scholarly journals Genetic Consequences of Multiple Translocations of the Banded Hare-Wallaby in Western Australia

Diversity ◽  
2020 ◽  
Vol 12 (12) ◽  
pp. 448
Author(s):  
Daniel J. White ◽  
Kym Ottewell ◽  
Peter B. S. Spencer ◽  
Michael Smith ◽  
Jeff Short ◽  
...  
Keyword(s):  
Western Australia ◽  
Allelic Diversity ◽  
Population Viability Analysis ◽  
High Survival ◽  
Mammal Species ◽  
Viability Analysis ◽  
Invasive Predators ◽  
Source Populations ◽  
Environmental Events ◽  
The Impact

Many Australian mammal species now only occur on islands and fenced mainland havens free from invasive predators. The range of one species, the banded hare-wallaby (Lagostrophus fasciatus), had contracted to two offshore islands in Western Australia. To improve survival, four conservation translocations have been attempted with mixed success, and all occurred in the absence of genetic information. Here, we genotyped seven polymorphic microsatellite markers in two source (Bernier Island and Dorre Island), two historic captive, and two translocated L. fasciatus populations to determine the impact of multiple translocations on genetic diversity. Subsequently, we used population viability analysis (PVA) and gene retention modelling to determine scenarios that will maximise demographic resilience and genetic richness of two new populations that are currently being established. One translocated population (Wadderin) has undergone a genetic bottleneck and lost 8.1% of its source population’s allelic diversity, while the other (Faure Island) may be inbred. We show that founder number is a key parameter when establishing new L. fasciatus populations and 100 founders should lead to high survival probabilities. Our modelling predicts that during periodic droughts, the recovery of source populations will be slower post-harvest, while 75% more animals—about 60 individuals—are required to retain adequate allelic diversity in the translocated population. Our approach demonstrates how genetic data coupled with simulations of stochastic environmental events can address central questions in translocation programmes.

A Retrospective Analysis on the Population Viability of the Yangtze River Dolphin or Baiji (Lipotes vexillifer)

2020 ◽  
Author(s):  
Wu Bin ◽  
Wang Weiping ◽  
Wang Haihua ◽  
He Gang
Keyword(s):  
Yangtze River ◽  
Population Analysis ◽  
Relevant Literature ◽  
Population Viability Analysis ◽  
Simulation Models ◽  
Population Viability ◽  
The Yangtze River ◽  
Viability Analysis ◽  
Functional Extinction ◽  
The Impact

Background: Lipotes vexillifer, is a functionally extinct species of freshwater dolphin commonly called as Baiji dolphin of Yanzte River, China. The dolphin is thought to be the first one of it’s kind driven to extinction due to the impact of humans. Yangtze Freshwater Dolphin Expedition carried out in the year 2006 revealed the species as functionally extinct. The présent study deals with the population viability analysis of the baiji dolphin using Vortex software and also by consulting historical materials and relevant literature to explore the possible causes of the functional extinction of the baiji in the Yangtze River. The findings are to provide guidance for the effective management of another freshwater mammal, the Yangtze finless porpoise. Methods: Population viability analysis of the baiji dolphin for various parameters were assessed using Vortex software and other published information and relevant literatures. The analysis were carried out to ascertain the possible causes of the functional extinction of the baiji in the Yangtze River. Result: Simulation models were employed to identify the reasons for extinction of Yangtze River baiji population by adopting viability retrospective method. The various parameters associated with the population analysis were included to derive logical conclusion. The minimum viable population of the Yangtze River baiji was also identified by adopting various simulation models. The present study is the first attempt to apply the 10,000-time iteration method to the baiji population survivability analysis.

