scholarly journals Molecular Characterization of a Novel Shell Matrix Protein With PDZ Domain From Mytilus coruscus

2020 ◽  
Vol 11 ◽  
Author(s):  
Qi Sun ◽  
Yuting Jiang ◽  
Xiaojun Yan ◽  
Meihua Fan ◽  
Xiaolin Zhang ◽  
...  
Keyword(s):  
Molecular Characterization ◽  
Matrix Protein ◽  
Pdz Domain ◽  
Mytilus Coruscus ◽  
Shell Matrix ◽  
Shell Matrix Protein

scholarly journals Characterization of a novel shell matrix protein with vWA domain from Mytilus coruscus

2020 ◽  
Vol 84 (8) ◽  
pp. 1629-1644 ◽  
Author(s):  
Qi Sun ◽  
Yuting Jiang ◽  
Meihua Fan ◽  
Xiaolin Zhang ◽  
Huanzhi Xu ◽  
...  
Keyword(s):  
Matrix Protein ◽  
Mytilus Coruscus ◽  
Shell Matrix ◽  
Shell Matrix Protein

scholarly journals Cloning and characterization of the shell matrix protein Shematrin in scallop Chlamys farreri

2014 ◽  
Vol 46 (8) ◽  
pp. 709-719 ◽  
Author(s):  
Ya Lin ◽  
Ganchu Jia ◽  
Guangrui Xu ◽  
Jingtan Su ◽  
Liping Xie ◽  
...  
Keyword(s):  
Matrix Protein ◽  
Chlamys Farreri ◽  
Shell Matrix ◽  
Shell Matrix Protein

Culture of outer epithelial cells from mantle tissue to study shell matrix protein secretion for biomineralization

2008 ◽  
Vol 333 (3) ◽  
pp. 493-501 ◽  
Author(s):  
Ningping Gong ◽  
Qi Li ◽  
Jing Huang ◽  
Zi Fang ◽  
Guiyou Zhang ◽  
...  
Keyword(s):  
Epithelial Cells ◽  
Protein Secretion ◽  
Matrix Protein ◽  
Mantle Tissue ◽  
Shell Matrix ◽  
Shell Matrix Protein

A Comparative Study of the Shell Matrix Protein Aspein in Pterioid Bivalves

2012 ◽  
Vol 75 (1-2) ◽  
pp. 11-18 ◽  
Author(s):  
Yukinobu Isowa ◽  
Isao Sarashina ◽  
Davin H. E. Setiamarga ◽  
Kazuyoshi Endo
Keyword(s):  
Comparative Study ◽  
Matrix Protein ◽  
Shell Matrix ◽  
Shell Matrix Protein

Molecular characterization of a novel antimicrobial peptide from Mytilus coruscus

2013 ◽  
Vol 34 (2) ◽  
pp. 610-616 ◽  
Author(s):  
Zhi Liao ◽  
Xin-chao Wang ◽  
Hui-hui Liu ◽  
Mei-hua Fan ◽  
Jing-jing Sun ◽  
...  
Keyword(s):  
Antimicrobial Peptide ◽  
Molecular Characterization ◽  
Mytilus Coruscus

scholarly journals ProminTools: shedding light on proteins of unknown function in biomineralization with user friendly tools illustrated using mollusc shell matrix protein sequences

PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e9852
Author(s):  
Alastair W. Skeffington ◽  
Andreas Donath
Keyword(s):  
Unknown Function ◽  
Matrix Protein ◽  
Protein Sequences ◽  
Data Set ◽  
Shell Matrix ◽  
Large Numbers ◽  
Shell Matrix Protein ◽  
Starting Point ◽  
Data Tables ◽  
User Friendly

Biominerals are crucial to the fitness of many organism and studies of the mechanisms of biomineralization are driving research into novel materials. Biomineralization is generally controlled by a matrix of organic molecules including proteins, so proteomic studies of biominerals are important for understanding biomineralization mechanisms. Many such studies identify large numbers of proteins of unknown function, which are often of low sequence complexity and biased in their amino acid composition. A lack of user-friendly tools to find patterns in such sequences and robustly analyse their statistical properties relative to the background proteome means that they are often neglected in follow-up studies. Here we present ProminTools, a user-friendly package for comparison of two sets of protein sequences in terms of their global properties and motif content. Outputs include data tables, graphical summaries in an html file and an R-script as a starting point for data-set specific visualizations. We demonstrate the utility of ProminTools using a previously published shell matrix proteome of the giant limpet Lottia gigantea.

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