scholarly journals A Survey of Culturable Fungal Endophytes From Festuca rubra subsp. pruinosa, a Grass From Marine Cliffs, Reveals a Core Microbiome

2019 ◽  
Vol 9 ◽  
Author(s):  
Eric Pereira ◽  
Beatriz R. Vázquez de Aldana ◽  
Leticia San Emeterio ◽  
Iñigo Zabalgogeazcoa
Botany ◽  
2015 ◽  
Vol 93 (4) ◽  
pp. 233-241 ◽  
Author(s):  
James S. Santangelo ◽  
Nash E. Turley ◽  
Marc T.J. Johnson

Plant – fungal endophyte interactions are common in nature and they can shape the ecology of plants. Vertically transmitted endophytes are hypothesized to serve as mutualists, protecting plants from herbivores. If this hypothesis is true, then we expect endophytes to be most abundant in the presence of herbivores and least abundant in their absence, assuming endophytes incur a cost to their host. We tested this prediction by studying the effects of intense rabbit (Oryctolagus cuniculus Linnaeus) grazing on grass–endophyte interactions at Silwood Park, UK. We examined seeds of red fescue (Festuca rubra L.) collected from 15 natural populations that were protected from rabbits for 0.3–21 years. Contrary to our prediction, the mean proportion of seeds with endophytes increased 1.84×, from 0.45 to 0.83, following 21 years of rabbit exclusion. To better understand the mechanisms driving this increase in frequency, we conducted a fully factorial greenhouse experiment where we manipulated the presence or absence of endophyte infection, intraspecific competition, and simulated grazing on F. rubra plants. In both damaged and undamaged treatments, infected plants produced approximately twice as much biomass as uninfected plants, and endophytes did not influence tolerance to herbivory. These results suggest that endophytes directly change plant growth but not compensatory responses to damage. In the absence of competitors, infected plants produced 2.17× more biomass than uninfected plants, whereas in the presence of competitors, infected plants produced only 1.55× more biomass than uninfected plants. This difference suggests that intraspecific competition might lessen the benefits of endophyte infection. Our results do not support the defensive mutualism hypothesis, but instead suggest that endophyte-induced plant growth is important in shaping the costs and benefits of endophytes in our system.


2017 ◽  
Author(s):  
Dan Thomas ◽  
Roo Vandegrift ◽  
Yu-Ming Ju ◽  
Monica Hsieh ◽  
Bitty Roy

AbstractFungal endophytes of plants are ubiquitous and important to host plant health. Despite their ecological importance, landscape-level patterns of microbial communities in plant hosts are not well-characterized. Fungal wood-inhabiting and foliar endophyte communities from multiple tree hosts were sampled at multiple spatial scales across a 25 ha subtropical research plot in northern Taiwan, using culture-free, community DNA amplicon sequencing methods. Fungal endophyte communities were distinct between leaves and wood, but the mycobiomes were highly variable across and within tree species. Of the variance that could be explained, host tree species was the most important driver of mycobiome community-composition. Within a single tree species, “core” mycobiomes were characterized using cooccurrence analysis. These core groups of endophytes in leaves and wood show divergent spatial patterns. For wood endophytes, a more consistent, “minimal” core mycobiome coexisted with the host across the extent of the study. For leaf endophytes, the core fungi resembled a more dynamic, “gradient” model of the core microbiome, changing across the topography and distance of the study.


2011 ◽  
Vol 62 (11) ◽  
pp. 1010 ◽  
Author(s):  
P. E. Gundel ◽  
I. Zabalgogeazcoa ◽  
B. R. Vázquez de Aldana

In diverse natural habitats of Europe, plants of Festuca rubra are commonly infected by the fungal endophyte Epichloë festucae. Under several circumstances, the association between the grass and the fungus has been shown to be mutualistic. Here, we conducted an experiment to study the differences in seed germination and mortality between infected (E+) and endophyte-free plants (E–) at different temperatures (12 and 25°C) and water potentials (0 and –0.5 MPa). Three half-sib lines of F. rubra, each composed of E+ and E– seeds, and derived from infected plants from semiarid grasslands were used. Although the endophyte effect depended on the incubation condition, germination percentage was significantly greater for E– (52%) than for E+ seeds (41%). Seed germination was more inhibited by the low water potential (75 v. 24% for –0.5 and 0.0 MPa, respectively), than by the high temperature (64 v. 35% for 25 and 12°C, respectively). However, mortality was highly dependent on the interaction between plant genotype and endophyte, and between temperature and water condition. It is remarkable that while highly dependent on the host genotype, there was a clear effect of endophyte increasing seed survival, especially in those treatments that were unfavourable for germination. For example, in the more restrictive treatment (25°C and –0.5 MPa), seed survival was on average, 44 and 39% for E+ and E–, respectively. In general, the endophyte affected seed characteristics of F. rubra by reducing the percentage of germination, but simultaneously increasing seed survival.


