scholarly journals Interactive Effects of Pesticides and Nutrients on Microbial Communities Responsible of Litter Decomposition in Streams

2018 ◽  
Vol 9 ◽  
Author(s):  
Florent Rossi ◽  
Stéphane Pesce ◽  
Clarisse Mallet ◽  
Christelle Margoum ◽  
Arnaud Chaumot ◽  
...  
Keyword(s):  
Microbial Communities ◽  
Litter Decomposition ◽  
Interactive Effects

scholarly journals Effects of Lime Application and Understory Removal on Soil Microbial Communities in Subtropical Eucalyptus L’Hér. Plantations

Forests ◽  
2019 ◽  
Vol 10 (4) ◽  
pp. 338 ◽  
Author(s):  
Songze Wan ◽  
Zhanfeng Liu ◽  
Yuanqi Chen ◽  
Jie Zhao ◽  
Qin Ying ◽  
...  
Keyword(s):  
Microbial Communities ◽  
Litter Decomposition ◽  
Decomposition Rate ◽  
Environmental Changes ◽  
Soil Microbial Communities ◽  
Dissolved Carbon ◽  
Soil Microbial ◽  
Litter Decomposition Rate ◽  
Eucalyptus Plantations ◽  
Lime Application

Soil microorganisms play key roles in ecosystems and respond quickly to environmental changes. Liming and/or understory removal are important forest management practices and have been widely applied to planted forests in humid subtropical and tropical regions of the world. However, few studies have explored the impacts of lime application, understory removal, and their interactive effects on soil microbial communities. We conducted a lime application experiment combined with understory removal in a subtropical Eucalyptus L’Hér. plantation. Responses of soil microbial communities (indicated by phospholipid fatty acids, PLFAs), soil physico-chemical properties, and litter decomposition rate to lime and/or understory removal were measured. Lime application significantly decreased both fungal and bacterial PLFAs, causing declines in total PLFAs. Understory removal reduced the fungal PLFAs but had no effect on the bacterial PLFAs, leading to decreases in the total PLFAs and in the ratio of fungal to bacterial PLFAs. No interaction between lime application and understory removal on soil microbial community compositions was observed. Changes in soil microbial communities caused by lime application were mainly attributed to increases in soil pH and NO3–-N contents, while changes caused by understory removal were mainly due to the indirect effects on soil microclimate and the decreased soil dissolved carbon contents. Furthermore, both lime application and understory removal significantly reduced the litter decomposition rates, which indicates the lime application and understory removal may impact the microbe-mediated soil ecological process. Our results suggest that lime application may not be suitable for the management of subtropical Eucalyptus plantations. Likewise, understory vegetation helps to maintain soil microbial communities and litter decomposition rate; it should not be removed from Eucalyptus plantations.

scholarly journals Microbial food web dynamics along a soil chronosequence of a glacier forefield

2011 ◽  
Vol 8 (11) ◽  
pp. 3283-3294 ◽  
Author(s):  
J. Esperschütz ◽  
A. Pérez-de-Mora ◽  
K. Schreiner ◽  
G. Welzl ◽  
F. Buegger ◽  
...  
Keyword(s):  
Food Web ◽  
Microbial Communities ◽  
Food Webs ◽  
Litter Decomposition ◽  
Developmental Stages ◽  
Food Web Dynamics ◽  
Glacier Forefield ◽  
Microbial Food Webs ◽  
And Function ◽  
The 19Th Century

Abstract. Microbial food webs are critical for efficient nutrient turnover providing the basis for functional and stable ecosystems. However, the successional development of such microbial food webs and their role in "young" ecosystems is unclear. Due to a continuous glacier retreat since the middle of the 19th century, glacier forefields have expanded offering an excellent opportunity to study food web dynamics in soils at different developmental stages. In the present study, litter degradation and the corresponding C fluxes into microbial communities were investigated along the forefield of the Damma glacier (Switzerland). 13C-enriched litter of the pioneering plant Leucanthemopsis alpina (L.) Heywood was incorporated into the soil at sites that have been free from ice for approximately 10, 60, 100 and more than 700 years. The structure and function of microbial communities were identified by 13C analysis of phospholipid fatty acids (PLFA) and phospholipid ether lipids (PLEL). Results showed increasing microbial diversity and biomass, and enhanced proliferation of bacterial groups as ecosystem development progressed. Initially, litter decomposition proceeded faster at the more developed sites, but at the end of the experiment loss of litter mass was similar at all sites, once the more easily-degradable litter fraction was processed. As a result incorporation of 13C into microbial biomass was more evident during the first weeks of litter decomposition. 13C enrichments of both PLEL and PLFA biomarkers following litter incorporation were observed at all sites, suggesting similar microbial foodwebs at all stages of soil development. Nonetheless, the contribution of bacteria, especially actinomycetes to litter turnover became more pronounced as soil age increased in detriment of archaea, fungi and protozoa, more prominent in recently deglaciated terrain.

