scholarly journals Divergence, Convergence and Phenotypic Diversity of Neotropical Frugivorous Bats

Diversity ◽  
2018 ◽  
Vol 10 (3) ◽  
pp. 100 ◽  
Author(s):  
Oscar Murillo-García ◽  
Maria De la vega
Keyword(s):  
Biological Diversity ◽  
Phenotypic Diversity ◽  
Morphological Evolution ◽  
Strong Association ◽  
Diverse Group ◽  
Skull Morphology ◽  
Adaptive Diversification ◽  
Phenotypic Divergence ◽  
Adaptive Radiations ◽  
Morphological Innovation

Knowing how adaptation shapes morphological evolution is fundamental to understanding the processes that promote biological diversity. However, there is a lack of empirical evidence on the effects of adaptive radiations on phenotypic diversity, which is related to processes that promote phenotypic divergence and convergence. We applied comparative methods to identify shifts in adaptive peaks and to detect divergence and convergence in skull morphology of frugivorous bats (Phyllostomidae: Stenodermatinae and Carollinae), an ecologically diverse group with strong association between skull morphology, feeding performance and diet that suggests adaptive diversification through morphological innovation. We found divergence and convergence for skull morphology. Fifteen peak shifts were found for jaws, which result in four convergent and four divergent regimes. For skull, nine peak shifts were detected that result in three convergent and three divergent regimes. Furthermore, convergence was significant and strong for skull morphology since distantly related organisms converged to the same adaptive optima. Results suggest that convergence indicates the effect of restriction on phenotypes to keep the advantages provided by the skull phenotype that played a central role in the evolution of strict frugivory in phyllostomids. We conclude that convergence has limited phenotypic diversity of functional traits related to feeding in phyllostomid frugivores.

scholarly journals Bridging the Process-Pattern Divide to Understand the Origins and Early Stages of Adaptive Radiation: A Review of Approaches With Insights From Studies of Anolis Lizards

2019 ◽  
Vol 111 (1) ◽  
pp. 33-42 ◽  
Author(s):  
James T Stroud ◽  
Jonathan B Losos
Keyword(s):  
Adaptive Radiation ◽  
Biological Diversity ◽  
Greater Antilles ◽  
Adaptive Diversification ◽  
Early Stages ◽  
Process Pattern ◽  
Alternative Approach ◽  
Adaptive Radiations ◽  
Underlying Processes ◽  
Radiation Research

Abstract Understanding the origins and early stages of diversification is one of the most elusive tasks in adaptive radiation research. Classical approaches, which aim to infer past processes from present-day patterns of biological diversity, are fraught with difficulties and assumptions. An alternative approach has been to study young clades of relatively few species, which may represent the putative early stages of adaptive radiation. However, it is difficult to predict whether those groups will ever reach the ecological and morphological disparity observed in the sorts of clades usually referred to as adaptive radiations, thereby making their utility in informing the early stages of such radiations uncertain. Caribbean Anolis lizards are a textbook example of an adaptive radiation; anoles have diversified independently on each of the 4 islands in the Greater Antilles, producing replicated radiations of phenotypically diverse species. However, the underlying processes that drove these radiations occurred 30–65 million years ago and so are unobservable, rendering major questions about how these radiations came to be difficult to tackle. What did the ancestral species of the anole radiation look like? How did new species arise? What processes drove adaptive diversification? Here, we review what we have learned about the cryptic early stages of adaptive radiation from studies of Anolis lizards, and how these studies have attempted to bridge the process-pattern divide of adaptive radiation research. Despite decades of research, however, fundamental questions linking eco-evolutionary processes to macroevolutionary patterns in anoles remain difficult to answer.

scholarly journals Morphological innovation, diversification and invasion of a new adaptive zone

2011 ◽  
Vol 279 (1734) ◽  
pp. 1797-1805 ◽  
Author(s):  
Elizabeth R. Dumont ◽  
Liliana M. Dávalos ◽  
Aaron Goldberg ◽  
Sharlene E. Santana ◽  
Katja Rex ◽  
...  
Keyword(s):  
Evolutionary Biology ◽  
Morphological Evolution ◽  
Mechanical Efficiency ◽  
Recent Common Ancestor ◽  
Skull Morphology ◽  
Ecological Opportunity ◽  
Speciation Rate ◽  
Most Recent Common Ancestor ◽  
Morphological Innovation ◽  
Adaptive Zone

