scholarly journals Assessments of Bacterial Community Shifts in Sediments along the Headwaters of São Francisco River, Brazil

Conservation ◽  
2021 ◽  
Vol 1 (2) ◽  
pp. 91-105
Author(s):  
Marcos de Paula ◽  
Thiago Augusto Costa Costa Silva ◽  
Amanda Soriano Araújo ◽  
Gustavo Augusto Lacorte

Sustainable use of freshwater resources for human civilization needs requires the assessment and monitoring of freshwater health, and bacterial communities from riverbed sediments have been shown to be susceptible to chronic anthropogenic disturbances in freshwater ecosystems. Here, we took advantage of the occurrence of well-recognized adjacent sections from the Upper São Francisco River basin with well-recognized levels of anthropogenic activity intensity to test the applicability of sediment bacterial communities as bioindicators of impacts on freshwater ecosystems. We applied 16S amplicon sequencing to estimate the diversity and composition of bacterial communities from 12 sampling sites across the Upper São Francisco River basin, classified as being of no, low, or high intensity of anthropogenic activities, and used diversity metrics and LEfSe to compare the patterns of community structure. Our results revealed that accessed sediment environments associated with land areas with a high intensity of anthropogenic activities presented the lowest levels of community diversity, and the bacterial community compositions of these environments were significantly different from the other sampled areas. Our findings can be considered a source of evidence for the usefulness of bacterial community-based approaches as a tool for diagnosis and monitoring of ecosystem health in areas of vulnerable freshwater environments, and can even be incorporated into regular water quality programs.

1998 ◽  
Vol 41 (3) ◽  
pp. 309-314 ◽  
Author(s):  
Yoshimi Sato ◽  
Nelsy Fenerich-Verani ◽  
José Roberto Verani ◽  
Hugo Pereira Godinho ◽  
Edson Vieira Sampaio

Rhinelepis aspera is the largest Loricariidae species found in the São Francisco river basin where it is now rarely caught. Brooders kept in tanks were hypophysed with crude carp pituitary extract (CCPE). Approximately 82% of the females responded positive to the treatment. The egg was opaque, demersal, round, yellow and adhesive. Egg stripping was done at 212 hour-degrees (= 8.2 h) after application of the second dose of CCPE (water temperature = 25-26 ºC). Hatching of the larvae occurred at 1022 hour-degrees (= 42.2 h), after fertilization of the eggs (water temperature =24-25 ºC). Fertilization rate of the eggs was 72%. Absolute fecundity (AF), initial fertility (IF) and final fertility (FF) in relation to the females' body weight are expressed, respectively, by the equations: AF = - 33993 + 122308 Wt (r² = 0.88), IF = - 14823 + 58619 Wt (r² = 0.71) and FF = - 6553 + 29741 (r² = 0.61)


2015 ◽  
Vol 24 (2) ◽  
pp. 129-135 ◽  
Author(s):  
Danielle Priscilla Correia Costa ◽  
Cassandra Moraes Monteiro ◽  
Marilia Carvalho Brasil-Sato

A total of 103 specimens of Hoplias intermedius (Günther, 1864) and 86 specimens of H. malabaricus (Bloch, 1794) from the upper São Francisco River, State of Minas Gerais were collected between April 2011 and August 2013, and their parasitic fauna were investigated. Four species of Digenea were found: metacercariae of Austrodiplostomum sp., and Ithyoclinostomum sp.; and adult specimens of Phyllodistomum spatula Odhner, 1902, and Pseudosellacotyla lutzi (Freitas, 1941) Yamaguti, 1954. The prevalence of the metacercariae was higher than that of the adult digeneans of erythrinids from the upper São Francisco River as a result of piscivorous feeding habits of these adult erythrinids. The presence of metacercariae and adult digeneans indicate that they act as intermediate and definitive hosts, respectively, in their biological cycles. Hoplias intermedius is a new host for the four species of Digenea, and the São Francisco River basin is a new location for the known geographical distributions of P. spatula and P. lutzi.


PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e5508 ◽  
Author(s):  
Yan Li ◽  
Yan Kong ◽  
Dexiong Teng ◽  
Xueni Zhang ◽  
Xuemin He ◽  
...  

