scholarly journals Karyotype Organization of the Endangered Species Yellow Cardinal (Gubernatrix cristata)

DNA ◽  
2021 ◽  
Vol 1 (2) ◽  
pp. 77-84
Author(s):  
Sandra Eloisa Bülau ◽  
Rafael Kretschmer ◽  
Ivanete de Oliveira Furo ◽  
Edivaldo Herculano Correa de Oliveira ◽  
Thales Renato Ochotorena de Freitas
Keyword(s):  
Endangered Species ◽  
Genome Assembly ◽  
18S Rdna ◽  
Chromosome Organization ◽  
Ancestral Condition ◽  
Starting Point ◽  
First Time ◽  
Threatened Status ◽  
Organization Evolution

Karyotypic analyses have several applications in studies of chromosome organization, evolution, and cytotaxonomy. They are also essential to genome assembly projects. Here, we present for the first time the karyotype description of the endangered species yellow cardinal, Gubernatrix cristata (Passeriformes, Thraupidae), using conventional staining with Giemsa and 18S rDNA probes. This species has 78 chromosomes, with 12 pairs of macrochromosomes and 27 microchromosome pairs. The 18S rDNA clusters were found in four microchromosomes. Our results revealed that G. cristata has a typical avian karyotype (approximately 80 chromosomes). However, G. cristata has an apomorphic state in relation to the 18S rDNA distribution since the ancestral condition corresponds to only two microchromosomes with these sequences. Probably, duplications and translocations were responsible for increasing the number of 18S rDNA clusters in G. cristata. The results were compared and discussed with respect to other Thraupidae and Passeriformes members. Considering the globally threatened status of G. cristata, we believe that its karyotype description could be a starting point for future cytogenetics and sequencing projects.

Hemiflagellochloris (Chlorophyceae, Chlorophyta), a new for Russian flora genus of green algae

2014 ◽  
Vol 48 ◽  
pp. 104-113
Author(s):  
A. D. Temraleeva ◽  
E. V. Mincheva ◽  
Yu. S. Bukin ◽  
M. V. Eltsov ◽  
V. A. Demkin ◽  
...  
Keyword(s):  
Green Algae ◽  
Molecular Analysis ◽  
18S Rdna ◽  
Phylogenetic Position ◽  
Rdna Gene ◽  
Algal Strain ◽  
The North ◽  
Volgograd Region ◽  
First Time ◽  
18S Rdna Gene

The genus Hemiflagellochloris Watanabe et al. was found in Russia for the first time. The algal strain was isolated from a buried solonetz in the zone of dry steppes (the north-end of Ergeni Hills, Volgograd Region). The morphology and ecology of this isolate are described. Its phylogenetic position within Chlorophyceae is determined by molecular analysis of 18S rDNA gene.

New locality records and call description of the Resplendent Shrub Frog Raorchestes resplendens (Amphibia: Anura: Rhacophoridae) from the Western Ghats, India

2020 ◽  
Vol 12 (11) ◽  
pp. 16502-16509
Author(s):  
Sandeep Das ◽  
K.P. Rajkumar ◽  
K.A. Sreejith ◽  
M. Royaltata ◽  
P.S. Easa
Keyword(s):  
Endangered Species ◽  
Western Ghats ◽  
Small Area ◽  
Grassland Ecosystem ◽  
Critically Endangered Species ◽  
Controlled Burning ◽  
New Locations ◽  
Southern Western Ghats ◽  
First Time ◽  
The Western Ghats

Abstract: The Resplendent Shrub Frog, Raorchestes resplendens Biju, Shouche, Dubois, Dutta, & Bossuyt, 2010 is a Critically Endangered species endemic to the Western Ghats and was considered to be restricted to a three-square kilometer patch atop Anamudi summit.  In this study, we report 36 new locations of the species from the Anamalai massif of the southern Western Ghats.  Niche-based prediction modelling suggests that the species is restricted to Anamalai massif.  The call description of this frog is also provided for the first time. The preferred microhabitat of the frog is Chrysopogon grass clumps in the marshy/swampy montane grassland ecosystem. Restricted to a small area with controlled burning management practiced in its habitat, R. resplendens needs immediate attention.

scholarly journals Advances on the Implementation of Circular Economy Techniques in Rural Areas in Colombia under a Sustainable Development Framework

