scholarly journals Primitive Extracellular Lipid Components on the Surface of the Charophytic Alga Klebsormidium flaccidum and Their Possible Biosynthetic Pathways as Deduced from the Genome Sequence

2016 ◽  
Vol 7 ◽  
Author(s):  
Satoshi Kondo ◽  
Koichi Hori ◽  
Yuko Sasaki-Sekimoto ◽  
Atsuko Kobayashi ◽  
Tsubasa Kato ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Biosynthetic Pathways ◽  
Extracellular Lipid ◽  
Klebsormidium Flaccidum ◽  
Lipid Components

scholarly journals Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Huy Quang Nguyen ◽  
Nguyen Thi-Hanh Vu ◽  
Ha Hoang Chu ◽  
Son Ky Chu ◽  
Ha Hoang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

This study reports the draft genome sequence of the endophytic Streptomyces cavourensis strain YBQ59, produces the antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. The draft genome sequence comprises ∼10.2 Mb, with a GC content of 64% and 8,958 predicted protein-coding genes, of which 14 gene clusters were found to associate with antibiotic biosynthetic pathways.

scholarly journals Draft Genome Sequence of Cystobacter ferrugineus Strain Cbfe23

2017 ◽  
Vol 5 (6) ◽  
Author(s):  
Shukria Akbar ◽  
Scot E. Dowd ◽  
D. Cole Stevens
Keyword(s):  
Natural Product ◽  
Secondary Metabolism ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Content Type

ABSTRACT In an effort to explore myxobacterial natural product biosynthetic pathways, the draft genome sequence of Cystobacter ferrugineus strain Cbfe23 has been obtained. Analysis of the genome using antiSMASH suggests a multitude of unique natural product biosynthetic pathways. This genome will contribute to the investigation of secondary metabolism in other myxobacterial species.

scholarly journals Draft Genome Sequence of Paenibacillus polymyxa KF-1, an Excellent Producer of Microbicides

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Yumei Li ◽  
Qiang Li ◽  
Yamei Li ◽  
Juan Gao ◽  
Xiangyu Fan
Keyword(s):  
Antimicrobial Activity ◽  
Genome Sequence ◽  
Draft Genome ◽  
Paenibacillus Polymyxa ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Encoding Genes

We report here the draft genome sequence of Paenibacillus polymyxa KF-1, which exhibits excellent antimicrobial activity. It encodes the synthase of bacitracin, kalimantacin, bacillomycin, iturin, fusaricidin, tridecaptin, and pelgipeptin and biosynthetic pathways of antiviral curldan and levan polysaccharides. Also, a novel prophage is involved in this genome that contains endolysin-encoding genes.

scholarly journals Draft Genome Sequence of Mycolicibacterium sp. Strain 018/SC-01/001, Isolated from the Marine Sponge Iotrochota sp.

2019 ◽  
Vol 8 (42) ◽  
Author(s):  
Ji Fa Marshall Ong ◽  
Lik Tong Tan
Keyword(s):  
Genome Sequence ◽  
Marine Sponge ◽  
Marine Bacterium ◽  
Bacterial Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Bioinformatics Tool ◽  
Content Type ◽  
Singapore Strait

Here, we report the draft genome sequence of a marine bacterium, Mycolicibacterium sp. strain 018/SC-01/001, isolated from the marine sponge Iotrochota sp. collected from the Singapore Strait. The analysis of the bacterial genome using the bioinformatics tool antiSMASH 4.0.2 revealed the presence of a number of unique natural product biosynthetic pathways.

scholarly journals Draft Genome Sequence of Streptomyces mutabilis TRM45540, Isolated from a Hypersaline Soil Sample

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Xiaoxia Luo ◽  
Chuanxing Wan ◽  
Lili Zhang
Keyword(s):  
Soil Sample ◽  
Natural Product ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Bioinformatics Tool

We report here the draft genome sequence of Streptomyces mutabilis TRM45540, a strain isolated from a soil sample from Xinjiang, China. Analysis of the genome using the bioinformatics tool antiSMASH showed the presence of many unique natural-product biosynthetic pathways.

scholarly journals Draft Genome Sequence of Bacillus sp. Strain 007/AIA-02/001, Isolated from the Marine Sponge Coelocarteria singaporensis

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Ji Fa Marshall Ong ◽  
Hui Chin Goh ◽  
Lik Tong Tan
Keyword(s):  
Genome Sequence ◽  
Marine Sponge ◽  
Marine Bacterium ◽  
Bacterial Genome ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Bacillus Sp ◽  
Bioinformatics Tool ◽  
Content Type

We report the draft genome sequence of a marine bacterium, Bacillus sp. strain 007/AIA-02/001, isolated from the marine sponge Coelocarteria singaporensis, obtained from water off the coast of Singapore. The analysis of the bacterial genome using the bioinformatics tool antiSMASH 4.0.2 showed the presence of a number of unique natural product biosynthetic pathways.

scholarly journals Draft Genome Sequence of Archangium sp. Strain Cb G35

2017 ◽  
Vol 5 (8) ◽  
Author(s):  
Barbara I. Adaikpoh ◽  
Scot E. Dowd ◽  
D. Cole Stevens
Keyword(s):  
Natural Product ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways

ABSTRACT In an effort to explore myxobacterial natural product biosynthetic pathways, the draft genome sequence of Archangium sp. strain Cb G35 has been obtained. Analysis of the genome using antiSMASH predicts 49 natural product biosynthetic pathways. This genome will contribute to the investigation of myxobacterial secondary metabolite biosynthetic pathways.

scholarly journals Genome Sequence of Paenibacillus polymyxa Strain HOB6, Isolated from Hemp Seed Oil

2021 ◽  
Vol 10 (22) ◽  
Author(s):  
Mohannad Mahmoud ◽  
Suha Jabaji
Keyword(s):  
Antimicrobial Activity ◽  
Genome Sequence ◽  
Fungal Pathogens ◽  
Seed Oil ◽  
Paenibacillus Polymyxa ◽  
Nonribosomal Peptides ◽  
Biosynthetic Pathways ◽  
Hemp Seed ◽  
Content Type

Paenibacillus polymyxa strain HOB6 was isolated from hemp seed oil. The strain displays antimicrobial activity against fungal pathogens and has potential for development as a biopesticide against cannabis diseases. Its genome was sequenced and annotated, uncovering the ability to encode the biosynthetic pathways for antimicrobial lanthipeptides and nonribosomal peptides.

scholarly journals Genome Sequence of Talaromyces atroroseus, Which Produces Red Colorants for the Food Industry

2017 ◽  
Vol 5 (9) ◽  
Author(s):  
Ulf Thrane ◽  
Kasper Bøwig Rasmussen ◽  
Bent Petersen ◽  
Simon Rasmussen ◽  
Thomas Sicheritz-Pontén ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Food Industry ◽  
Draft Genome ◽  
Cell Factory ◽  
Biosynthetic Pathways ◽  
Fungal Cell ◽  
Genetic Tools

ABSTRACT Talaromyces atroroseus is a known producer of Monascus colorants suitable for the food industry. Furthermore, genetic tools have been established that facilitate elucidation and engineering of its biosynthetic pathways. Here, we report the draft genome of a potential fungal cell factory, T. atroroseus IBT 11181 (CBS 123796).

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