Combining Phylogenetic and Network Approaches to Identify HIV-1 Transmission Links in San Mateo County, California

Frontiers in Microbiology ◽

10.3389/fmicb.2018.02799 ◽

2018 ◽

Vol 9 ◽

Cited By ~ 1

Author(s):

Sudeb C. Dalai ◽

Dennis Maletich Junqueira ◽

Eduan Wilkinson ◽

Renee Mehra ◽

Sergei L. Kosakovsky Pond ◽

...

Keyword(s):

San Mateo County ◽

Network Approaches ◽

Hiv 1

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Exploring the conformational dynamics and flexibility of intrinsically disordered HIV-1 Nef protein using molecular dynamic network approaches

3 Biotech ◽

10.1007/s13205-021-02698-8 ◽

2021 ◽

Vol 11 (4) ◽

Author(s):

Anil Bhattarai ◽

Isaac Arnold Emerson

Keyword(s):

Molecular Dynamic ◽

Conformational Dynamics ◽

Dynamic Network ◽

Intrinsically Disordered ◽

Network Approaches ◽

Hiv 1

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Rapid activity prediction of HIV-1 integrase inhibitors: harnessing docking energetic components for empirical scoring by chemometric and artificial neural network approaches

Journal of Computer-Aided Molecular Design ◽

10.1007/s10822-016-9917-0 ◽

2016 ◽

Vol 30 (6) ◽

pp. 471-488 ◽

Cited By ~ 2

Author(s):

Patcharapong Thangsunan ◽

Sila Kittiwachana ◽

Puttinan Meepowpan ◽

Nawee Kungwan ◽

Panchika Prangkio ◽

...

Keyword(s):

Neural Network ◽

Artificial Neural Network ◽

Integrase Inhibitors ◽

Activity Prediction ◽

Artificial Neural ◽

Network Approaches ◽

Hiv 1

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HIV-1 evolution and drug resistance among patients receiving antiretroviral therapy in San Mateo county, California, 1997-2006

Retrovirology ◽

10.1186/1742-4690-7-s1-p20 ◽

2010 ◽

Vol 7 (S1) ◽

Author(s):

Sudeb Dalai ◽

Jonathan Dyal ◽

Keyan Salari ◽

Seble Kassaye ◽

Vivian Levy ◽

...

Keyword(s):

Drug Resistance ◽

Antiretroviral Therapy ◽

San Mateo County ◽

Hiv 1

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Ultrastructural observations of human monocytes infected with HIV-1

Proceedings, annual meeting, Electron Microscopy Society of America ◽

10.1017/s0424820100084843 ◽

1991 ◽

Vol 49 ◽

pp. 108-109

Author(s):

James K. Koehler ◽

Steven G. Reed ◽

Joao S. Silva

Keyword(s):

Gradient Centrifugation ◽

Virus Production ◽

Human Monocyte ◽

Red Cross ◽

Human Monocytes ◽

Blood Monocytes ◽

Hiv Replication ◽

Electron Microscopic ◽

Ultrastructural Studies ◽

Hiv 1

As part of a larger study involving the co-infection of human monocyte cultures with HIV and protozoan parasites, electron microscopic observations were made on the course of HIV replication and infection in these cells. Although several ultrastructural studies of the cytopathology associated with HIV infection have appeared, few studies have shown the details of virus production in “normal,” human monocytes/macrophages, one of the natural targets of the virus, and suspected of being a locus of quiescent virus during its long latent period. In this report, we detail some of the interactions of developing virons with the membranes and organelles of the monocyte host.Peripheral blood monocytes were prepared from buffy coats (Portland Red Cross) by Percoll gradient centrifugation, followed by adherence to cover slips. 90-95% pure monocytes were cultured in RPMI with 5% non-activated human AB serum for four days and infected with 100 TCID50/ml of HIV-1 for four hours, washed and incubated in fresh medium for 14 days.

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