scholarly journals Effects of Crop Rotation and Biocontrol Amendments on Rhizoctonia Disease of Potato and Soil Microbial Communities

Agriculture ◽  
2020 ◽  
Vol 10 (4) ◽  
pp. 128 ◽  
Author(s):  
Robert P. Larkin ◽  
Marin T. Brewer
Keyword(s):  
Microbial Communities ◽  
Tuber Yield ◽  
Soil Microbial Communities ◽  
Stem Canker ◽  
Field Trials ◽  
Interactive Effects ◽  
Soil Microbial ◽  
Complex Interactions ◽  
Rhizoctonia Disease ◽  
Rotation Crops

Rotation crops and biocontrol amendments were investigated for suppression of Rhizoctonia solani on potato (Solanum tuberosum) and their interactive effects on soil microbial communities. Greenhouse trials were conducted to evaluate selected rotation crops, including barley, common and “Lemtal” ryegrass, clover, potato, and combinations of barley with ryegrass or clover, for their effects on populations of R. solani and Rhizoctonia disease. Potato and clover preceding potato resulted in higher disease severity than most other rotations, whereas ryegrass reduced stem canker severity. In addition, all ryegrass treatments resulted in substantially higher populations of R. zeae. Field trials evaluating selected biocontrol treatments in combination with different rotations were conducted at two locations in Maine. Potatoes were treated with the biocontrol organisms Laetisaria arvalis, Trichoderma virens, or Bacillus subtilis and planted following rotation crops of barley and ryegrass, barley and clover, or potato. The barley/ryegrass rotation significantly reduced incidence and severity of stem canker and increased tuber yield at one location. Efficacy of the biocontrol treatments varied by rotation and location, with L. arvalis and T. virens reducing black scurf in some rotations and increasing some aspects of tuber yield at one location. Soil microbial community characteristics differed among rotation crops and biocontrol treatments. Significant crop by biocontrol interactions were observed demonstrating the complex interactions among rotation crops, biocontrol treatments, and soil microbial communities, as well as indicating that biocontrol can be enhanced within beneficial rotations.

scholarly journals Inconsistent response of soil bacterial and fungal communities in aggregates to litter decomposition during short-term incubation

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e8078 ◽  
Author(s):  
Jingjing Li ◽  
Chao Yang
Keyword(s):  
Microbial Communities ◽  
Carbon Storage ◽  
Litter Decomposition ◽  
Relative Abundance ◽  
Carbon Emissions ◽  
Aggregate Size ◽  
Shannon Index ◽  
Fungal Communities ◽  
Litter Addition ◽  
Soil Bacterial

Background Soil aggregate-size classes and microbial communities within the aggregates are important factors regulating the soil organic carbon (SOC) turnover. However, the response of soil bacterial and fungal communities in aggregates to litter decomposition in different aggregate-size classes is poorly understand. Methods Soil samples from un-grazed natural grassland were separated into four dry aggregate classes of different sizes (2–4 mm, 1–2 mm, 0.25–1 mm and <0.25 mm). Two types of plant litter (leaf and stem) of Leymus chinensis were added to each of the four aggregate class samples. The CO2 release rate, SOC storage and soil microbial communities were measured at the end of the 56-day incubation. Results The results showed that the 1–2 mm aggregate had the highest bacterial Shannon and CO2 release in CK and leaf addition treatments, and the SOC in the <0.25 mm aggregate was higher than that in the others across the treatments. The relative abundance of Ascomycota was higher in the 2–4 mm and <0.25 mm aggregates than in the 1–2 mm and 0.25–1 mm aggregates in the treatment without litter addition, and the relative abundance of Aphelidiomycota was lower in the 2–4 mm and <0.25 mm aggregates than in the 1–2 mm and 0.25–1 mm aggregates. Also, litter addition increased the relative abundance of Proteobacteria and Bacteroidetes, but decreased the relative abundance of Acidobacteria, Gemmatimonadetes, and Actinobacteria. The relative abundance of Ascomycota and Aphelidiomycota increased by more than 10% following leaf litter addition. The bacterial Shannon index had a significantly positive and direct effect on SOC concentration and CO2 release, while the fungal Shannon index was significantly correlated with SOC concentration. Our results indicate that the soil bacterial diversity contributes positively to both carbon emissions and carbon storage, whereas soil fungal diversity can promote carbon storage and decrease carbon emissions.