BackgroundRecently, researches have begun to investigate the microbial communities associated with halophytes. Both rhizobacterial community composition and the environmental drivers of community assembly have been addressed. However, few studies have explored the structure of rhizobacterial communities associated with halophytic plants that are co-occurring in arid, salinized areas.MethodsFive halophytes were selected for study: these co-occurred in saline soils in the Ebinur Lake Nature Reserve, located at the western margin of the Gurbantunggut Desert of Northwestern China. Halophyte-associated bacterial communities were sampled, and the bacterial 16S rDNA V3–V4 region amplified and sequenced using the Illumina Miseq platform. The bacterial community diversity and structure were compared between the rhizosphere and bulk soils, as well as among the rhizosphere samples. The effects of plant species identity and soil properties on the bacterial communities were also analyzed.ResultsSignificant differences were observed between the rhizosphere and bulk soil bacterial communities. Diversity was higher in the rhizosphere than in the bulk soils. Abundant taxonomic groups (from phylum to genus) in the rhizosphere were much more diverse than in bulk soils. Proteobacteria, Firmicutes, Actinobacteria, Bacteroidetes and Planctomycetes were the most abundant phyla in the rhizosphere, while Proteobacteria and Firmicutes were common in bulk soils. Overall, the bacterial community composition were not significantly differentiated between the bulk soils of the five plants, but community diversity and structure differed significantly in the rhizosphere. The diversity ofHalostachys caspica,Halocnemum strobilaceumandKalidium foliatumassociated bacterial communities was lower than that ofLimonium gmeliniiandLycium ruthenicumcommunities. Furthermore, the composition of the bacterial communities ofHalostachys caspicaandHalocnemum strobilaceumwas very different from those ofLimonium gmeliniiandLycium ruthenicum. The diversity and community structure were influenced by soil EC, pH and nutrient content (TOC, SOM, TON and AP); of these, the effects of EC on bacterial community composition were less important than those of soil nutrients.DiscussionHalophytic plant species played an important role in shaping associated rhizosphere bacterial communities. When salinity levels were constant, soil nutrients emerged as key factors structuring bacterial communities, while EC played only a minor role. Pairwise differences among the rhizobacterial communities associated with different plant species were not significant, despite some evidence of differentiation. Further studies involving more halophyte species, and individuals per species, are necessary to elucidate plant species identity effects on the rhizosphere for co-occurring halophytes.


2016 ◽  
Vol 38 (2) ◽  
pp. 15
Author(s):  
R. M. G. VIEIRA ◽  
C. P. DERECZYNSKI ◽  
S. C. CHOU ◽  
J. L. GOMES ◽  
A. C. PAIVA NETO

Author(s):  
Celso Augusto Guimarães Santos ◽  
Reginaldo Moura Brasil Neto ◽  
Richarde Marques da Silva ◽  
Jacqueline Sobral de Araújo Passos

2020 ◽  
Vol 4 (3) ◽  
pp. 225-238
Author(s):  
Kamrun Nahar ◽  
Jean-Baptiste Floc’h ◽  
Claudia Goyer ◽  
Bernie J. Zebarth ◽  
Sean Whitney

Potato cultivars susceptible to common scab were previously reported to harbor five to six times more abundant pathogenic Streptomyces spp. in the rhizosphere soils compared with tolerant cultivars. It is still unclear if the diversity of soil bacterial communities is related to the abundance of pathogenic Streptomyces spp. This study evaluated the effects of potato cultivar on the diversity of bacterial communities in three spatial locations (soil located close to the plant [SCP], in the rhizosphere soil [RS], and in the geocaulosphere soil [GS]) in 2013 and 2014. Common scab tolerant (Goldrush and Hindenburg) and susceptible cultivars (Green Mountain and Agria) were planted in a field infested with pathogenic Streptomyces spp. causing common scab. The β-diversity of the bacterial community was significantly different between years and on dates within each year according to a permutational multivariate analysis of variance. The β-diversity also varied significantly among spatial locations (i.e., SCP, RS, and GS), probably due to changes in soil properties, but did not change significantly among potato cultivars. The architecture of the bacterial network in RS in 2014 was more complex compared with 2013 with a 2.5-fold increase in the number of bacteria included according to a co-occurrence analysis. These results indicated that the soil bacterial community diversity changed temporally and spatially. However, bacterial community diversity and richness were not affected by potato cultivar, suggesting that there were no relationships between bacterial community diversity or richness and the abundance of pathogenic Streptomyces spp.


