A deep learning algorithm based on 1D CNN-LSTM for automatic sleep staging

2021 ◽  
pp. 1-14
Author(s):  
Dechun Zhao ◽  
Renpin Jiang ◽  
Mingyang Feng ◽  
Jiaxin Yang ◽  
Yi Wang ◽  
...  
Keyword(s):  
Feature Extraction ◽  
Deep Learning ◽  
Eye Movement ◽  
Short Term Memory ◽  
Learning Algorithm ◽  
Rapid Eye Movement ◽  
Sleep Staging ◽  
Deep Learning Algorithm ◽  
Feature Extraction And Selection ◽  
Long Short Term Memory

BACKGROUND: Sleep staging is an important part of sleep research. Traditional automatic sleep staging based on machine learning requires extensive feature extraction and selection. OBJECTIVE: This paper proposed a deep learning algorithm without feature extraction based on one-dimensional convolutional neural network and long short-term memory. METHODS: The algorithm can automatically divide sleep into 5 phases including awake period, non-rapid eye movement sleep period (N1 ∼ N3) and rapid eye movement using the electroencephalogram signals. The raw signal was processed by the wavelet transform. Then, the processed signal was directly input into the deep learning algorithm to obtain the staging result. RESULTS: The accuracy of staging is 93.47% using the Fpz-Cz electroencephalogram signal. When using the Fpz-Cz and electroencephalogram signal, the algorithm can obtain the highest accuracy of 94.15%. CONCLUSION: These results show that this algorithm is suitable for different physiological signals and can realize end-to-end automatic sleep staging without any manual feature extraction.

scholarly journals Deep learning algorithm evaluation of hypertension classification in less photoplethysmography signals conditions

2021 ◽  
Vol 54 (3-4) ◽  
pp. 439-445
Author(s):  
Chih-Ta Yen ◽  
Sheng-Nan Chang ◽  
Cheng-Hong Liao
Keyword(s):  
Deep Learning ◽  
Short Term Memory ◽  
Learning Algorithm ◽  
Training Data ◽  
Short Term ◽  
Deep Learning Algorithm ◽  
Testing Dataset ◽  
Data Points ◽  
Optimal Classification ◽  
Long Short Term Memory

This study used photoplethysmography signals to classify hypertensive into no hypertension, prehypertension, stage I hypertension, and stage II hypertension. There are four deep learning models are compared in the study. The difficulties in the study are how to find the optimal parameters such as kernel, kernel size, and layers in less photoplethysmographyt (PPG) training data condition. PPG signals were used to train deep residual network convolutional neural network (ResNetCNN) and bidirectional long short-term memory (BILSTM) to determine the optimal operating parameters when each dataset consisted of 2100 data points. During the experiment, the proportion of training and testing datasets was 8:2. The model demonstrated an optimal classification accuracy of 76% when the testing dataset was used.

scholarly journals Development and Assessment of Water-Level Prediction Models for Small Reservoirs Using a Deep Learning Algorithm

Water ◽  
2021 ◽  
Vol 14 (1) ◽  
pp. 55
Author(s):  
Tsumugu Kusudo ◽  
Atsushi Yamamoto ◽  
Masaomi Kimura ◽  
Yutaka Matsuno
Keyword(s):  
Water Management ◽  
Deep Learning ◽  
Water Level ◽  
Short Term Memory ◽  
Learning Algorithm ◽  
Water Levels ◽  
Short Term ◽  
Term Memory ◽  
Deep Learning Algorithm ◽  
Long Short Term Memory

In this study, we aimed to develop and assess a hydrological model using a deep learning algorithm for improved water management. Single-output long short-term memory (LSTM SO) and encoder-decoder long short-term memory (LSTM ED) models were developed, and their performances were compared using different input variables. We used water-level and rainfall data from 2018 to 2020 in the Takayama Reservoir (Nara Prefecture, Japan) to train, test, and assess both models. The root-mean-squared error and Nash–Sutcliffe efficiency were estimated to compare the model performances. The results showed that the LSTM ED model had better accuracy. Analysis of water levels and water-level changes presented better results than the analysis of water levels. However, the accuracy of the model was significantly lower when predicting water levels outside the range of the training datasets. Within this range, the developed model could be used for water management to reduce the risk of downstream flooding, while ensuring sufficient water storage for irrigation, because of its ability to determine an appropriate amount of water for release from the reservoir before rainfall events.

scholarly journals An Improved Deep Learning Algorithm for Risk Prediction of Corporate Internet Reporting

2020 ◽  
Vol 34 (4) ◽  
pp. 437-444
Author(s):  
Lingyan Ou ◽  
Ling Chen
Keyword(s):  
Deep Learning ◽  
Risk Prediction ◽  
Short Term Memory ◽  
Learning Algorithm ◽  
Moving Average ◽  
Arma Model ◽  
Evaluation Index System ◽  
Online Information ◽  
Deep Learning Algorithm ◽  
Research Findings

