scholarly journals Machine Learning Approaches for Epidemiological Investigations of Food-Borne Disease Outbreaks

2019 ◽  
Vol 10 ◽  
Author(s):  
Baiba Vilne ◽  
Irēna Meistere ◽  
Lelde Grantiņa-Ieviņa ◽  
Juris Ķibilds
Computers ◽  
2021 ◽  
Vol 10 (3) ◽  
pp. 32
Author(s):  
Moritz Kulessa ◽  
Eneldo Loza Mencía ◽  
Johannes Fürnkranz

Monitoring the development of infectious diseases is of great importance for the prevention of major outbreaks. Syndromic surveillance aims at developing algorithms which can detect outbreaks as early as possible by monitoring data sources which allow to capture the occurrences of a certain disease. Recent research mainly concentrates on the surveillance of specific, known diseases, putting the focus on the definition of the disease pattern under surveillance. Until now, only little effort has been devoted to what we call non-specific syndromic surveillance, i.e., the use of all available data for detecting any kind of infectious disease outbreaks. In this work, we give an overview of non-specific syndromic surveillance from the perspective of machine learning and propose a unified framework based on global and local modeling techniques. We also present a set of statistical modeling techniques which have not been used in a local modeling context before and can serve as benchmarks for the more elaborate machine learning approaches. In an experimental comparison of different approaches to non-specific syndromic surveillance we found that these simple statistical techniques already achieve competitive results and sometimes even outperform more elaborate approaches. In particular, applying common syndromic surveillance methods in a non-specific setting seems to be promising.


2019 ◽  
Vol 70 (3) ◽  
pp. 214-224
Author(s):  
Bui Ngoc Dung ◽  
Manh Dzung Lai ◽  
Tran Vu Hieu ◽  
Nguyen Binh T. H.

Video surveillance is emerging research field of intelligent transport systems. This paper presents some techniques which use machine learning and computer vision in vehicles detection and tracking. Firstly the machine learning approaches using Haar-like features and Ada-Boost algorithm for vehicle detection are presented. Secondly approaches to detect vehicles using the background subtraction method based on Gaussian Mixture Model and to track vehicles using optical flow and multiple Kalman filters were given. The method takes advantages of distinguish and tracking multiple vehicles individually. The experimental results demonstrate high accurately of the method.


2017 ◽  
Author(s):  
Sabrina Jaeger ◽  
Simone Fulle ◽  
Samo Turk

Inspired by natural language processing techniques we here introduce Mol2vec which is an unsupervised machine learning approach to learn vector representations of molecular substructures. Similarly, to the Word2vec models where vectors of closely related words are in close proximity in the vector space, Mol2vec learns vector representations of molecular substructures that are pointing in similar directions for chemically related substructures. Compounds can finally be encoded as vectors by summing up vectors of the individual substructures and, for instance, feed into supervised machine learning approaches to predict compound properties. The underlying substructure vector embeddings are obtained by training an unsupervised machine learning approach on a so-called corpus of compounds that consists of all available chemical matter. The resulting Mol2vec model is pre-trained once, yields dense vector representations and overcomes drawbacks of common compound feature representations such as sparseness and bit collisions. The prediction capabilities are demonstrated on several compound property and bioactivity data sets and compared with results obtained for Morgan fingerprints as reference compound representation. Mol2vec can be easily combined with ProtVec, which employs the same Word2vec concept on protein sequences, resulting in a proteochemometric approach that is alignment independent and can be thus also easily used for proteins with low sequence similarities.


2019 ◽  
Author(s):  
Oskar Flygare ◽  
Jesper Enander ◽  
Erik Andersson ◽  
Brjánn Ljótsson ◽  
Volen Z Ivanov ◽  
...  

**Background:** Previous attempts to identify predictors of treatment outcomes in body dysmorphic disorder (BDD) have yielded inconsistent findings. One way to increase precision and clinical utility could be to use machine learning methods, which can incorporate multiple non-linear associations in prediction models. **Methods:** This study used a random forests machine learning approach to test if it is possible to reliably predict remission from BDD in a sample of 88 individuals that had received internet-delivered cognitive behavioral therapy for BDD. The random forest models were compared to traditional logistic regression analyses. **Results:** Random forests correctly identified 78% of participants as remitters or non-remitters at post-treatment. The accuracy of prediction was lower in subsequent follow-ups (68%, 66% and 61% correctly classified at 3-, 12- and 24-month follow-ups, respectively). Depressive symptoms, treatment credibility, working alliance, and initial severity of BDD were among the most important predictors at the beginning of treatment. By contrast, the logistic regression models did not identify consistent and strong predictors of remission from BDD. **Conclusions:** The results provide initial support for the clinical utility of machine learning approaches in the prediction of outcomes of patients with BDD. **Trial registration:** ClinicalTrials.gov ID: NCT02010619.


2019 ◽  
Author(s):  
Debasree Mitra ◽  
Arghya Bhowmic ◽  
Himanshu Singh ◽  
Dibya Mondal ◽  
Khwaja Mohiuddin Ansari ◽  
...  

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