scholarly journals A Pipeline for Reconstructing Somatic Copy Number Alternation’s Subclonal Population-Based Next-Generation Sequencing Data

2020 ◽  
Vol 10 ◽  
Author(s):  
Yanshuo Chu ◽  
Chenxi Nie ◽  
Yadong Wang
Keyword(s):  
Next Generation Sequencing ◽  
Copy Number ◽  
Population Based ◽  
Next Generation Sequencing Data ◽  
Next Generation ◽  
Sequencing Data ◽  
Generation Sequencing

scholarly journals cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate

2012 ◽  
Vol 40 (9) ◽  
pp. e69-e69 ◽  
Author(s):  
Günter Klambauer ◽  
Karin Schwarzbauer ◽  
Andreas Mayr ◽  
Djork-Arné Clevert ◽  
Andreas Mitterecker ◽  
...  
Keyword(s):  
Next Generation Sequencing ◽  
False Discovery Rate ◽  
Copy Number ◽  
Copy Number Variations ◽  
Next Generation Sequencing Data ◽  
Next Generation ◽  
Sequencing Data ◽  
False Discovery ◽  
Generation Sequencing

scholarly journals Assessing Copy Number Alterations in Targeted, Amplicon-Based Next-Generation Sequencing Data

2015 ◽  
Vol 17 (1) ◽  
pp. 53-63 ◽  
Author(s):  
Catherine Grasso ◽  
Timothy Butler ◽  
Katherine Rhodes ◽  
Michael Quist ◽  
Tanaya L. Neff ◽  
...  
Keyword(s):  
Next Generation Sequencing ◽  
Copy Number ◽  
Next Generation Sequencing Data ◽  
Copy Number Alterations ◽  
Next Generation ◽  
Sequencing Data ◽  
Generation Sequencing

scholarly journals Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data

2011 ◽  
Vol 28 (3) ◽  
pp. 423-425 ◽  
Author(s):  
Valentina Boeva ◽  
Tatiana Popova ◽  
Kevin Bleakley ◽  
Pierre Chiche ◽  
Julie Cappo ◽  
...  
Keyword(s):  
Next Generation Sequencing ◽  
Copy Number ◽  
Next Generation Sequencing Data ◽  
Next Generation ◽  
Sequencing Data ◽  
Generation Sequencing

scholarly journals Identification of copy number alterations in colon cancer from analysis of amplicon-based next generation sequencing data

Oncotarget ◽  
2018 ◽  
Vol 9 (29) ◽  
pp. 20409-20425 ◽  
Author(s):  
Duarte Mendes Oliveira ◽  
Gianluca Santamaria ◽  
Carmelo Laudanna ◽  
Simona Migliozzi ◽  
Pietro Zoppoli ◽  
...  
Keyword(s):  
Colon Cancer ◽  
Next Generation Sequencing ◽  
Copy Number ◽  
Next Generation Sequencing Data ◽  
Copy Number Alterations ◽  
Next Generation ◽  
Sequencing Data ◽  
Generation Sequencing
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