scholarly journals Whole Genome Sequence Analysis Reveals Lower Diversity and Frequency of Acquired Antimicrobial Resistance (AMR) Genes in E. coli From Dairy Herds Compared With Human Isolates From the Same Region of Central Zambia

2019 ◽  
Vol 10 ◽  
Author(s):  
Geoffrey Mainda ◽  
Nadejda Lupolova ◽  
Linda Sikakwa ◽  
Emily Richardson ◽  
Paul R. Bessell ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Dairy Herds ◽  
Whole Genome ◽  
Genome Sequence Analysis ◽  
E Coli

scholarly journals Whole genome sequence analysis of Shigella from Malawi identifies fluoroquinolone resistance

2021 ◽  
Vol 7 (5) ◽  
Author(s):  
George E. Stenhouse ◽  
Khuzwayo C. Jere ◽  
Chikondi Peno ◽  
Rebecca J. Bengtsson ◽  
End Chinyama ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Fluoroquinolone Resistance ◽  
Whole Genome ◽  
Genome Sequence Analysis ◽  
Content Type ◽  
Link Type ◽  
Global Priority

Increasing antimicrobial resistance and limited alternative treatments have led to fluoroquinolone-resistant Shigella strain inclusion on the WHO global priority pathogens list. In this study we characterized multiple Shigella isolates from Malawi with whole genome sequence analysis, identifying the acquirable fluoroquinolone resistance determinant qnrS1.

scholarly journals Whole genome sequence analysis of Shigella from Malawi identifies fluoroquinolone resistance

2020 ◽  
Author(s):  
George E. Stenhouse ◽  
Khuzwayo C. Jere ◽  
Chikondi Peno ◽  
Rebecca J. Bengtsson ◽  
End Chinyama ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Antimicrobial Resistance ◽  
Genome Sequence ◽  
Resistance Determinant ◽  
Whole Genome Sequence ◽  
Fluoroquinolone Resistance ◽  
Whole Genome ◽  
Alternative Treatments ◽  
Genome Sequence Analysis ◽  
Global Priority

AbstractIncreasing antimicrobial resistance and limited alternative treatments led to fluoroquinolone resistant Shigella strain inclusion on the WHO global priority pathogens list. In this study we characterised multiple Shigella isolates from Malawi with whole genome sequence analysis, identifying the acquirable fluoroquinolone resistance determinant qnrS1.

scholarly journals Recurrent Mycobacterium chelonae Skin Infection Unmasked as Factitious Disorder Using Bacterial Whole Genome Sequence Analysis

2020 ◽  
Vol 7 (11) ◽  
Author(s):  
Sarah Flohr ◽  
Alban Ramette ◽  
Philipp K A Agyeman ◽  
Andrea Duppenthaler ◽  
Cordula Scherer ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Genome Sequence ◽  
Surgical Therapy ◽  
Skin Infection ◽  
Whole Genome Sequence ◽  
Factitious Disorder ◽  
Whole Genome ◽  
Mycobacterium Chelonae ◽  
Genome Sequence Analysis ◽  
Adequate Therapy

Abstract Mycobacterium chelonae infections usually resolve with adequate therapy. We report the case of an adolescent with a chronic and progressive M chelonae infection refractory to combined antimicrobial and surgical therapy. Whole genome sequence analysis of consecutive isolates distinguished reinfection from recurrence and contributed to the diagnosis of a factitious disorder.

scholarly journals Application of whole genome sequence analysis to the study of Mycobacterium tuberculosis in Nunavut, Canada

PLoS ONE ◽  
2017 ◽  
Vol 12 (10) ◽  
pp. e0185656 ◽  
Author(s):  
Andrea D. Tyler ◽  
Elaine Randell ◽  
Maureen Baikie ◽  
Kym Antonation ◽  
Debra Janella ◽  
...  
Keyword(s):  
Mycobacterium Tuberculosis ◽  
Sequence Analysis ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Genome Sequence Analysis
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