scholarly journals The Distribution of Bathyarchaeota in Surface Sediments of the Pearl River Estuary Along Salinity Gradient

2020 ◽  
Vol 11 ◽  
Author(s):  
Dayu Zou ◽  
Jie Pan ◽  
Zongbao Liu ◽  
Chuanlun Zhang ◽  
Hongbin Liu ◽  
...  
2010 ◽  
Vol 7 (2) ◽  
pp. 2889-2926 ◽  
Author(s):  
B. He ◽  
M. Dai ◽  
W. Huang ◽  
Q. Liu ◽  
H. Chen ◽  
...  

Abstract. Organic matter in surface sediments from the upper reach of the Pearl River Estuary and Lingdingyang Bay, as well as the adjacent northern South China Sea shelf was characterized by a variety of techniques, including elemental (C and N), stable carbon isotopic (δ 13C) composition, as well as molecular-level analyses. Total organic carbon (TOC) content was 1.61±1.20% in the upper reach down to 1.00±0.22% in Lingdingyang Bay and to 0.80±0.10% on the inner shelf and 0.58±0.06% on the outer shelf. δ13C values ranged from −25.11‰ to −21.28‰ across the studied area, with a trend of enrichment seaward. The spatial trend in C/N ratios mirrored that of δ13C, with a substantial decrease in C/N ratio from 10.9±1.3 in the Lingdingyang Bay surface sediments to 6.5±0.09 in the outer shelf surface sediments. Total carbohydrate yields ranged from 22.1 to 26.7 mg (100 mg OC)−1, and typically followed TOC concentrations in the estuarine and shelf sediments, suggesting that the relative abundance of total carbohydrate was fairly constant in TOC. Total neutral sugars as detected by the nine major monosaccharides (lyxose, rhamnose, ribose, arabinose, fucose, xylose, galactose, mannose, and glucose) yielded between 4.0 and 18.6 mg (100 mg OC)−1 in the same sediments, suggesting that a significant amount of carbohydrates were not neutral aldoses. The bulk organic matter properties, isotopic composition and C/N ratios, combined with molecular-level carbohydrate compositions were used to assess the sources and accumulation of terrestrial organic matter in the Pearl River Estuary and the adjacent northern South China Sea shelf. Results showed a mixture of terrestrial riverine organic carbon with in situ phytoplankton organic carbon in the areas studied. Using a two end-member mixing model based on δ13C values and C/N ratios, we estimated that the terrestrial organic carbon contribution to the surface sediment TOC was ca. 57±13% for Lingdingyang Bay, 19±2% for the inner shelf, which decreased further to 4.3±0.5% on the outer shelf. The molecular composition of the carbohydrate in surface sediments also suggested that the inner estuary was rich in terrestrial-derived carbohydrates but that the contribution of terrestrial-derived carbohydrates decreased offshore. Terrestrial organic carbon accumulation flux was estimated as 1.37±0.92×1011 g yr−1 in Lingdingyang Bay, which accounted for 37±25% of the terrestrial organic carbon transported to the Bay. The burial efficiency of terrestrial organic matter was markedly lower than that of suspended particulate substance (~71%) suggesting that the riverine POC undergoes significant degradation and replacement during transportation through the estuary.


Water ◽  
2020 ◽  
Vol 12 (11) ◽  
pp. 3245
Author(s):  
Lixia Niu ◽  
Pieter van Gelder ◽  
Xiangxin Luo ◽  
Huayang Cai ◽  
Tao Zhang ◽  
...  

The Pearl River estuary is an ecologically dynamic region located in southern China that experiences strong gradients in its biogeochemical properties. This study examined the seasonality of nutrient dynamics, identified related environmental responses, and evaluated how river discharge regulated nutrient sink and source. The field investigation showed significant differences of dissolved nutrients with seasons and three zones of the estuary regarding the estuarine characteristics. Spatially, nutrients exhibited a clear decreasing trend along the salinity gradient; temporally, their levels were obviously higher in summer than other seasons. The aquatic environment was overall eutrophic, as a result of increased fluxes of nitrogen and silicate. This estuary was thus highly sensitive to nutrient enrichment and related pollution of eutrophication. River discharge, oceanic current, and atmospheric deposition distinctly influenced the nutrient status. These factors accordingly may influence phytoplankton that are of importance in coastal ecosystems. Phytoplankton (in terms of chlorophyll) was potentially phosphate limited, which then more frequently resulted in nutrient pollution and blooms. Additionally, the nutrient sources were implied according to the cause–effect chains between nutrients, hydrology, and chlorophyll, identified by the PCA-generated quantification. Nitrogen was constrained by marine-riverine waters and their mutual increase-decline trend, and a new source was supplemented along the transport from river to sea, while a different source of terrestrial emission from coastal cities contributed to phosphate greatly.


2021 ◽  
Vol 8 ◽  
Author(s):  
Li Ma ◽  
Shangjin Tan ◽  
Hongbin Liu ◽  
Shuh-Ji Kao ◽  
Minhan Dai ◽  
...  

