽  
pp. 1-8 ◽  
Author(s):  
Jianeng Tang ◽  
Peizhong Liu
Keyword(s):  
Complex Networks ◽  
Complex Network ◽  
Network Model ◽  
Optimal Growth ◽  
Dynamical Networks ◽  
Dynamical Network ◽  
Network Research ◽  
Topology Model ◽  
The Relationship ◽  
Random Failures

Advances in complex network research have recently stimulated increasing interests in understanding the relationship between the topology and dynamics of complex networks. In the paper, we study the synchronizability of a class of local-world dynamical networks. Then, we have proposed a local-world synchronization-optimal growth topology model. Compared with the local-world evolving network model, it exhibits a stronger synchronizability. We also investigate the robustness of the synchronizability with respect to random failures and the fragility of the synchronizability with specific removal of nodes.

Information on evolutionary age in redundancy of complex network

2019 ◽  
Vol 33 (27) ◽  
pp. 1950331
Author(s):  
Shiguo Deng ◽  
Henggang Ren ◽  
Tongfeng Weng ◽  
Changgui Gu ◽  
Huijie Yang
Keyword(s):  
Principal Component Analysis ◽  
Complex Networks ◽  
Metabolic Network ◽  
Complex Network ◽  
Cellular Networks ◽  
Topological Structure ◽  
Quantitative Measure ◽  
Principal Component ◽  
Evolutionary Information ◽  
Local Patterns

Evolutionary processes of many complex networks in reality are dominated by duplication and divergence. This mechanism leads to redundant structures, i.e. some nodes share most of their neighbors and some local patterns are similar, called redundancy of network. An interesting reverse problem is to discover evolutionary information from the present topological structure. We propose a quantitative measure of redundancy of network from the perspective of principal component analysis. The redundancy of a community in the empirical human metabolic network is negatively and closely related with its evolutionary age, which is consistent with that for the communities in the modeling protein–protein network. This behavior can be used to find the evolutionary difference stored in cellular networks.

scholarly journals CNFE-SE: a novel approach combining complex network-based feature engineering and stacked ensemble to predict the success of intrauterine insemination and ranking the features

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Sima Ranjbari ◽  
Toktam Khatibi ◽  
Ahmad Vosough Dizaji ◽  
Hesamoddin Sajadi ◽  
Mehdi Totonchi ◽  
...  
Keyword(s):  
Complex Networks ◽  
Complex Network ◽  
Semen Quality ◽  
Intrauterine Insemination ◽  
Machine Learning Algorithms ◽  
Semen Parameters ◽  
Feature Engineering ◽  
Operating Characteristics ◽  
Scoring Method ◽  
Novel Approach

Abstract Background Intrauterine Insemination (IUI) outcome prediction is a challenging issue which the assisted reproductive technology (ART) practitioners are dealing with. Predicting the success or failure of IUI based on the couples' features can assist the physicians to make the appropriate decision for suggesting IUI to the couples or not and/or continuing the treatment or not for them. Many previous studies have been focused on predicting the in vitro fertilization (IVF) and intracytoplasmic sperm injection (ICSI) outcome using machine learning algorithms. But, to the best of our knowledge, a few studies have been focused on predicting the outcome of IUI. The main aim of this study is to propose an automatic classification and feature scoring method to predict intrauterine insemination (IUI) outcome and ranking the most significant features. Methods For this purpose, a novel approach combining complex network-based feature engineering and stacked ensemble (CNFE-SE) is proposed. Three complex networks are extracted considering the patients' data similarities. The feature engineering step is performed on the complex networks. The original feature set and/or the features engineered are fed to the proposed stacked ensemble to classify and predict IUI outcome for couples per IUI treatment cycle. Our study is a retrospective study of a 5-year couples' data undergoing IUI. Data is collected from Reproductive Biomedicine Research Center, Royan Institute describing 11,255 IUI treatment cycles for 8,360 couples. Our dataset includes the couples' demographic characteristics, historical data about the patients' diseases, the clinical diagnosis, the treatment plans and the prescribed drugs during the cycles, semen quality, laboratory tests and the clinical pregnancy outcome. Results Experimental results show that the proposed method outperforms the compared methods with Area under receiver operating characteristics curve (AUC) of 0.84 ± 0.01, sensitivity of 0.79 ± 0.01, specificity of 0.91 ± 0.01, and accuracy of 0.85 ± 0.01 for the prediction of IUI outcome. Conclusions The most important predictors for predicting IUI outcome are semen parameters (sperm motility and concentration) as well as female body mass index (BMI).

scholarly journals Topology Identification of Complex Network via Chaotic Ant Swarm Algorithm

2013 ◽  
Vol 2013 ◽  
pp. 1-5 ◽  
Author(s):  
Haipeng Peng ◽  
Lixiang Li ◽  
Jürgen Kurths ◽  
Shudong Li ◽  
Yixian Yang
Keyword(s):  
Complex Networks ◽  
Numerical Simulations ◽  
Complex Network ◽  
Parameter Optimization ◽  
Ant Algorithm ◽  
Structure Parameters ◽  
Topology Identification ◽  
Unknown Structure ◽  
Swarm Algorithm ◽  
Scientific Fields