How ecological opportunity relates to diversification is a central question in evolutionary biology. However, there are few empirical examples of how ecological opportunity and morphological innovation open new adaptive zones, and promote diversification. We analyse data on diet, skull morphology and bite performance, and relate these traits to diversification rates throughout the evolutionary history of an ecologically diverse family of mammals (Chiroptera: Phyllostomidae). We found a significant increase in diversification rate driven by increased speciation at the most recent common ancestor of the predominantly frugivorous subfamily Stenodermatinae. The evolution of diet was associated with skull morphology, and morphology was tightly coupled with biting performance, linking phenotype to new niches through performance. Following the increase in speciation rate, the rate of morphological evolution slowed, while the rate of evolution in diet increased. This pattern suggests that morphology stabilized, and niches within the new adaptive zone of frugivory were filled rapidly, after the evolution of a new cranial phenotype that resulted in a certain level of mechanical efficiency. The tree-wide speciation rate increased non linearly with a more frugivorous diet, and was highest at measures of skull morphology associated with morphological extremes, including the most derived Stenodermatines. These results show that a novel stenodermatine skull phenotype played a central role in the evolution of frugivory and increasing speciation within phyllostomids.

scholarly journals Gene body methylation mediates epigenetic inheritance of plant traits

2021 ◽  
Author(s):  
Zaigham Shahzad ◽  
Jonathan D. Moore ◽  
Daniel Zilberman
Keyword(s):  
Gene Expression ◽  
Flowering Time ◽  
Cytosine Methylation ◽  
Plant Traits ◽  
Phenotypic Diversity ◽  
Strong Association ◽  
Epigenetic Inheritance ◽  
Evolutionary Significance ◽  
Gene Body ◽  
Gene Body Methylation

AbstractCytosine methylation is an epigenetically heritable DNA modification common in plant and animal genes, but the functional and evolutionary significance of gene body methylation (gbM) has remained enigmatic. Here we show that gbM enhances gene expression in Arabidopsis thaliana. We also demonstrate that natural gbM variation influences drought and heat tolerance and flowering time by modulating gene expression, including that of Flowering Locus C (FLC). Notably, epigenetic variation accounts for as much trait heritability in natural populations as DNA sequence polymorphism. Furthermore, we identify gbM variation in numerous genes associated with environmental variables, including a strong association between flowering time, spring atmospheric NO2 – a by-product of fossil fuel burning – and FLC epialleles. Our study demonstrates that gbM is an important modulator of gene expression, and its natural variation fundamentally shapes phenotypic diversity in plant populations. Thus, gbM provides an epigenetic basis for adaptive evolution independent of genetic polymorphism.

scholarly journals Phenotypic Divergence In Tomato Germplasm

2020 ◽  
Vol 17 (2) ◽  
pp. 185-195
Author(s):  
MZ Ullah ◽  
L Hassan ◽  
M Samsuzzaman ◽  
MA Main
Keyword(s):  
Multivariate Analysis ◽  
Phenotypic Diversity ◽  
Gene Bank ◽  
Climatic Regions ◽  
Phenotypic Divergence ◽  
Locule Number ◽  
Fruit Pericarp ◽  
Pericarp Thickness ◽  
Clustering Pattern ◽  
Range Test

Phenotypic divergence was quantified by multivariate analysis among the 70 genotypes collected from different agro-climatic regions and was available in the gene bank of Energypac Agro Ltd., Gazipur, Bangladesh. Based on the phenotypic value of 11 characters, 70 genotypes were grouped into five clusters. The genotypes of tomato were distributed in different clusters suggesting that no association was found between geographical and phenotypic diversity. Cluster II consisted of maximum twenty three genotypes (32.86%) followed by cluster III of sixteen genotypes (22.85%). Cluster IV and Cluster V comprised of thirteen (18.57%) and ten genotypes (14.29%), respectively. Cluster I consisted of eight genotypes (11.43%). The highest intra-cluster divergence (0.061) for cluster I was invariably smaller than the lowest inter-cluster divergence between cluster IV and cluster V (2.83), thus authenticating the clustering pattern formed in this study. The intra-cluster divergence ranged from 0.007 to 0.061, whereas the inter-cluster divergence ranged from 2.83 to 8.34 between clusters IV and V and clusters III and V, respectively. The four characters that played the greatest role in differentiation were locule number per fruit, pericarp thickness, fruits per plant and days to 50% flowering. Twenty homozygous parents (15 female and five male) were selected from five clusters using range test among genotypes within cluster. From cluster I parents TM409, TM386 and TM528 and from cluster III parents TM403 and TM349 were selected as male. Parents TM356, TM361, TM368, TM371, TM377, TM384, TM422 and TM423 from cluster II; parents TM388, TM390, TM392 and TM410 from cluster IV and parents TM382, TM419 and TM360 from cluster V were selected as female. SAARC J. Agri., 17(2): 185-195 (2019)

