scholarly journals Morphological, serological and molecular analyses of anthracnose-causing agent on banana fruit

2009 ◽  
Vol 24 (4) ◽  
pp. 281-286
Author(s):  
Natasa Duduk ◽  
Mirko Ivanovic ◽  
Bojan Duduk
Keyword(s):  
Monoclonal Antibodies ◽  
Host Plant ◽  
Morphological Characteristics ◽  
Elisa Test ◽  
Its Sequence ◽  
Banana Fruit ◽  
Serological Reaction ◽  
Specific Primers ◽  
Molecular Analyses ◽  
Antigen Site

Two species of the genus Colletotrichum, C. musae and C. gloeosporoides, occur as infecting species of banana. The study focused on examining the etiology of anthracnose on banana fruits sold on the domestic market. An isolate was obtained from a diseased banana fruit on PDA medium, forming a white colony with intensive and uniformed growth. It was not possible to identify the isolated fungus based on its morphological characteristics. Positive serological reaction in an ELISA test with monoclonal antibodies for C. acutatum indicated an antigen site for the used monoclonal antibodies. Positive reaction when C. gloeosporioides-specific primers were applied indicated a similarity in the ITS sequence of the fungus and the examined isolate from banana fruit. Although there are no available data in literature that C. gloeosporioides-specific CgInt primer can be used for amplification of the phylogenetically related C. musae, our results do not exclude that the isolate could be C. musae. The host plant, symptoms observed and colony characteristics of the fungus isolated from the banana fruit mostly correspond to C. musae. Based on morphological, antigen and gentic characteristics, the isolate from banana was determined as Colletotrichum sp., while species identification of the anthracnose-causing agent on banana requires additional analysis.

scholarly journals First Report of Ratoon Stunt of Sugarcane Caused by Leifsonia xyli subsp. xyli in Pakistan

Plant Disease ◽  
2011 ◽  
Vol 95 (12) ◽  
pp. 1581-1581 ◽  
Author(s):  
S.-Z. Hussnain ◽  
S. Afghan ◽  
M.-I. Haq ◽  
S.-M. Mughal ◽  
A. Shahazad ◽  
...  
Keyword(s):  
Morphological Characteristics ◽  
Elisa Test ◽  
Bacterial Suspension ◽  
Vascular Bundles ◽  
Serological Reaction ◽  
Chemical Test ◽  
First Report ◽  
Stunted Growth ◽  
Sugarcane Crop ◽  
Punjab Province