Nowadays, the topology of complex networks is essential in various fields as engineering, biology, physics, and other scientific fields. We know in some general cases that there may be some unknown structure parameters in a complex network. In order to identify those unknown structure parameters, a topology identification method is proposed based on a chaotic ant swarm algorithm in this paper. The problem of topology identification is converted into that of parameter optimization which can be solved by a chaotic ant algorithm. The proposed method enables us to identify the topology of the synchronization network effectively. Numerical simulations are also provided to show the effectiveness and feasibility of the proposed method.

scholarly journals The coevolution of networks and health

2017 ◽  
Vol 5 (3) ◽  
pp. 249-256 ◽  
Author(s):  
DAVID R. SCHAEFER ◽  
JIMI ADAMS
Keyword(s):  
Human Health ◽  
Network Dynamics ◽  
Future Research ◽  
Special Issue ◽  
Causal Explanations ◽  
Network Research ◽  
Literature Highlight ◽  
The Relationship

Historically, health has played an important role in network research, and vice versa (Valente, 2010). This intersection has contributed to how we understand human health as well as the development of network concepts, theory, and methods. Throughout, dynamics have featured prominently. Even when limited to static methods, the emphasis in each of these fields on providing causal explanations has led researchers to draw upon theories that are dynamic, often explicitly. Here, we elaborate a variety of ways to conceptualize the relationship between health and network dynamics, show how these possibilities are reflected in the existing literature, highlight how the articles within this special issue expand that understanding, and finally, identify paths for future research to push this intersection forward.

Differential Evolution Dynamic Analysis in the Form of Complex Networks

2016 ◽  
pp. 285-318 ◽  
Author(s):  
Lenka Skanderova ◽  
Ivan Zelinka
Keyword(s):  
Evolutionary Algorithms ◽  
Differential Evolution ◽  
Complex Networks ◽  
Dynamic Analysis ◽  
Evolutionary Algorithm ◽  
Complex Network ◽  
Novel Method

In this work, we investigate the dynamics of Differential Evolution (DE) using complex networks. In this pursuit, we would like to clarify the term complex network and analyze its properties briefly. This chapter presents a novel method for analysis of the dynamics of evolutionary algorithms in the form of complex networks. We discuss the analogy between individuals in populations in an arbitrary evolutionary algorithm and vertices of a complex network as well as between edges in a complex network and communication between individuals in a population. We also discuss the dynamics of the analysis.

Modern Diffusion of Products with Complex Network Models

2011 ◽  
pp. 119-133
Author(s):  
Atsushi Tanaka
Keyword(s):  
Complex Networks ◽  
Marketing Strategy ◽  
Complex Network ◽  
Network Models ◽  
Information Propagation ◽  
Multiagent Simulation ◽  
Product Marketing ◽  
Winner Takes All ◽  
Complex Network Models

In this chapter, some important matters of complex networks and their models are reviewed shortly, and then the modern diffusion of products under the information propagation using multiagent simulation is discussed. The remarkable phenomena like “Winner-Takes-All” and “Chasm” can be observed, and one product marketing strategy is also proposed.

scholarly journals Introduction to the special issue “Economics and Complex Networks”

2020 ◽  
Vol 72 (1) ◽  
pp. 1-4
Author(s):  
Teruyoshi Kobayashi ◽  
Naoki Masuda
Keyword(s):  
Complex Networks ◽  
Special Issue

scholarly journals Comparison of complex networks and tree-based methods of phylogenetic analysis and proposal of a bootstrap method

PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e4349 ◽  
Author(s):  
Aristóteles Góes-Neto ◽  
Marcelo V.C. Diniz ◽  
Daniel S. Carvalho ◽  
Gilberto C. Bomfim ◽  
Angelo A. Duarte ◽  
...  
Keyword(s):  
Biological Sciences ◽  
Phylogenetic Analysis ◽  
Complex Networks ◽  
Complex Network ◽  
Bootstrap Method ◽  
Molecular Data ◽  
Data Sets ◽  
Fungal Cell ◽  
Taxonomic Groups ◽  
Inference Methods

Complex networks have been successfully applied to the characterization and modeling of complex systems in several distinct areas of Biological Sciences. Nevertheless, their utilization in phylogenetic analysis still needs to be widely tested, using different molecular data sets and taxonomic groups, and, also, by comparing complex networks approach to current methods in phylogenetic analysis. In this work, we compare all the four main methods of phylogenetic analysis (distance, maximum parsimony, maximum likelihood, and Bayesian) with a complex networks method that has been used to provide a phylogenetic classification based on a large number of protein sequences as those related to the chitin metabolic pathway and ATP-synthase subunits. In order to perform a close comparison to these methods, we selected Basidiomycota fungi as the taxonomic group and used a high-quality, manually curated and characterized database of chitin synthase sequences. This enzymatic protein plays a key role in the synthesis of one of the exclusive features of the fungal cell wall: the presence of chitin. The communities (modules) detected by the complex network method corresponded exactly to the groups retrieved by the phylogenetic inference methods. Additionally, we propose a bootstrap method for the complex network approach. The statistical results we have obtained with this method were also close to those obtained using traditional bootstrap methods.

Sign in / Sign up

Export Citation Format

Share Document