The impact of fire and dogs on Koalas at Port Stephens, New South Wales, using population viability analysis

2007 ◽  
Vol 13 (3) ◽  
pp. 189 ◽  
Author(s):  
Danial Lunney ◽  
Shaan Gresser ◽  
Lisa E. O'neill ◽  
Alison Matthews ◽  
Jonathan Rhodes
Keyword(s):  
New South ◽  
Local Population ◽  
New South Wales ◽  
Population Viability Analysis ◽  
Population Viability ◽  
Phascolarctos Cinereus ◽  
Viability Analysis ◽  
South Wales ◽  
The Impact ◽  
Port Stephens

The Port Stephens Koala Phascolarctos cinereus population has been regarded as one of the strongholds for Koalas in New South Wales. This study applied population viability analysis to investigate the impact of fire and predation by dogs on the viability of the local population. The rapid decline of the modelled Koala population under basic assumptions throws the assumed security of such large populations into question. In all the modelled management scenarios, reducing mortality had more influence than any other factor. Reducing the severity and frequency of large catastrophic fires improved the probability of survival for the population, though the modelled population size still declined sharply. Any management action to improve Koala survival must be accompanied by a reduction in mortality from dog attacks. Fires and dogs will have an ever greater impact on Koala populations as coastal forests become more fragmented and isolated by urban development, and their combined control will be needed to complement land-use planning measures to address habitat loss and fragmentation.

Genetic viability of a reintroduced population of south-western common brushtail possum (Trichosurus vulpecula hypoleucus), Western Australia

2020 ◽  
Vol 26 (3) ◽  
pp. 282
Author(s):  
Lara Semple ◽  
Kym Ottewell ◽  
Colleen Sims ◽  
Henner Simianer ◽  
Margaret Byrne
Keyword(s):  
Genetic Diversity ◽  
Western Australia ◽  
Sign Test ◽  
Brushtail Possum ◽  
Trichosurus Vulpecula ◽  
Tissue Samples ◽  
Reintroduced Population ◽  
Common Brushtail Possum ◽  
Source Populations ◽  
The Impact

This study focused on a reintroduced population of south-western common brushtail possum (Trichosurus vulpecula hypoleucus) to assess genetic variability and inform future management strategies. Individuals were translocated to Matuwa Kurarra-Kurarra Indigenous Protected Area, Western Australia, from four source populations, but subsequent monitoring has indicated a 50% reduction in population size from original founder numbers in the eight years since establishment. Tissue samples from three of the four source populations and an additional four comparative sites (n=140 animals total) were analysed using 13 microsatellite loci. Inbreeding was lower and heterozygosity was higher in the translocated Matuwa population than in two of the source populations studied, highlighting the benefits of promoting outbreeding through the use of multiple source populations in translocations. However, allelic richness at Matuwa is low relative to two of the source populations, suggesting the impact of population bottlenecks on genetic diversity, which was supported by significant allele frequency mode shift and Wilcoxon rank sign test for heterozygosity excess tests for genetic bottlenecks. Despite the genetic health of the population being stronger than predicted, this population is still at risk due to environmental factors, small size and fragmentation. This is the first study to document patterns of genetic diversity and to highlight issues with translocation for this subspecies and adds to the limited literature illustrating how outbreeding can be used for conservation purposes.

Preliminary predictions of the impacts of habitat area and catastrophes on the viability of Mahogany Glider Petaurus gracilis populations

1999 ◽  
Vol 5 (1) ◽  
pp. 56 ◽  
Author(s):  
Stephen M. Jackson
Keyword(s):  
Population Size ◽  
Population Viability Analysis ◽  
Adult Mortality ◽  
Population Viability ◽  
Key Populations ◽  
Management Options ◽  
Viability Analysis ◽  
Reserve Size ◽  
The Impact ◽  
Negative Population

The population viability analysis (PVA) program VORTEX was used to examine the viability of different sized populations of the Mahogany Glider Petaurus gracilis, and to examine the impact of a one in a hundred year catastrophe (each requiring a different reserve size) of different severities on different sized populations. The PVA showed that populations up to 300 individuals (1 500 ha) have a negative population growth rate, high losses of genetic diversity and a greater than 5% chance of extinction within 100 years. Populations of 400?700 individuals (2 000?3 500 ha) showed a decreasing trend in population size suggesting they are likely to become extinct after 100 years. A population of 800 individuals (4 000 ha) was needed for the population size to stabilize. Sensitivity analysis showed adult mortality of greater than 25% to be important in decreasing the viability of populations. Populations of 400 were resistant to a one in 100 year catastrophe which had a 20% mortality and 20% decrease in reproduction. When the mortality was 70%, with 70% decrease in reproduction, a population of 1 000 still had a 12% chance of extinction. As only approximately 50% of the available habitat appears to be occupied, an area up to 8 000 ha (800 individuals) is suggested to be required to maintain viable populations of Mahogany Gliders. A number of management options are recommended including the retention of habitat, establishing corridors between key populations, and using fire to minimize rainforest expansion.