On the role of enemies in divergence and diversification of prey: a review and synthesis

2005 ◽  
Vol 83 (7) ◽  
pp. 894-910 ◽  
Author(s):  
Steven M Vamosi
Keyword(s):  
Visual Cues ◽  
Phenotypic Diversity ◽  
Theoretical Models ◽  
Ecological Interactions ◽  
Closely Related Species ◽  
Diversification Rates ◽  
Extinction Rates ◽  
Phenotypic Divergence ◽  
Experimental Approaches

Understanding the contribution of ecological interactions to the origin and maintenance of diversity is a fundamental challenge for ecologists and evolutionary biologists, and one that is currently receiving a great deal of attention. Natural enemies (e.g., predators, parasites, and herbivores) are ubiquitous in food webs and are predicted to have significant impacts on phenotypic diversity and on speciation, and extinction rates of their prey. Spurred by the development of a theoretical framework beginning in the late 1970s, there is now a growing body of literature that addresses the effects of enemy–prey interactions on the evolution of prey. A number of theoretical models predict that enemies can produce phenotypic divergence between closely related species, even in the absence of interspecific competition for resources. Effects on diversification of prey are more variable, and enemies may either enhance or depress speciation and extinction rates of their prey. Empirical evidences from a number of study systems, notably those involving predators and prey in aquatic environments and interactions between insects and flowering plants, confirm both predictions. There is now considerable evidence for the role of enemies, especially those that are size-selective or use visual cues when identifying suitable prey, on phenotypic divergence of sympatric and allopatric taxa. Enemies may spur diversification rates in certain groups under some circumstances, and hinder diversification rates in other cases. I suggest that further research should focus on the role of enemies in diversification of prey, with significant insights likely to be the product of applying traditional experimental approaches and emerging comparative phylogenetic methods.

scholarly journals Adaptation to local ultraviolet radiation conditions among neighbouring Daphnia populations

2010 ◽  
Vol 278 (1710) ◽  
pp. 1306-1313 ◽  
Author(s):  
Brooks E. Miner ◽  
Benjamin Kerr
Keyword(s):  
Ultraviolet Radiation ◽  
Environmental Variables ◽  
Population Genetic ◽  
Phenotypic Diversity ◽  
Experimental Population ◽  
Phenotypic Divergence ◽  
Trade Offs ◽  
Adaptive Processes ◽  
Subdivided Populations ◽  
Radiation Conditions

Understanding the historical processes that generated current patterns of phenotypic diversity in nature is particularly challenging in subdivided populations. Populations often exhibit heritable genetic differences that correlate with environmental variables, but the non-independence among neighbouring populations complicates statistical inference of adaptation. To understand the relative influence of adaptive and non-adaptive processes in generating phenotypes requires joint evaluation of genetic and phenotypic divergence in an integrated and statistically appropriate analysis. We investigated phenotypic divergence, population-genetic structure and potential fitness trade-offs in populations of Daphnia melanica inhabiting neighbouring subalpine ponds of widely differing transparency to ultraviolet radiation (UVR). Using a combination of experimental, population-genetic and statistical techniques, we separated the effects of shared population ancestry and environmental variables in predicting phenotypic divergence among populations. We found that native water transparency significantly predicted divergence in phenotypes among populations even after accounting for significant population structure. This result demonstrates that environmental factors such as UVR can at least partially account for phenotypic divergence. However, a lack of evidence for a hypothesized trade-off between UVR tolerance and growth rates in the absence of UVR prevents us from ruling out the possibility that non-adaptive processes are partially responsible for phenotypic differentiation in this system.

scholarly journals Coevolution is linked with phenotypic diversification but not speciation in avian brood parasites

2015 ◽  
Vol 282 (1821) ◽  
pp. 20152056 ◽  
Author(s):  
Iliana Medina ◽  
Naomi E. Langmore
Keyword(s):  
Egg Size ◽  
Biological Diversity ◽  
Phenotypic Diversity ◽  
Arms Race ◽  
Phenotypic Evolution ◽  
Brood Parasites ◽  
Parasitic Species ◽  
Extinction Rates ◽  
Rates Of Evolution ◽  
Phenotypic Diversification