2005 ◽  
Vol 3 (3) ◽  
pp. 449-452 ◽  
Author(s):  
Orlando Moreira Filho ◽  
Paulo Andreas Buckup

During construction of the Furnas hydroelectric power dam in the upper rio Paraná basin in the early 1960s, the rio Piumhi drainage outflow was diverted into the headwaters of the São Francisco river basin. The rio Piumhi was a right bank tributary of the rio Grande, which unites with the rio Paranaíba to form the rio Paraná. The transposition allowed the entire fish fauna of the rio Piumhi and associated swamps, lakes, and tributaries to intermingle with the fish fauna of the São Francisco basin via the ribeirão Sujo, a right bank tributary of the São Francisco. The transposition of the watershed may have had a major impact on the current composition of the fish fauna of the upper rio São Francisco watershed.


Micron ◽  
2009 ◽  
Vol 40 (5-6) ◽  
pp. 552-559 ◽  
Author(s):  
Roberto Laridondo Lui ◽  
Daniel Rodrigues Blanco ◽  
Vladimir Pavan Margarido ◽  
Orlando Moreira Filho

2018 ◽  
Vol 31 (2) ◽  
pp. 336-343
Author(s):  
FÁDIA SAMARA SANTOS NASCIMENTO ◽  
VALTEMIR GONÇALVES RIBEIRO ◽  
DÉBORA COSTA BASTOS ◽  
JUCIENY FERREIRA DE SÁ ◽  
PEDRO HENRIQUE DIAS NASCIMENTO

ABSTRACT To understand the production cycle of a particular cultivar in a given region, it is necessary to obtain information related to its phenology and the accumulated degree days. The purpose of this study was to evaluate the phenological cycle of citrus species grafted onto two rootstocks and grown in the Low-Middle Region of the São Francisco River Basin, in particular with respect to accumulated degree days. The experiment was conducted using ‘Rubi’ and ‘Pera D-12’ oranges and ‘Page’ mandarins. Two rootstocks were used, namely ‘Cravo’ and ‘Volkameriano’ lemon species that were drip irrigated in the Campo Experimental de Bebedouro, an experimental field owned by Embrapa Semiárido. ‘Page’ mandarins with ‘Cravo’ or ‘Volkameriano’ rootstocks exhibited a subperiod (0-10) of 183.32 and 181.24 days, respectively. Meanwhile, ‘Pera D-12’ and ‘Rubi’ oranges with ‘Cravo’ rootstocks had values of 249.57 and 178.58 days, respectively, while those with ‘Volkameriano’ rootstocks had values of 226.35 and 200.41 days, respectively. The accumulated degree days were measured from the initial sprouting to harvesting, which took place when the fruits presented a soluble solids/titratable acidity ratio equal to or greater than 12. ‘Page’ mandarins required 2,720 degree days, whereas ‘Pera D-12’ and ‘Rubi’ oranges required approximately 3,390 and 2,280 degree days, respectively. Finally, ‘Pera D-12’ and ‘Rubi’ oranges with either rootstock presented cycles characterized as mid-season and precocious, respectively, while ‘Page’ mandarins had precocious cycles.


Author(s):  
Esdras Adriano Barbosa dos Santos ◽  
Tatijana Stosic ◽  
Ikaro Daniel de Carvalho Barreto ◽  
Laélia Campos ◽  
Antonio Samuel Alves da Silva

This work evaluated dry and rainy conditions in the subregions of the São Francisco River Basin (BHSF) using the Standardized Precipitation Index (SPI) and Markov chains. Each subregion of the BHSF has specific physical and climatic characteristics. The data was obtained from the National Water Agency (ANA), collected by four pluviometric stations (representative of each subregion), covering 46 years of data, from 1970 to 2015. The SPI was calculated for the time scales of six and twelve months and transition probabilities were obtained using the Markov chain. Transition matrices showed that, at both scales, if the climate conditions were severe drought or rainy, switching to another class would be unlikely in the short term.  Correlating this information with the probabilities of the stationary distribution, it was possible to find the regions that are most likely to be under rainy or dry weather in the future. The recurrence times calculated for the stations that belong to the semi-arid region were smaller when compared to the value of the return period of the representative station of Upper São Francisco that has higher levels of precipitation, confirming the predisposition of the semi-arid region to present greater chances of future periods of drought.


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