To distinguish between the distribution and activity of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) in the Pearl River estuary (PRE), we investigated the DNA- and cDNA-based β-proteobacterial and archaeal amoA genes on three size-fractionated particles of >3.0 μm, 0.45–3.0 μm, and 0.22–0.45 μm. Results showed that AOB were more abundant in the freshwater with high concentrations of ammonium (NH4+) and low dissolved oxygen, whereas AOA were dominant in the NH4+-depleted seawater and sensitive to temperature. Obvious shifts in ammonia-oxidizing communities were found along the salinity gradient in the PRE. AOB clearly presented a particle-associated nature, as evidenced by higher relative abundance of amoA genes attached to the large particles (>3.0 μm) and their transcripts exclusively detected on this fraction. Moreover, higher transcriptional activity (indicated by the cDNA/DNA ratio) of AOB on the large particles, suggesting AOB were actively involved in ammonia oxidation despite their lower abundance in the mid- and lower estuarine regions. In contrast, AOA exhibited higher transcriptional activity on the 0.45–3.0 μm and 0.22–0.45 μm particles, implying the free-living strategy of these microbes. Together, these findings from field observations provide useful information on the ecological strategies of ammonia-oxidizing communities in response to different environmental conditions.


2010 ◽  
Vol 7 (10) ◽  
pp. 3343-3362 ◽  
Author(s):  
B. He ◽  
M. Dai ◽  
W. Huang ◽  
Q. Liu ◽  
H. Chen ◽  
...  

Abstract. Organic matter in surface sediments from the upper reach of the Pearl River Estuary and Lingdingyang Bay, as well as the adjacent northern South China Sea shelf was characterized using a variety of techniques, including elemental (C and N) ratio, bulk stable organic carbon isotopic composition (δ13C), and carbohydrate composition analyses. Total organic carbon (TOC) content was 1.21±0.45% in the upper reach, down to 1.00±0.22% in Lingdingyang Bay and to 0.80±0.10% on the inner shelf and 0.58±0.06% on the outer shelf. δ13C values ranged from −25.1‰ to −21.3‰ in Lingdingyang Bay and the South China Sea shelf, with a trend of enrichment seawards. The spatial trend in C/N ratios mirrored that of δ13C, with a substantial decrease in C/N ratio offshore. Total carbohydrate yields ranged from 22.1 to 26.7 mg (100 mg OC)−1, and typically followed TOC concentrations in the estuarine and shelf sediments. Total neutral sugars, as detected by the nine major monosaccharides (lyxose, rhamnose, ribose, arabinose, fucose, xylose, galactose, mannose, and glucose), were between 4.0 and 18.6 mg (100 mg OC)−1 in the same sediments, suggesting that significant amounts of carbohydrates were not neutral aldoses. Using a two end-member mixing model based on δ13C values and C/N ratios, we estimated that the terrestrial organic carbon contribution to the surface sediment TOC was ca. 78±11% for Lingdingyang Bay, 34±4% for the inner shelf, and 5.5±1% for the outer shelf. The molecular composition of the carbohydrate in the surface sediments also suggested that the inner estuary was rich in terrestrially derived carbohydrates but that their contribution decreased offshore. A relatively high abundance of deoxyhexoses in the estuary and shelf indicated a considerable bacterial source of these carbohydrates, implying that sediment organic matter had undergone extensive degradation and/or transformation during transport. Sediment budget based on calculated regional accumulation rates showed that only ~50% of the influxes of terrestrial organic carbon were accumulated in the estuary. This relatively low accumulation efficiency of terrestrial organic matter as compared to the total suspended solids (accumulation efficiency ~73%) suggested significant degradation of the terrestrial organic carbon within the estuarine system after its discharge from the river. This study demonstrated that the combination of the bulk organic matter properties together with the isotopic composition and molecular-level carbohydrate compositions can be an efficient way to track down the source and fate of organic matter in highly dynamic estuarine and coastal systems. The predominance of terrestrially originated organic matter in the sediment and its generally low accumulation efficiency within the estuary is not surprising, and yet it may have important implications in light of the heavy anthropogenic discharges into the Pearl River Estuary during the past thirty years.


2020 ◽  
Vol 27 (10) ◽  
pp. 10925-10938 ◽  
Author(s):  
Lixia Niu ◽  
Qingshu Yang ◽  
Pieter van Gelder ◽  
Danna Zeng ◽  
Huayang Cai ◽  
...  

2013 ◽  
Vol 64 (8) ◽  
pp. 692 ◽  
Author(s):  
Xia Zhang ◽  
Zhen Shi ◽  
Feng Ye ◽  
Yanyi Zeng ◽  
Xiaoping Huang

Abundance and distribution characteristics of three picophytoplankton groups (Synechococcus, Prochlorococcus and picoeukaryotes), identified by flow cytometer, and two types of picocyanobacteria (phycoerythrin and phycocyanin-rich strains), determined by epifluorescence microscope, were assessed in three contrasting periods in the Pearl River Estuary, South China. The average abundance of picophytoplankon and picocyanobacteria was 104 cells mL–1 in the two summer observations and 103 cells mL–1 in winter. Low cell density in the cold season was probably due to high turbidity and low water temperature. Prochlorococcus was detected within the estuarine plume in the summer investigations and was undetectable in the winter. Higher abundance and the further upstream occurrence of Prochlorococcus in the summer of 2011 were mainly associated with extreme low river flows. We presumed that Prochlorococcus abundance and distribution range were balanced by river discharge and saline-water intrusion. Synechococcus was the dominant group in the inner estuary. Similar to Prochlorococcus, Synechococcus distribution was related with freshwater inflow. The river inflow exerted strong limitation on Synechococcus and Prochlorococcus, with this effect weakening along the salinity gradient. Picoeukaryotes were the least abundant category among picophytoplankton and showed a different distribution pattern from that of Synechococcus and Prochlorococcus. For picocyanobacteria, there was a clear spatial gradient with phycocyanin-rich strains dominant in the upper estuary, and phycocyanin-rich and phycoerythrin-rich cells dominant downstream. A significant negative correlation was observed between phycocyanin-rich cells to phycoerythrin-rich cells ratio and salinity.


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