Sugarcane (Saccharum hybrids), the second largest cash crop of Pakistan, is planted on 1.029 million ha with an annual production of 50 million tons. During a survey of the sugarcane crop in Faisalabad, Sargodha, and the Dera Ghazi Khan Division of the Punjab Province of Pakistan from 2007 to 2010, symptoms consistent with ratoon stunting, including stunted growth and reddening of the vascular bundles at the nodal regions (1), was observed on sugarcane cvs. CP77-400, SPF-241, CP72-2086, and NCo-310. CP72-2086 and NCo-310 showed severely stunted growth in both crop cycles. A chemical test was performed for detecting ratoon stunt from the field. Longitudinal sections of mature nodes were treated with a combination of hydrogen peroxide and hydrochloric acid. Healthy canes developed a blue-green color in the parenchymatous tissue around the fibrovascular bundles, diseased cane did not. This field test illustrated that as much as 25% of the plants were infected by ratoon stunt in the survey area. Aerobic bacteria were isolated from a stunted sample (NCo-310) on modified sugarcane medium (17 g of cornmeal agar, 8 g of peptone from soy meal, 1 g of K2HPO4, 1 g of KH2PO4, 0.2 g of MgSO4·7H2O, 0.5 g of glucose, 1 g of cysteinefree base, 2 g of bovine serum albumin, and 15 mg of bovine hemin chloride) and incubated for 3 to 4 weeks at 28°C. Light, off-white, round, and raised growth bacterial colonies (1.5 to 4.5 × 0.2 to 0.35 μm). Isolates were positive for the gram and catalase reactions and negative for oxidase, aesculin hydrolysis, urease production, and motility. The pathogen was identified as Leifsonia xyli subsp. xyli (formerly Clavibacter xyli subsp. xyli) based on its morphological characteristics (2). A direct antigen coating-ELISA was developed with antiserum raised against L. xyli subsp. xyli at the National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan. Infected or suspected to be infected plants of different cultivars were used for an ELISA test. Results showed that sugarcane cvs. NCo-310 (Log 1.342 CFU/ml) and CP72-2086 (Log 0.118 CFU/ml) had higher L. xyli subsp. xyli titres than the other cultivars tested (SPF-213 [Log 0.071CFU/ml], CPF-237 [Log 0.077CFU/ml], HSF-240 [Log 0.069 CFU/ml], NSG-555 [Log 0.060 CFU/ml], SPSG-26 [Log 0.076 CFU/ml], SPSG-79 [Log 0.074 CFU/ml], SPF-238 [Log 0.057 CFU/ml], and CP77-400 [Log 0.063 CFU/ml]). Cv. SPF-241 (Log 0.107 CFU/ml) was weakly positive for ratoon stunt (4). Axillary buds of sugarcane were injected via a sterile hypodermic syringe with an 18-gauge needle to deliver a bacterial suspension of 109 cells/ml (3). Inoculated sugarcane plants were examined at intervals over 9 months for the development of symptoms and the presence of bacteria. Cultivars were evaluated on the basis of average number of colonized vascular bundles. SPF-213, CPF-237, HSF-240, NSG-555, SPSG-26, SPSG-79, SPF-238, and CP77-400 were resistant; SPF-241 showed moderate resistance and CP72-2086 and NCo-310 were highly susceptible to ratoon stunt. The pathogen was reisolated from the inoculated plants and identified as L. xyli subsp. xyli by bacteriological tests and its serological reaction. To our knowledge, this is the first report of ratoon stunt of sugarcane in Punjab Province of Pakistan. References: (1) M. J. Davis et al. Science 210:1365, 1980. (2) L. I. Evtushenko et al. Int. J. Syst. Evol. Microbiol. 50:371, 2000. (3) M. P. Nayiager et al. Phytopathol. Z. 99:273, 1980. (4) G.-P. Rao and G.-P. Singh. Sugar Tech. 2:35, 2000.

Prosopanche cocuccii (Hydnoraceae): a new species from Southern Brazil

Phytotaxa ◽  
2021 ◽  
Vol 521 (3) ◽  
pp. 177-192
Author(s):  
JORDANO D. TAVARES DE CARVALHO ◽  
CATARINE MARKUS ◽  
ALDO MEROTTO JUNIOR ◽  
RENATO A. ZÁCHIA ◽  
MARILIA SCHUCH ◽  
...  
Keyword(s):  
New Species ◽  
Nicotiana Tabacum ◽  
Host Plant ◽  
Morphological Characteristics ◽  
Southern Brazil ◽  
Habitat Ecology ◽  
Single Host ◽  
Flower Organs ◽  
General Size ◽  
A New Species

Prosopanche cocuccii is described as a new species from Southern Brazil. It resembles P. bonacinae due to the trigonous rhizome and by the general size of the flower organs. Nevertheless, P. cocuccii is distinguished by the main floral morphological characteristics used to differentiate species. In addition, the new species presents some rare characters for the genus, such as a highly branched rhizome and flowers usually grouped in fascicles. We provide a description, illustrations, field photographs, morphological details under the stereomicroscope, and comments on habitat, ecology, distribution, and conservation of the new species, as well as an updated key for the genus Prosopanche. In addition, we identified that P. cocuccii produces a large number of rhizomes and fruits for each single host specimen of tobacco (Nicotiana tabacum), which resulted in a decrease in height and growth of its only known host plant.

Phylogenetic Relations of Rhizoplaca Zopf. from Anatolia Inferred from ITS Sequence Data

2006 ◽  
Vol 61 (5-6) ◽  
pp. 405-412 ◽  
Author(s):  
Demet Cansaran ◽  
Sümer Aras ◽  
İrfan Kandemir ◽  
Gökhan Halıcı
Keyword(s):  
Genetic Variability ◽  
Phylogenetic Tree ◽  
Sequence Data ◽  
Volcanic Rocks ◽  
Morphological Characteristics ◽  
Its Rdna ◽  
Its Sequence ◽  
Phylogenetic Relations ◽  
Rdna Sequences