2021 ◽  
Vol 13 (7) ◽  
pp. 3816
Author(s):  
Javier Rodrigo-Ilarri ◽  
Camilo-A. Vargas-Terranova ◽  
María-Elena Rodrigo-Clavero ◽  
Paula-A. Bustos-Castro
Keyword(s):  
Sustainable Development ◽  
Waste Management ◽  
Circular Economy ◽  
Rural Areas ◽  
Development Framework ◽  
Starting Point ◽  
Management Plans ◽  
Good Starting Point ◽  
Depressed Regions ◽  
First Time

For the first time in the scientific literature, this research shows an analysis of the implementation of circular economy techniques under sustainable development framework in six municipalities with a depressed economy in Colombia. The analysis is based on solid waste data production at a local scale, the valuation of the waste for subsequent recycling, and the identification and quantification of the variables associated with the treatment and final disposal of waste, in accordance with the Colombian regulatory framework. Waste generation data are obtained considering three different scenarios, in which a comparison between the simulated values and those established in the management plans are compared. Important differences have been identified between the waste management programs of each municipality, specifically regarding the components of waste collection, transportation and disposal, participation of environmental reclaimers, and potential use of materials. These differences are fundamentally associated with the different administrative processes considered for each individual municipality. This research is a good starting point for the development of waste management models based on circular economy techniques, through the subsequent implementation of an office tool in depressed regions such as those studied.

scholarly journals Genome-wide identification of the GATA transcription factor family and their expression patterns under temperature and salt stress in Aspergillus oryzae

AMB Express ◽  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Chunmiao Jiang ◽  
Gongbo Lv ◽  
Jinxin Ge ◽  
Bin He ◽  
Zhe Zhang ◽  
...  
Keyword(s):  
Salt Stress ◽  
Expression Patterns ◽  
Interaction Network ◽  
Protein Protein Interaction ◽  
Genome Wide ◽  
Gata Transcription Factor ◽  
Starting Point ◽  
Evolutionary Features ◽  
First Time

AbstractGATA transcription factors (TFs) are involved in the regulation of growth processes and various environmental stresses. Although GATA TFs involved in abiotic stress in plants and some fungi have been analyzed, information regarding GATA TFs in Aspergillusoryzae is extremely poor. In this study, we identified and functionally characterized seven GATA proteins from A.oryzae 3.042 genome, including a novel AoSnf5 GATA TF with 20-residue between the Cys-X2-Cys motifs which was found in Aspergillus GATA TFs for the first time. Phylogenetic analysis indicated that these seven A. oryzae GATA TFs could be classified into six subgroups. Analysis of conserved motifs demonstrated that Aspergillus GATA TFs with similar motif compositions clustered in one subgroup, suggesting that they might possess similar genetic functions, further confirming the accuracy of the phylogenetic relationship. Furthermore, the expression patterns of seven A.oryzae GATA TFs under temperature and salt stresses indicated that A. oryzae GATA TFs were mainly responsive to high temperature and high salt stress. The protein–protein interaction network of A.oryzae GATA TFs revealed certain potentially interacting proteins. The comprehensive analysis of A. oryzae GATA TFs will be beneficial for understanding their biological function and evolutionary features and provide an important starting point to further understand the role of GATA TFs in the regulation of distinct environmental conditions in A.oryzae.

The Strait of Magellan—a Gateway to New Worlds

2021 ◽  
Author(s):  
Mauricio Onetto Pavez
Keyword(s):  
Global Scale ◽  
Modern World ◽  
American Continent ◽  
The Earth ◽  
Starting Point ◽  
Strait Of Magellan ◽  
The World ◽  
The Strait Of Magellan ◽  
History Of ◽  
First Time

The year 2020 marks the five hundredth anniversary of the “discovery” of the Strait of Magellan. The unveiling of this passage between 1519 and 1522 allowed the planet to be circumnavigated for the first time in the history of humanity. All maritime routes could now be connected, and the idea of the Earth, in its geographical, cosmographic, and philosophical dimensions, gained its definitive meaning. This discovery can be considered one of the founding events of the modern world and of the process of globalization that still continues today. This new connectivity awoke an immediate interest in Europe that led to the emergence of a political consciousness of possession, domination, and territorial occupation generalized on a global scale, and the American continent was the starting point for this. This consciousness also inspired a desire for knowledge about this new form of inhabiting the world. Various fields of knowledge were redefined thanks to the new spaces and measurements produced by the discovery of the southern part of the Americas, which was recorded in books on cosmography, natural history, cartography, and manuscripts, circulating mainly between the Americas and Europe. All these processes transformed the Strait of Magellan into a geopolitical space coveted by Europeans during the 16th century. As an interoceanic connector, it was used to imagine commercial routes to the Orient and political projects that could sustain these dynamics. It was also conceived as a space to speculate on the potential wealth in the extreme south of the continent. In addition, on the Spanish side, some agents of the Crown considered it a strategic place for imperial projections and the defense of the Americas.