Coevolution is often invoked as an engine of biological diversity. Avian brood parasites and their hosts provide one of the best-known examples of coevolution. Brood parasites lay their eggs in the nests of other species, selecting for host defences and reciprocal counteradaptations in parasites. In theory, this arms race should promote increased rates of speciation and phenotypic evolution. Here, we use recently developed methods to test whether the three largest avian brood parasitic lineages show changes in rates of phenotypic diversity and speciation relative to non-parasitic lineages. Our results challenge the accepted paradigm, and show that there is little consistent evidence that lineages of brood parasites have higher speciation or extinction rates than non-parasitic species. However, we provide the first evidence that the evolution of brood parasitic behaviour may affect rates of evolution in morphological traits associated with parasitism. Specifically, egg size and the colour and pattern of plumage have evolved up to nine times faster in parasitic than in non-parasitic cuckoos. Moreover, cuckoo clades of parasitic species that are sympatric (and share similar host genera) exhibit higher rates of phenotypic evolution. This supports the idea that competition for hosts may be linked to the high phenotypic diversity found in parasitic cuckoos.

scholarly journals Cranial shape evolution in adaptive radiations of birds: comparative morphometrics of Darwin's finches and Hawaiian honeycreepers

2017 ◽  
Vol 372 (1713) ◽  
pp. 20150481 ◽  
Author(s):  
Masayoshi Tokita ◽  
Wataru Yano ◽  
Helen F. James ◽  
Arhat Abzhanov
Keyword(s):  
Adaptive Radiation ◽  
Molecular Mechanisms ◽  
Rapid Evolution ◽  
Oceanic Islands ◽  
Shape Variation ◽  
Skull Morphology ◽  
Darwin's Finches ◽  
Hawaiian Honeycreepers ◽  
Darwin’S Finches ◽  
Adaptive Radiations

Adaptive radiation is the rapid evolution of morphologically and ecologically diverse species from a single ancestor. The two classic examples of adaptive radiation are Darwin's finches and the Hawaiian honeycreepers, which evolved remarkable levels of adaptive cranial morphological variation. To gain new insights into the nature of their diversification, we performed comparative three-dimensional geometric morphometric analyses based on X-ray microcomputed tomography (µCT) scanning of dried cranial skeletons. We show that cranial shapes in both Hawaiian honeycreepers and Coerebinae (Darwin's finches and their close relatives) are much more diverse than in their respective outgroups, but Hawaiian honeycreepers as a group display the highest diversity and disparity of all other bird groups studied. We also report a significant contribution of allometry to skull shape variation, and distinct patterns of evolutionary change in skull morphology in the two lineages of songbirds that underwent adaptive radiation on oceanic islands. These findings help to better understand the nature of adaptive radiations in general and provide a foundation for future investigations on the developmental and molecular mechanisms underlying diversification of these morphologically distinguished groups of birds. This article is part of the themed issue ‘Evo-devo in the genomics era, and the origins of morphological diversity’.

scholarly journals Iterative adaptive radiations of fossil canids show no evidence for diversity-dependent trait evolution

2015 ◽  
Vol 112 (16) ◽  
pp. 4897-4902 ◽  
Author(s):  
Graham J. Slater
Keyword(s):  
Adaptive Radiation ◽  
Morphological Evolution ◽  
Empirical Support ◽  
Phenotypic Evolution ◽  
Ecological Opportunity ◽  
Radiation Theory ◽  
Molar Teeth ◽  
Adaptive Radiations ◽  
Adaptive Peak ◽  
Adaptive Zone

A long-standing hypothesis in adaptive radiation theory is that ecological opportunity constrains rates of phenotypic evolution, generating a burst of morphological disparity early in clade history. Empirical support for the early burst model is rare in comparative data, however. One possible reason for this lack of support is that most phylogenetic tests have focused on extant clades, neglecting information from fossil taxa. Here, I test for the expected signature of adaptive radiation using the outstanding 40-My fossil record of North American canids. Models implying time- and diversity-dependent rates of morphological evolution are strongly rejected for two ecologically important traits, body size and grinding area of the molar teeth. Instead, Ornstein–Uhlenbeck processes implying repeated, and sometimes rapid, attraction to distinct dietary adaptive peaks receive substantial support. Diversity-dependent rates of morphological evolution seem uncommon in clades, such as canids, that exhibit a pattern of replicated adaptive radiation. Instead, these clades might best be thought of as deterministic radiations in constrained Simpsonian subzones of a major adaptive zone. Support for adaptive peak models may be diagnostic of subzonal radiations. It remains to be seen whether early burst or ecological opportunity models can explain broader adaptive radiations, such as the evolution of higher taxa.