Corporate internet reporting (CIR) has such advantages as the strong timeliness, large amount, and wide coverage of financial information. However, the CIR, like any other online information, faces various risks. With the aid of the increasingly sophisticated artificial intelligence (AI) technology, this paper proposes an improved deep learning algorithm for the prediction of CIR risks, aiming to improve the accuracy of CIR risk prediction. After building a reasonable evaluation index system (EIS) for CIR risks, the data involved in risk rating and the prediction of risk transmission effect (RTE) were subject to structured feature extraction and time series construction. Next, a combinatory CIR risk prediction model was established by combining the autoregressive moving average (ARMA) model with long short-term memory (LSTM). The former is good at depicting linear series, and the latter excels in describing nonlinear series. Experimental results demonstrate the effectiveness of the ARMA-LSTM model. The research findings provide a good reference for applying AI technology in risk prediction of other areas.

scholarly journals NanoReviser: An Error-correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm

2020 ◽  
Author(s):  
Luotong Wang ◽  
Li Qu ◽  
Longshu Yang ◽  
Yiying Wang ◽  
Huaiqiu Zhu
Keyword(s):  
Deep Learning ◽  
Error Rate ◽  
Short Term Memory ◽  
Learning Algorithm ◽  
Consensus Sequence ◽  
Sequencing Error ◽  
Nanopore Sequencing ◽  
Electrical Signals ◽  
E Coli ◽  
Deep Learning Algorithm

AbstractNanopore sequencing is regarded as one of the most promising third-generation sequencing (TGS) technologies. Since 2014, Oxford Nanopore Technologies (ONT) has developed a series of devices based on nanopore sequencing to produce very long reads, with an expected impact on genomics. However, the nanopore sequencing reads are susceptible to a fairly high error rate owing to the difficulty in identifying the DNA bases from the complex electrical signals. Although several basecalling tools have been developed for nanopore sequencing over the past years, it is still challenging to correct the sequences after applying the basecalling procedure. In this study, we developed an open-source DNA basecalling reviser, NanoReviser, based on a deep learning algorithm to correct the basecalling errors introduced by current basecallers provided by default. In our module, we re-segmented the raw electrical signals based on the basecalled sequences provided by the default basecallers. By employing convolution neural networks (CNNs) and bidirectional long short-term memory (Bi-LSTM) networks, we took advantage of the information from the raw electrical signals and the basecalled sequences from the basecallers. Our results showed NanoReviser, as a post-basecalling reviser, significantly improving the basecalling quality. After being trained on standard ONT sequencing reads from public E. coli and human NA12878 datasets, NanoReviser reduced the sequencing error rate by over 5% for both the E. coli dataset and the human dataset. The performance of NanoReviser was found to be better than those of all current basecalling tools. Furthermore, we analyzed the modified bases of the E. coli dataset and added the methylation information to train our module. With the methylation annotation, NanoReviser reduced the error rate by 7% for the E. coli dataset and specifically reduced the error rate by over 10% for the regions of the sequence rich in methylated bases. To the best of our knowledge, NanoReviser is the first post-processing tool after basecalling to accurately correct the nanopore sequences without the time-consuming procedure of building the consensus sequence. The NanoReviser package is freely available at https://github.com/pkubioinformatics/NanoReviser.

scholarly journals Real Time LDR Data Prediction using IoT and Deep Learning Algorithm

2020 ◽  
pp. 158-161
Author(s):  
Chandraprabha S ◽  
Pradeepkumar G ◽  
Dineshkumar Ponnusamy ◽  
Saranya M D ◽  
Satheesh Kumar S ◽  
...  
Keyword(s):  
Deep Learning ◽  
Light Intensity ◽  
Real Time ◽  
Short Term Memory ◽  
Learning Algorithm ◽  
Time Interval ◽  
Deep Learning Algorithm ◽  
Data Prediction ◽  
Solar Plant

This paper outfits artificial intelligence based real time LDR data which is implemented in various applications like indoor lightning, and places where enormous amount of heat is produced, agriculture to increase the crop yield, Solar plant for solar irradiance Tracking. For forecasting the LDR information. The system uses a sensor that can measure the light intensity by means of LDR. The data acquired from sensors are posted in an Adafruit cloud for every two seconds time interval using Node MCU ESP8266 module. The data is also presented on adafruit dashboard for observing sensor variables. A Long short-term memory is used for setting up the deep learning. LSTM module uses the recorded historical data from adafruit cloud which is paired with Node MCU in order to obtain the real-time long-term time series sensor variables that is measured in terms of light intensity. Data is extracted from the cloud for processing the data analytics later the deep learning model is implemented in order to predict future light intensity values.

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