The enigmatic diapsid Acerosodontosaurus piveteaui (Reptilia: Neodiapsida) from the Upper Permian of Madagascar and the paraphyly of “younginiform” reptiles

2009 ◽  
Vol 46 (9) ◽  
pp. 651-661 ◽  
Author(s):  
Constanze Bickelmann ◽  
Johannes Müller ◽  
Robert R. Reisz
Keyword(s):  
Phylogenetic Analysis ◽  
Data Matrix ◽  
Upper Permian ◽  
Phylogenetic Position ◽  
Ancestral Condition ◽  
Phylogenetic Data ◽  
First Time ◽  
Evolutionary Lineages

A restudy of the Upper Permian diapsid Acerosodontosaurus piveteaui from Madagascar indicates that the bone formerly identified as the quadratojugal is a fragment of a rib. This in turn implies that, in contrast to previous studies, the lower temporal arcade must be considered incomplete and derived relative to the ancestral condition. Since the phylogenetic position of Acerosodontosaurus is poorly understood, the taxon was entered into a modified phylogenetic data matrix of diapsid reptiles, and the purported monophyly of “Younginiformes” was tested for the first time by including all potential members of the clade as separate taxa, as well as other taxa from the same deposits. The results of the phylogenetic analysis do not support the monophyly of “younginiform” reptiles. Instead, most taxa cluster unresolved at the base of Neodiapsida, a finding that has important implications for the understanding of early diapsid evolution because it suggests that early neodiapsids represent several distinct evolutionary lineages. Acerosodontosaurus and Hovasaurus do form a clade, a finding consistent with the stratigraphic age and biogeography of these taxa.

scholarly journals First comprehensive proteome analysis of lysine crotonylation in Streptococcus agalactiae, a pathogen causing meningoencephalitis in teleosts

2021 ◽  
Vol 19 (1) ◽  
Author(s):  
Xinjin Chen ◽  
Bolin Fan ◽  
Chenlong Fan ◽  
Zhongliang Wang ◽  
Eakapol Wangkahart ◽  
...  
Keyword(s):  
Streptococcus Agalactiae ◽  
Proteome Analysis ◽  
Post Translational Modifications ◽  
Sensing System ◽  
Affinity Enrichment ◽  
Single Organism ◽  
Starting Point ◽  
Zoonotic Risk ◽  
Quorum Sensing System ◽  
First Time

Abstract Backgroud Streptococcus agalactiae is a common colonizer of the rectovaginal tract and lead to infectious diseases of neonatal and non-pregnant adults, which also causes infectious disease in fish and a zoonotic risk as well. Lysine crotonylation (Kcr) is a kind of histone post-translational modifications discovered in 2011. In yeast and mammals, Kcr function as potential enhancers and promote gene expression. However, lysine crotonylation in S. agalactiae has not been studied yet. Methods In this study, the crotonylation profiling of fish pathogen, S. agalactiae was investigated by combining affinity enrichment with LC MS/MS. The Kcr modification of several selected proteins were further validated by Western blotting. Results In the present study, we conducted the proteome-wide profiling of Kcr in S. agalactiae and identified 241 Kcr sites from 675 screened proteins for the first time. Bioinformatics analysis showed that 164 sequences were matched to a total of six definitively conserved motifs, and many of them were significantly enriched in metabolic processes, cellular process, and single-organism processes. Moreover, four crotonylation modified proteins were predicted as virulence factors or to being part of the quorum sensing system PTMs on bacteria. The data are available via ProteomeXchange with identifier PXD026445. Conclusions These data provide a promising starting point for further functional research of crotonylation in bacterial virulence in S. agalactiae.

scholarly journals The Gustavia clade (Lecythidaceae) in Central America: a new record of Gustavia sessilis and a key to its species

2020 ◽  
Author(s):  
Juvenal Enrique Batista Guerra ◽  
Orlando O. Ortiz
Keyword(s):  
Endangered Species ◽  
Central America ◽  
New Record ◽  
Conservation Status ◽  
Central American ◽  
Type Specimens ◽  
Neotropical Tree ◽  
Natural Range ◽  
First Time ◽  
Conservation Of Biodiversity