scholarly journals Effects of long-term warming and enhanced nitrogen and sulfur deposition on microbial communities in a boreal peatland

2019 ◽  
Author(s):  
Magalí Martí ◽  
Alexander Eiler ◽  
Moritz Buck ◽  
Stefan Bertilsson ◽  
Waleed Abu Al-Soud ◽  
...  
Keyword(s):  
Microbial Communities ◽  
Synergistic Effects ◽  
Vascular Plant ◽  
Nitrogen Addition ◽  
Interactive Effects ◽  
Gene Repertoire ◽  
Ecosystem Responses ◽  
Shotgun Metagenomics ◽  
The Individual

AbstractWith ongoing environmental change, it is important to understand ecosystem responses to multiple perturbations over long time scales at in situ conditions. Here, we investigated the individual and combined effects of 18 years of warming and enhanced nitrogen and sulfate deposition on peat microbial communities in a nutrient-poor boreal mire. The three perturbations individually affected prokaryotic community composition, where nitrogen addition had the most pronounced effect, and its combination with the other perturbations led to additive effects. The functional potential of the community, characterized by shotgun metagenomics, was strongly affected by the interactive effects in the combined treatments. The responses in composition were also partly reflected in the functional gene repertoire and in altered carbon turnover, i.e. an increase of methane production rates as a result of nitrogen addition and a decrease with warming. Long-term nitrogen addition and warming-induced changes caused a shift from Sphagnum-dominated plant communities to vascular plant dominance, which likely transact with many of the observed microbial responses. We conclude that simultaneous perturbations do not always lead to synergistic effects, but can also counteract and even neutralize one another, and thus must be studied in combination when attempting to predict future characteristics and services of peatland ecosystems.

Litter decomposition and microbial communities alters depending on litter type and overstory species in revegetated agricultural land

Pedobiologia ◽  
2021 ◽  
Vol 84 ◽  
pp. 150702
Author(s):  
Daniela Carnovale ◽  
Alan E. Richardson ◽  
Peter H. Thrall ◽  
Andrew Bissett ◽  
Geoff Baker
Keyword(s):  
Microbial Communities ◽  
Litter Decomposition ◽  
Agricultural Land ◽  
Litter Type

Soil processes and microbial community structures in 45- and 135-year-old lodgepole pine stands

2009 ◽  
Vol 39 (11) ◽  
pp. 2263-2271 ◽  
Author(s):  
A. Chatterjee ◽  
L.J. Ingram ◽  
G.F. Vance ◽  
P.D. Stahl
Keyword(s):  
Microbial Community ◽  
Microbial Communities ◽  
Litter Decomposition ◽  
Lodgepole Pine ◽  
Soil Microbial Communities ◽  
Stand Age ◽  
Tree Biomass ◽  
Decomposition Rates ◽  
Soil Microbial ◽  
Live Tree

As forests develop, changes in soil organic matter quantity and quality affect both nutrient dynamics and microbial community structure. Litter decomposition and nitrogen mineralization in association with soil microbial communities were compared between 45- and 135-year-old lodgepole pine ( Pinus contorta var. latifolia (Englem.)) stands in southeastern Wyoming, USA. Compared with the 45-year-old stand, the 135-year-old stand was found to have greater live-tree biomass, litter decomposition rates (264 versus 135 mg·(g litter)–1·year–1), soil nitrification rates (0.38 versus 0.19 µg NO3–·(g soil)–1 after 265 days of field incubation), and total phospholipid fatty acid (PLFA) concentrations (25 versus 9.2 nmol·(g soil)–1 at 0–5 cm depth). Canonical correspondence analysis indicated that variation of PLFA profiles within the 45-year-old stand was explained by soil pH and bulk density, whereas soil process rates explained the distributions of PLFA profiles within the 135-year-old stand. The results of these studies indicate that stand age influences live-tree biomass and soil properties that can lead to changes in litter decomposition rates and soil microbial communities in lodgepole pine forests.

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