Like many lichen-forming fungi, species of the genus Rhizoplaca have wide geographical distributions, but studies of their genetic variability are limited. The information about the ITS rDNA sequences of three species of Rhizoplaca from Anatolia was generated and aligned with other species from other countries and also with the data belonging to Lecanora species. The examined species were collected from the volcanic rocks of Mount Erciyes which is located in the middle of Anatolia (Turkey). The sequence data aligned with eight other samples of Rhizoplaca and six different species of Lecanora were obtained from GenBank. The results support the concept maintained by Arup and Grube (2000) that Rhizoplaca may not be a genus separate from Lecanora. According to the phylogenetic tree, Rhizoplaca melanopthalma from Turkey with two different samples of R. melanopthalma from Arizona (AF159929, AF159934) and a sample from Austria formed a group under the same branch. R. peltata and R. chrysoleuca samples from Anatolia located in two other branches of the tree formed sister groups with the samples of the same species from different countries. Although R. peltata remained on the same branch with other samples of the same species from other countries it was placed in a different branch within the group. When the three species from Anatolia were considered alone, it was noticed that Rhizoplaca melanopthalma and Rhizoplaca peltata are phylogenetically closer to each other than Rhizoplaca chrysoleuca; the morphological characteristics also support this result.

scholarly journals Current Classification and Diversity of Fusarium Species Complex, the Causal Pathogen of Fusarium Wilt Disease of Banana in Malaysia

Agronomy ◽  
2021 ◽  
Vol 11 (10) ◽  
pp. 1955
Author(s):  
Anysia Hedy Ujat ◽  
Ganesan Vadamalai ◽  
Yukako Hattori ◽  
Chiharu Nakashima ◽  
Clement Kiing Fook Wong ◽  
...  
Keyword(s):  
Fusarium Oxysporum ◽  
Fusarium Wilt ◽  
Species Complex ◽  
Phylogenetic Trees ◽  
Fusarium Species ◽  
Morphological Characteristics ◽  
Pathogenicity Test ◽  
Fusarium Spp ◽  
Specific Primers ◽  
Fusarium Oxysporum Species Complex

The re-emergence of the Fusarium wilt caused by Fusarium odoratissimum (F. odoratissimum) causes global banana production loss. Thirty-eight isolates of Fusarium species (Fusarium spp.) were examined for morphological characteristics on different media, showing the typical Fusarium spp. The phylogenetic trees of Fusarium isolates were generated using the sequences of histone gene (H3) and translation elongation factor gene (TEF-1α). Specific primers were used to confirm the presence of F. odoratissimum. The phylogenetic trees showed the rich diversity of the genus Fusarium related to Fusarium wilt, which consists of F. odoratissimum, Fusarium grosmichelii, Fusarium sacchari, and an unknown species of the Fusarium oxysporum species complex. By using Foc-TR4 specific primers, 27 isolates were confirmed as F. odoratissimum. A pathogenicity test was conducted for 30 days on five different local cultivars including, Musa acuminata (AAA, AA) and Musa paradisiaca (AAB, ABB). Although foliar symptoms showed different severity of those disease progression, vascular symptoms of the inoculated plantlet showed that infection was uniformly severe. Therefore, it can be concluded that the Fusarium oxysporum species complex related to Fusarium wilt of banana in Malaysia is rich in diversity, and F. odoratissimum has pathogenicity to local banana cultivars in Malaysia regardless of the genotype of the banana plants.

scholarly journals Expression of Recombinant Human Glucocerebrosidase Protein in Sunflowers

2019 ◽  
Vol 16 (1) ◽  
pp. 0018
Author(s):  
Al-Dallee Et al.
Keyword(s):  
Molecular Farming ◽  
Elisa Test ◽  
Growth Hormones ◽  
Bacterial Suspension ◽  
Naphthalene Acetic Acid ◽  
Test Results ◽  
Specific Primers ◽  
Colony Pcr ◽  
Plant Expression Vector ◽  
Modern Biotechnology