Background and Aims: Gustavia sessilis is a neotropical tree, belonging to the Lecythidaceae family, until now known from the Colombian Chocó region only. In this paper, we report G. sessilis for the first time for Central America. Methods: Central American specimens of G. sessilis were collected in 2019 from the Darién Province (eastern Panama). Plant identifications were confirmed by comparing collected specimens with those identified earlier and housed in the MO, PMA, SCZ and UCH herbaria. Type specimens were examined by consulting the JSTOR Global Plants database. The estimations of the conservation status were made based on the criteria of the IUCN.Key results: The record of G. sessilis for Central America is presented, based on a collection made from eastern Panama (Darién Province). Photographs, taxonomic comments, and conservation notes are provided. Additionally, a key for the Central American Gustavia species is included.Conclusions: The distribution of G. sessilis now ranges from Bahía Piñas, Darién Province, Panama to the Condoto river, Chocó region, Colombia, highlighting the importance of the Chocó Panama-Colombia region for the conservation of biodiversity, since it could act as a natural corridor for species. Taking into account the small number of records and the restricted natural range of this species, we recommend considering G. sessilis as an endangered species.

scholarly journals First report, morphological and molecular characterization of Xiphinema elongatum and X. pachtaicum (Nematoda, Longidoridae) from Ethiopia

ZooKeys ◽  
2015 ◽  
Vol 489 ◽  
pp. 1-13 ◽  
Author(s):  
Gezahegne Damessa ◽  
Wim Bert ◽  
Frieda Decraemer
Keyword(s):  
18S Rdna ◽  
Agricultural Research ◽  
Nematode Species ◽  
Molecular Data ◽  
Geographical Information ◽  
Parasitic Nematodes ◽  
Root Tips ◽  
Complex Species ◽  
Morphometric Analyses ◽  
First Time

A total of six soil samples were collected around rhizosphere of citrus plants during 2010 from Melkassa Agricultural Research Center experimental station, Ethiopia. From these samples two most important ecto-plant parasitic nematodes of the genus Xiphinema were found and analysed. The genus Xiphinema is a large group of the phylum nematoda which constitutes more than 260 species. They are polyphagous root- ectoparasites of many crop plants and some species of this genus cause damage by direct feeding on root tips and transmit nepoviruses. The delimitation and discrimination of two species in the genus is presented, described herein as Xiphinemaelongatum and Xiphinemapachtaicum. Morphological and morphometric data were done using light microscopy and results of both species were fit within the previously described nematode species of Xiphinemaelongatum and Xiphinemapachtaicum. 18S rDNA were analysed using Bayesian inference (BI) method to reconstruct phylogenetic relationships of the studied Xiphinema sp. (KP407872Xiphinemaelongatum and KP407873Xiphinemapachtaicum) with other Xiphinema species. The 18S rDNA sequence of Xiphinemapachtaicum was alike to previously described species from the GenBank but Xiphinemaelongatum exhibited very small levels of nucleotides differences (0.4%) which might be possible intra-specific divergence. Though this region of rDNA has less resolution on complex species, its combination with morphological and morphometric analyses, suggests these species as Xiphinemaelongatum and Xiphinemapachtaicum with the GenBank accession number of KP407872 and KP407873, respectively. Short notes, morphological measurements, illustrations, and molecular data are given to these species. These species are reported for the first time from Ethiopia and it provides new geographical information of these organisms.

THE SARS-CoV-2 PANDEMIC IN BULGARIA AND THE CHALLENGES OF REAL-TIME DISTANCE LEARNING FOR TOURISM UNIVERSITY STUDENTS

2020 ◽  
Author(s):  
Ivan Obreshkov ◽  
Keyword(s):  
Distance Learning ◽  
University Students ◽  
Real Time ◽  
Full Time ◽  
Starting Point ◽  
Part Time ◽  
Time Distance ◽  
First Time ◽  
Educational Field

The severe acute respiratory syndrome coronavirus SARS-CoV-2 pandemic brought changes in various aspects of life, including educational field. The present study reveals some of the challenges related to real-time distance learning for university students majoring in tourism in Plovdiv, Bulgaria. The study includes Bulgarian and international students in full-time and part-time bachelor's and master's tourism programs, in which real-time distance education was introduced for the first time. The current study could be a starting point for improving the organization and quality of education of Tourism students, as well as for faster overcoming of related difficulties in communication with students.

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