scholarly journals Past and Recent Effects of Livestock Activity on the Genetic Diversity and Population Structure of Native Guanaco Populations of Arid Patagonia

Animals ◽  
2021 ◽  
Vol 11 (5) ◽  
pp. 1218
Author(s):  
Andrés Mesas ◽  
Ricardo Baldi ◽  
Benito A. González ◽  
Virginia Burgi ◽  
Alexandra Chávez ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Conservation Management ◽  
Demographic History ◽  
Arid Environment ◽  
Lama Guanicoe ◽  
Patagonian Steppe ◽  
Mitochondrial Haplotypes ◽  
Natural Landscapes ◽  
Management Plans ◽  
D Loop

Extensive livestock production and urbanization entail modifications of natural landscapes, including installation of fences, development of agriculture, urbanization of natural areas, and construction of roads and infrastructure that, together, impact native fauna. Here, we evaluate the diversity and genetic structure of endemic guanacos (Lama guanicoe) of the Monte and Patagonian Steppe of central Argentina, which have been reduced and displaced by sheep ranching and other impacts of human activities. Analyses of genetic variation of microsatellite loci and d-loop revealed high levels of genetic variation and latitudinal segregation of mitochondrial haplotypes. There were indications of at least two historical populations in the Monte and the Patagonian Steppe based on shared haplotypes and shared demographic history among localities. Currently, guanacos are structured into three groups that were probably reconnected relatively recently, possibly facilitated by a reduction of sheep and livestock in recent decades and a recovery of the guanaco populations. These results provide evidence of the genetic effects of livestock activity and urbanization on wild herbivore populations, which were possibly exacerbated by an arid environment with limited productive areas. The results highlight the importance of enacting conservation management plans to ensure the persistence of ancestral and ecologically functional populations of guanacos.

scholarly journals A Genomic Perspective on the Conservation Status of the Endangered Nashville Crayfish (Faxonius shoupi)

2021 ◽  
Author(s):  
Carla Hurt ◽  
Parker Hildreth ◽  
Carl Williams
Keyword(s):  
Genetic Variation ◽  
Habitat Degradation ◽  
Demographic History ◽  
Conservation Status ◽  
Restricted Gene Flow ◽  
Mitochondrial Haplotypes ◽  
Creek Watershed ◽  
Run Off ◽  
History Of ◽  
Conservation And Management

Abstract The Nashville crayfish (Faxonius shoupi) was federally listed as an endangered species in 1986 due to its limited distribution in the Mill Creek watershed; this waterway lies in the rapidly developing Nashville basin and has experienced habitat degradation due to agricultural run-off, contamination, and urban development. Recovery efforts, including dam removal and restoration of riparian zones, have improved conditions in Mill Creek and F. shoupi has increased in numbers and recolonized extirpated stream segments. However, a history of demographic bottlenecks and restricted gene flow may have negatively impacted the long-term recovery of this species. A recently discovered population of F. shoupi in a disjunct segment of the Lower Tennessee River at the Pickwick Tailwater may provide an additional source of genetic variation. Uncertainty surrounding the origins of the Pickwick population and its taxonomic relationship to F. shoupi in Mill Creek raises questions about the conservation and management implications of this population. We used mitochondrial sequencing and SNP genotyping to assess genetic variation and connectivity of F. shoupi in the Mill Creek drainage and to investigate the taxonomy and demographic history of the newly discovered population at Pickwick. We found substantial genetic variation and evidence of connectivity for samples throughout Mill Creek for both mitochondrial and genome-wide SNPs. Our results also suggest a recently severed connection between crayfish in Pickwick and Mill Creek. Unique mitochondrial haplotypes and SNP variation in the Pickwick population highlight the need for prioritizing this population in future conservation and management plans for this species.

scholarly journals A floristic description of the Afromontane fynbos communities on Platberg, Eastern Free State, South Africa

Koedoe ◽  
2008 ◽  
Vol 50 (1) ◽  
Author(s):  
Robert F. Brand ◽  
Pieter J. Du Preez ◽  
Leslie R. Brown
Keyword(s):  
Natural Resources ◽  
Plant Communities ◽  
Conservation Management ◽  
Alien Invasive Species ◽  
Ecological Processes ◽  
The North ◽  
Shrub Community ◽  
Management Plans ◽  
Twinspan Classification

Within the Platberg area and the wider Drakensberg region, the shrinking natural resources and the threat posed to biodiversity are of concern to conservation management and require an understanding of long-term ecological processes. The vegetation of Platberg was investigated as part of an ecological survey to establish Afromontane floristic links to the Drakensberg as well as for the management of natural resources. From a TWINSPAN classification, refined by the Braun-Blanquet method, four main plant communities were identified, which were subdivided into fynbos, wetland, a woody/shrub community and grassland. A classification and description of the fynbos are presented in this article.The analysis showed the fynbos divided into two communities comprising four sub-communities and seven variants. The fynbos community had an average of 28.34 species per relevé, ranging from 14 to 54 species per sample plot. Twenty-four endemic or near-endemic Drakensberg Alpine Centre (DAC) species and 22 exotic (alien-invasive) species were recorded. Numerous floristic links with the DAC, Cape flora fynbos and grassland bioregions to the north and west were also found. The description of the fynbos plant communities can serve as a basis for the formulation of management plans for the area.

scholarly journals Climatic Refugia and Geographical Isolation Contribute to the Speciation and Genetic Divergence in Himalayan-Hengduan Tree Peonies (Paeonia delavayi and Paeonia ludlowii)