scholarly journals Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae

2020 ◽  
Author(s):  
Fernando Abad-Franch ◽  
Fernando A. Monteiro ◽  
Márcio G. Pavan ◽  
James S. Patterson ◽  
M. Dolores Bargues ◽  
...  
Keyword(s):  
Dna Sequence ◽  
Chagas Disease ◽  
Phenotypic Diversity ◽  
Phenotypic Change ◽  
Nominal Species ◽  
Sequence Analyses ◽  
Naked Eye ◽  
Phenotypic Divergence ◽  
Triatomine Bugs ◽  
Rhodnius Ecuadoriensis

AbstractBackgroundTriatomine bugs, the vectors of Chagas disease, associate with vertebrate hosts in highly diverse ecotopes. When these blood-sucking bugs adapt to new microhabitats, their phenotypes may change. Although understanding phenotypic variation is key to the study of adaptive evolution and central to phenotype-based taxonomy, the drivers of phenotypic change and diversity in triatomines remain poorly understood.Methods/FindingsWe combined a detailed phenotypic appraisal (including morphology and morphometrics) with mitochondrial cytb and nuclear ITS2 DNA-sequence analyses to study Rhodnius ecuadoriensis populations from across the species’ range. We found three major, naked-eye phenotypic variants. Southern-Andean bugs (SW Ecuador/NW Peru) from house and vertebrate-nest microhabitats are typical, light-colored, small bugs with short heads/wings. Northern-Andean bugs (W Ecuador wet-forest palms) are dark, large bugs with long heads/wings. Finally, northern-lowland bugs (coastal Ecuador dry-forest palms) are light-colored and medium-sized. Wing and (size-free) head shapes are similar across Ecuadorian populations, regardless of habitat or naked-eye phenotype, but distinct in Peruvian bugs. Bayesian phylogenetic and multispecies-coalescent DNA-sequence analyses strongly suggest that Ecuadorian and Peruvian populations are two independently-evolving lineages, with little within-lineage structuring/differentiation.ConclusionsWe report sharp naked-eye phenotypic divergence of genetically similar Ecuadorian R. ecuadoriensis (house/nest southern-Andean vs. palm-dwelling northern bugs; and palm-dwelling Andean vs. lowland); and sharp naked-eye phenotypic similarity of typical, yet genetically distinct, southern-Andean bugs from house and nest (but not palm) microhabitats (SW Ecuador vs. NW Peru). This remarkable phenotypic diversity within a single nominal species likely stems from microhabitat adaptations possibly involving predator-driven selective pressure (yielding substrate-matching camouflage coloration) and a shift from palm-crown to vertebrate-nest microhabitats (yielding smaller bodies and shorter heads and wings). These findings shed new light on the origins of phenotypic diversity in triatomines, warn against excess reliance on phenotype-based triatomine-bug taxonomy, and confirm the Triatominae as an informative model-system for the study of phenotypic change under ecological pressure.Author summaryTriatomine bugs feed on the blood of vertebrates including humans and transmit the parasite that causes Chagas disease. The bugs, of which 150+ species are known, are highly diverse in size, shape, and color. Some species look so similar that they are commonly confused, whereas a few same-species populations look so different that they were thought to be separate species. Despite the crucial role of naked-eye phenotypes in triatomine-bug identification and classification (which are essential for vector control-surveillance), the origins of this variation remain unclear. Here, we describe a striking case of phenotypic divergence, with genetically similar bugs looking very different from one another, and phenotypic convergence, with bugs from two genetically distinct populations (likely on their way to speciation) looking very similar – and all within a single nominal species, Rhodnius ecuadoriensis. Phenotypically divergent populations occupy different ecological regions (wet vs. dry) and microhabitats (palm-crowns vs. vertebrate nests), whereas convergent populations occupy man-made and nest (but not palm) microhabitats. These findings suggest that triatomines can ‘respond’ to ecological novelty by changing their external, naked-eye phenotypes as they adapt to new microhabitats. We therefore warn that phenotypic traits such as overall size or color may confound triatomine-bug species identification and classification.

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