Modelling the impact of predation on reintroductions of bridled nailtail wallabies.

1995 ◽  
Vol 22 (2) ◽  
pp. 163 ◽  
Author(s):  
H McCallum ◽  
P Timmers ◽  
. Hoyle.S
Keyword(s):  
Population Viability Analysis ◽  
Population Viability ◽  
Predator Prey ◽  
Viability Analysis ◽  
Standard Population ◽  
Viable Population ◽  
Almost All ◽  
The Impact ◽  
Number Of Individuals ◽  
Simple Stochastic Model

Predation by introduced foxes and cats is generally thought to be the main reason for the poor success rate of macropod reintroductions on the Australian mainland. Predator-prey theory suggests that predation may have particularly severe impacts on very small populations, especially if a more common primary prey species is present (such as the rabbit). Thus, a sufficiently large reintroduction may overcome predation and succeed where a smaller one would fail. The minimum viable population would, however, be much larger than that predicted by standard population-viability analysis. We use a simple stochastic model based upon the bridled nailtail wallaby to explore this possibility. Even very small amounts of predation (2-4 individuals per six months) can be sufficient to cause reintroductions of up to 50 animals to fail. No clear threshold population size beyond which reintroductions will succeed is evident and, for a given mean, the probability distribution of predation has a very limited impact on the success of reintroductions. In almost all circumstances, a single reintroduction of a given size is preferable to multiple reintroductions of the same total number of individuals.

scholarly journals MetaConnect, a new platform for population viability modelling to assist decision makers in conservation and urban planning

2020 ◽  
Author(s):  
Sylvain Moulherat ◽  
Elvire Bestion ◽  
Michel Baguette ◽  
Matthieu Moulherat ◽  
Stephen C.F. Palmer ◽  
...  
Keyword(s):  
Landscape Connectivity ◽  
Population Viability Analysis ◽  
Main Tool ◽  
Biodiversity Loss ◽  
Population Viability ◽  
Decision Makers ◽  
Policy Makers ◽  
Viability Analysis ◽  
The Impact

AbstractIn a context of global change, scientists and policy-makers require tools to address the issue of biodiversity loss. Population viability analysis (PVA) has been the main tool to deal with this problem. However, the tools developed during the 90s poorly integrate recent scientific advances in landscape genetics and dispersal. We developed a flexible and modular modelling platform for PVA that addresses many of the limitations of existing software. MetaConnect is an individual-based, process-based and PVA-oriented modelling platform which could be used as a research or a decision-making tool. Here, we present the core base modelling of MetaConnect. We demonstrate its potential use through a case study illustrating the platform’s capability for performing integrated PVA including extinction probability estimation, genetic differentiation and landscape connectivity analysis. We used MetaConnect to assess the impact of infrastructure works on the natterjack toad metapopulation functioning.

scholarly journals Modeling The Fate of Sumatran Elephants in Bukit Tigapuluh Indonesia: Research Needs & Implications for Population Management

2016 ◽  
Vol 10 (1) ◽  
pp. 5 ◽  
Author(s):  
Alexander Markus Moßbrucker ◽  
Muhammad Ali Imron ◽  
Satyawan Pudyatmoko ◽  
Peter-Hinrich Pratje ◽  
Sumardi
Keyword(s):  
Inbreeding Depression ◽  
Local Population ◽  
Population Viability Analysis ◽  
Population Viability ◽  
Habitat Destruction ◽  
Parameter Uncertainties ◽  
Sensitivity Testing ◽  
Viability Analysis ◽  
Conservation Measures ◽  
The Impact

