scholarly journals Biosurfactant and Degradative Enzymes Mediated Crude Oil Degradation by Bacterium Bacillus subtilis A1

2017 ◽  
Vol 8 ◽  
Author(s):  
Punniyakotti Parthipan ◽  
Elumalai Preetham ◽  
Laura L. Machuca ◽  
Pattanathu K. S. M. Rahman ◽  
Kadarkarai Murugan ◽  
...  
2020 ◽  
Vol 3 (1) ◽  
pp. 53 ◽  
Author(s):  
Adi Setyo Purnomo ◽  
Hamdan Dwi Rizqi ◽  
Lia Harmelia

Crude oil spills pose a serious threat to the marine environment. This is due to crude oil, in large part, is composed of aromatic, aliphatic, and alicyclic hydrocarbons which are toxic, carcinogenic, and mutagenic to the marine life. However, the degradation of crude oil spills with bacteria in simulated seawater media is rarely reported. In this study, oil spill in the seawater, especially petroleum, had been successfully degraded by bacterium culture Bacillus subtilis in simulated seawater under 7 and 14 days incubation.  Simulated seawater had synthesized based on ASTM D1141-98 for Standard Practice for the Preparation of Substitute Ocean Water. The petroleum recovery was analyzed using Gas chromatography-mass spectrometry.  In this research, the optimum recovery value of crude oil degradation by the bacterial culture obtained by octadecadienoic acid compound gave a percentage recovery of 8.20% and 8.87% after 7 and 14 days of incubation, respectively. This result indicated that the B. subtilis culture has the ability to degrade crude oil spill in simulated sea water.


2021 ◽  
Vol 201 ◽  
pp. 108458
Author(s):  
Konomi Suda ◽  
Masayuki Ikarashi ◽  
Hideyuki Tamaki ◽  
Satoshi Tamazawa ◽  
Susumu Sakata ◽  
...  

2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Naomi Shimokawa-Chiba ◽  
Claudia Müller ◽  
Keigo Fujiwara ◽  
Bertrand Beckert ◽  
Koreaki Ito ◽  
...  

AbstractRescue of the ribosomes from dead-end translation complexes, such as those on truncated (non-stop) mRNA, is essential for the cell. Whereas bacteria use trans-translation for ribosome rescue, some Gram-negative species possess alternative and release factor (RF)-dependent rescue factors, which enable an RF to catalyze stop-codon-independent polypeptide release. We now discover that the Gram-positive Bacillus subtilis has an evolutionarily distinct ribosome rescue factor named BrfA. Genetic analysis shows that B. subtilis requires the function of either trans-translation or BrfA for growth, even in the absence of proteotoxic stresses. Biochemical and cryo-electron microscopy (cryo-EM) characterization demonstrates that BrfA binds to non-stop stalled ribosomes, recruits homologous RF2, but not RF1, and induces its transition into an open active conformation. Although BrfA is distinct from E. coli ArfA, they use convergent strategies in terms of mode of action and expression regulation, indicating that many bacteria may have evolved as yet unidentified ribosome rescue systems.


Heterocycles ◽  
2013 ◽  
Vol 87 (2) ◽  
pp. 307 ◽  
Author(s):  
Hee Jae Shin ◽  
Fakir Shahidullah Tareq ◽  
Ji Hye Kim ◽  
Min Ah Lee ◽  
Hyi-Seung Lee ◽  
...  

2014 ◽  
Vol 164 ◽  
pp. 275-284 ◽  
Author(s):  
Ean Warren ◽  
Natasha J. Sihota ◽  
Frances D. Hostettler ◽  
Barbara A. Bekins

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