2021 ◽  
Vol 11 ◽  
Author(s):  
Yu-Juan Zhao ◽  
Gen-Shen Yin ◽  
Yue-Zhi Pan ◽  
Bo Tian ◽  
Xun Gong
Keyword(s):  
Genetic Variation ◽  
Late Quaternary ◽  
Demographic History ◽  
Nuclear Gene ◽  
Genetic Distances ◽  
Population Divergence ◽  
Widespread Species ◽  
Isolation With Migration ◽  
Isolation By Environment ◽  
Paeonia Delavayi

Himalaya and Hengduan Mountains (HHM) is a biodiversity hotspot, and very rich in endemic species. Previous phylogeographical studies proposed different hypotheses (vicariance and climate-driven speciation) in explaining diversification and the observed pattern of extant biodiversity, but it is likely that taxa are forming in this area in species-specific ways. Here, we reexplored the phylogenetic relationship and tested the corresponding hypotheses within Paeonia subsect. Delavayanae composed of one widespread species (Paeonia delavayi) and the other geographically confined species (Paeonia ludlowii). We gathered genetic variation data at three chloroplast DNA fragments and one nuclear gene from 335 individuals of 34 populations sampled from HHM. We performed a combination of population genetic summary statistics, isolation-with-migration divergence models, isolation by environment, and demographic history analyses. We found evidence for the current taxonomic treatment that P. ludlowii and P. delavayi are two different species with significant genetic differentiation. The significant isolation by environment was revealed within all sampled populations but genetic distances only explained by geographical distances within P. delavayi populations. The results of population divergence models and demographic history analyses indicated a progenitor–derivative relationship and the Late Quaternary divergence without gene flow between them. The coalescence of all sampled cpDNA haplotypes could date to the Late Miocene, and P. delavayi populations probably underwent a severe bottleneck in population size during the last glacial period. Genetic variation in Paeonia subsect. Delavayanae is associated with geographical and environmental distances. These findings point to the importance of geological and climatic changes as causes of the speciation event and lineage diversification within Paeonia subsect. Delavayanae.

Patterns of morphological and genetic variation in western Indian Ocean members of the Chaerephon 'pumilus' complex (Chiroptera: Molossidae), with the description of a new species from Madagascar

Zootaxa ◽  
2010 ◽  
Vol 2551 (1) ◽  
pp. 1 ◽  
Author(s):  
STEVEN M. GOODMAN ◽  
WAHEEDA BUCCAS ◽  
THESHNIE NAIDOO ◽  
FANJA RATRIMOMANARIVO ◽  
PETER J. TAYLOR ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Indian Ocean ◽  
Species Complex ◽  
Arabian Peninsula ◽  
Molecular Genetic ◽  
Western Indian Ocean ◽  
D Loop ◽  
Indian Ocean Island ◽  
The Individual ◽  
A New Species

The species delimitations of African, Arabian Peninsula, and western Indian Ocean island members of the Molossidae bat species complex Chaerephon pumilus remain largely unresolved. Based on genetic analyses this group is paraphyletic, with C. leucogaster nested within C. pumilus sensu lato, and the latter is composed of several distinct clades. DNA was isolated from a specimen of C. p. pumilus obtained at the type locality (Massawa, Eritrea). Although incomplete, this sequence allowed us to clearly define which clade is referable to nominate pumilus, a critical step in resolving the systematics of this species complex. Using morphological and molecular genetic (cytochrome b and D-loop sequences) characters, we establish that C. leucogaster and C. 'pumilus' on Madagascar represent two different lineages and that the Malagasy population referred to C. 'pumilus' is specifically distinct from those on Africa, the islands and mainland Africa. The population of C. pusillus from the western Seychelles atoll of Aldabra cluster with that of the Comoros, rather than Madagascar. For numerous other species of volant vertebrates (bats and birds), the origin of the Aldabra fauna is mixed between the Comoros and Madagascar (e.g., Goodman & Ranivo 2008; O'Brien et al. 2009; Pasquet et al. 2007; Warren et al. 2003). Hence, in the case of these 9-17 g Chaerephon bats, these water barriers have been associated with the isolation and subsequent differentiation of populations after successful dispersal and colonization events. In contrast, within the Comoros, there is no apparent genetic structure between with the individual islands, which are separated by 40 and 80 km, indicating that this distance is regularly traversed by these bats and giving rise to intra-archipelago panmixia of populations.

scholarly journals Prospects for a Postsecular Heritage Practice: Convergences between Posthumanism and Popular Religious Practice in Asia

Religions ◽  
2019 ◽  
Vol 10 (7) ◽  
pp. 436
Author(s):  
Denis Byrne
Keyword(s):  
Social Sciences ◽  
Southeast Asia ◽  
Conservation Management ◽  
Popular Religion ◽  
Religious Practice ◽  
New Materialism ◽  
Popular Belief ◽  
Management Plans ◽  
Humanities And Social Sciences

By failing to document popular belief in the supernatural attributes of religious sites and by drawing up conservation management plans that fail to attend to such beliefs, current heritage regimes effectively perform a secular translation of them. I argue that the posthuman turn in the humanities and social sciences, and in particular its openness to forms of agency, vibrancy and vitality in the object world, offers prospects for a kind of heritage practice newly comfortable with the vibrancy that belief in the supernatural lends to the things of popular religion. Focusing on the material heritage of popular religion in Asia—in particular in China and Southeast Asia—attitudes of devotees to the rebuilding of temples and shrines are examined. Practices of rebuilding and restoration come to be seen as a form of worship. While ontological differences between worshipers and heritage practitioners remain, it is possible to be positive about the prospects for a postsecular heritage practice precisely because the rationalist authority of established practice is so under challenge by the counter discourses of posthumanism, the new materialism, and related streams of thought.

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