The critically endangered Sumatran elephant persists in mainly small and isolated populations that may require intensive management to be viable in the long term. Population Viability Analysis (PVA) provides the opportunity to evaluate conservation strategies and objectives prior to implementation, which can be very valuable for site managers by supporting their decision making process. This study applies PVA to a local population of Sumatran elephants roaming the Bukit Tigapuluh landscape, Sumatra, with the main goal to explore the impact of pre-selected conservation measures and population scenarios on both population growth rate and extinction probability. Sensitivity testing revealed considerable parameter uncertainties that should be addressed by targeted research projects in order to improve the predictive power of the baseline population model. Given that further habitat destruction can be prevented, containing illegal killings appears to be of highest priority among the tested conservation measures and represents a mandatory pre-condition for activities addressing inbreeding depression such as elephant translocation or the establishment of a conservation corridor.Keywords: Elephas maximus sumatranus; population viability analysis (PVA); Asian elephant; elephant conservation; Vortex AbstractGajah Sumatera yang berstatus kritis sebagian besar bertahan dalam populasi kecil dan terisolasi membutuhkan pengelolaan intensif agar dapat tetap lestari dalam jangka panjang. Analisis Viabilitas Populasi (Population Viability Analysis, PVA) berpeluang untuk digunakan sebagai sarana evaluasi atas tujuan dan strategi konservasi yang disusun sebelum implementasi, yang akan sangat bermanfaat bagi pengelola kawasan guna mendukung pengambilan keputusan. Studi ini menggunakan PVA pada populasi lokal gajah Sumatera yang menjelajahi lanskap Bukit Tigapuluh, Sumatera, dengan tujuan utama mengeksplorasi dampak atas skenario upaya konservasi dan populasi terpilih terhadap laju pertumbuhan populasi dan probabilitas kepunahan. Uji sensitivitas menunjukkan adanya ketidakpastian atas sejumlah parameter pokok yang seharusnya diteliti untuk meningkatkan kekuatan prediksi atas baseline model populasi. Mengingat kerusakan habitat yang lebih parah dapat dicegah, untuk itu upaya penangkalan pembunuhan ilegal merupakan prioritas tertinggi di antara upaya-upaya konservasi yang sudah diuji dan menjadi prasyarat wajib untuk menjawab masalah kemungkinan dampak perkawinan sedarah (inbreeding depression) seperti translokasi gajah atau membangun koridor konservasi. 

scholarly journals Can we reestablish a self-sustaining population? A case study on reintroduced Crested Ibis with population viability analysis

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Yashuai Zhang ◽  
Fang Wang ◽  
Zhenxia Cui ◽  
Min Li ◽  
Xia Li ◽  
...  
Keyword(s):  
Sex Ratio ◽  
Population Size ◽  
Carrying Capacity ◽  
Wild Population ◽  
Population Viability Analysis ◽  
Population Viability ◽  
Viability Analysis ◽  
Crested Ibis ◽  
Reintroduced Population

Abstract Background One of the most challenging tasks in wildlife conservation and management is clarifying which and how external and intrinsic factors influence wildlife demography and long-term viability. The wild population of the Crested Ibis (Nipponia nippon) has recovered to approximately 4400, and several reintroduction programs have been carried out in China, Japan and Korea. Population viability analysis on this endangered species has been limited to the wild population, showing that the long-term population growth is restricted by the carrying capacity and inbreeding. However, gaps in knowledge of the viability of the reintroduced population and its drivers in the release environment impede the identification of the most effective population-level priorities for aiding in species recovery. Methods The field monitoring data were collected from a reintroduced Crested Ibis population in Ningshan, China from 2007 to 2018. An individual-based VORTEX model (Version 10.3.5.0) was used to predict the future viability of the reintroduced population by incorporating adaptive patterns of ibis movement in relation to catastrophe frequency, mortality and sex ratio. Results The reintroduced population in Ningshan County is unlikely to go extinct in the next 50 years. The population size was estimated to be 367, and the population genetic diversity was estimated to be 0.97. Sensitivity analysis showed that population size and extinction probability were dependent on the carrying capacity and sex ratio. The carrying capacity is the main factor accounting for the population size and genetic diversity, while the sex ratio is the primary factor responsible for the population growth trend. Conclusions A viable population of the Crested Ibis can be established according to population viability analysis. Based on our results, conservation management should prioritize a balanced sex ratio, high-quality habitat and low mortality.

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