2019 ◽  
Vol 7 (11) ◽  
pp. 567
Author(s):  
Wang ◽  
Clarke ◽  
Belanger

Many cool-season grasses have symbiotic relationships with Epichloë (Ascomycota, Clavicipitaceae) fungal endophytes that inhabit the intercellular spaces of the above-ground parts of the host plants. The presence of the Epichloë endophytes is generally beneficial to the hosts due to enhanced tolerance to biotic and abiotic stresses conferred by the endophytes. Many Epichloë spp. are asexual, and those infections always remain asymptomatic. However, some Epichloë spp. have a sexual stage and produce a macroscopic fruiting body, a stroma, that envelops the developing inflorescence causing a syndrome termed “choke disease”. Here, we report a fungal and plant gene expression analysis of choke stroma tissue and asymptomatic inflorescence tissue of Epichloë festucae-infected strong creeping red fescue (Festuca rubra subsp. rubra). Hundreds of fungal genes and over 10% of the plant genes were differentially expressed when comparing the two tissue types. The differentially expressed fungal genes in the choke stroma tissue indicated a change in carbohydrate and lipid metabolism, as well as a change in expression of numerous genes for candidate effector proteins. Plant stress-related genes were up-regulated in the stroma tissue, suggesting the plant host was responding to the epiphytic stage of E. festucae as a pathogen.


2013 ◽  
Vol 60 (1) ◽  
pp. 25-32 ◽  
Author(s):  
Iñigo Zabalgogeazcoa ◽  
Pedro E. Gundel ◽  
Marjo Helander ◽  
Kari Saikkonen

2020 ◽  
Vol 8 (3) ◽  
pp. 405 ◽  
Author(s):  
Franziska Wemheuer ◽  
Dirk Berkelmann ◽  
Bernd Wemheuer ◽  
Rolf Daniel ◽  
Stefan Vidal ◽  
...  

Cacao (Theobroma cacao L.) is one of the most economically important crops worldwide. Despite the important role of endophytes for plant growth and health, very little is known about the effect of agroforestry management systems on the endophyte communities of T. cacao. To close this knowledge gap, we investigated the diversity, community composition, and function of bacterial and fungal endophytes in the leaves of T. cacao trees growing in five major cacao-growing regions in the central region of Cameroon using DNA metabarcoding. Fungal but not bacterial alpha diversity measures differed significantly between the agroforestry management systems. Interestingly, less managed home-garden cacao forests harbored the lowest fungal richness and diversity. Our results suggest that the composition of bacterial and fungal endophyte communities is predominantly affected by agroforestry management systems and, to a lesser extent, by environmental properties. The core microbiome detected comprised important fungal phytopathogens, such as Lasiodiplodia species. Several predicted pathways of bacterial endophytes and functional guilds of fungal endophytes differed between the agroforest systems which might be attributed to bacteria and fungi specifically associated with a single agroforest. Our results provide the basis for future studies on foliar fungal and bacterial endophytes of T. cacao and their responsiveness towards agroforestry management systems.


2019 ◽  
Vol 7 (2) ◽  
pp. 37 ◽  
Author(s):  
Bernd Wemheuer ◽  
Torsten Thomas ◽  
Franziska Wemheuer

Despite the importance of endophytic fungi for plant health, it remains unclear how these fungi are influenced by grassland management practices. Here, we investigated the effect of fertilizer application and mowing frequency on fungal endophyte communities and their life strategies in aerial tissues of three agriculturally important grass species (Dactylis glomerata L., Festuca rubra L. and Lolium perenne L.) over two consecutive years. Our results showed that the management practices influenced fungal communities in the plant holobiont, but observed effects differed between grass species and sampling year. Phylogenetic diversity of fungal endophytes in D. glomerata was significantly affected by mowing frequency in 2010, whereas fertilizer application and the interaction of fertilization with mowing frequency had a significant impact on community composition of L. perenne in 2010 and 2011, respectively. Taken together, our research provides a basis for future studies on responses of fungal endophytes towards management practices. To the best of our knowledge, this is the first study simultaneously assessing fungal endophyte communities in aerial parts of three agriculturally important grass species over two consecutive years.


Planta Medica ◽  
2016 ◽  
Vol 81 (S 01) ◽  
pp. S1-S381
Author(s):  
A Triastuti ◽  
M Vansteelandt ◽  
F Barakat ◽  
P Jargeat ◽  
L Rieusset ◽  
...  

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