Molecular farming has become one of the most significant implementations of modern biotechnology to generate modified plant crops to produce medicinal proteins. Agrobacterium is one plant genetic engineering tool that integrates genes of interest inside a host plant.  In recent years, the need to produce recombinant proteins as therapeutics has growing rapidly, and human glucocerebrosidase is one of the proteins that is need to treat disease. In this study, specific primers were designed to amplify Hu-GBA1 gene from constructed pGEM-GBA plasmid which was cloned into the plant expression vector pCAMBIA1304. The generated recombinant pCAMBIA1304-GBA plasmid was used to transform A. tumefaciens LBA4404 and applied for transformation of sunflower cotyledon explants. Colony PCR technique was used to confirm the presence of Hu-GBA1 gene in transformed A. tumefaciens. Agrobacterium containing pCAMBIA1304-GBA was suspended in Infection Medium (IM) supplement with 200 mM acetosyringone. A bacterial suspension was used to transform sunflower cotyledons. After infection, cotyledons were co-cultivated in Co-cultivation medium (CCM), supplied with 200 mM acetosyringone without antibiotics. The cotyledons were then transferred to selection media containing 7.5 mg/L Hygromycin and 250 mg/L Cefotaxime and grown for additional 14 days at 25℃ in photoperiod of  16h L/8h D. The transformed sunflower cotyledons were successfully generated complete plant with used 6-Benzylaminopurine and Naphthalene acetic acid as growth hormones. The presence of the Hu-GBA1 gene in the genomic DNA of transgenic sunflower plant was proven by PCR as a band of 1561bp size. The GBA mRNA expression in modified sunflowers was detected by qRT-PCR compared with control GBA mRNA. Enzyme Linked Immunoassay was done on crude recombinant protein that extracted from transformed sunflower using Human Glucosylceramide ELISA Kit, the Elisa test results confirmed the production of recombinant glucocerebrosidase and the concentration of crude recombinant enzyme extracted from transformed sunflower with GBA1 gene was 0.45 ng/µl

Goodyera malipoensis (Cranichideae, Orchidaceae), a new species from China: Evidence from morphological and molecular analyses

Phytotaxa ◽  
2014 ◽  
Vol 186 (1) ◽  
pp. 51 ◽  
Author(s):  
Qiu-Xiang Chen ◽  
Gui-Zhen Chen ◽  
Ming-He Li ◽  
Shi-Pin Chen
Keyword(s):  
New Species ◽  
Sequence Data ◽  
Detailed Comparison ◽  
Distinct Species ◽  
Molecular Study ◽  
Its Sequence ◽  
Orchid Species ◽  
Molecular Analyses ◽  
Morphological Differences ◽  
A New Species

In this study, we describe a new orchid species, Goodyera malipoensis, from Yunnan, China. We have performed morphological and molecular analyses on this new species. A detailed comparison between the newly discovered orchid and other members of Goodyera was conducted. The new plant is characterized by having a dense brownish green pubescence on the peduncle. Its ovate-lanceolate petal is unique in Goodyera genus. The hypochile is deeply concave-saccate, and inside there are two papillose rows on each side. These features distinguish the new orchid from all other known species of Goodyera. The molecular study based on nuclear ribosomal ITS sequence data and morphological differences support G. malipoensis as a distinct species.

Elisa test system with monoclonal antibodies to human IgG4 for the detection of allergen-specific antibodies in pollinosis

1989 ◽  
Vol 108 (5) ◽  
pp. 1589-1592
Author(s):  
E. V. Chernokhvostova ◽  
T. S. Kotova ◽  
O. I. Atovmyan ◽  
E. L. Arsen'eva ◽  
G. T. Bogacheva ◽  
...  
Keyword(s):  
Monoclonal Antibodies ◽  
Test System ◽  
Elisa Test ◽  
Specific Antibodies

A new species of Usnea (Parmeliaceae, lichenized Ascomycota) from Southwest China

Phytotaxa ◽  
2020 ◽  
Vol 472 (1) ◽  
pp. 23-32
Author(s):  
LIU-FU HAN ◽  
YU-HUAN XIE ◽  
HUAN-BING ZHANG ◽  
LI-SI LI ◽  
SHOU-YU GUO
Keyword(s):  
New Species ◽  
Southwest China ◽  
Sequence Data ◽  
Morphological Characteristics ◽  
Its Sequence ◽  
Nrdna Its ◽  
A New Species

During the study of Usnea from China, we identified and illustrated a new species, Usnea sulphuridiscoidea S. Y. Guo & L. F. Han from the Ailaoshan Mountain of Southwest China, based on morphological characteristics and nrDNA ITS sequence data. This new species can be distinguished morphologically from other apotheciate members of Usnea by the special lateral apothecia with sulphur disc, the inflated branches with glossy surface and numerous papillae as well as many fibrils, meanwhile lacking pseudocyphellae and soralia. The nrDNA ITS sequence data supported the recognition of the new species.

scholarly journals Tracking the Emerging Human Pathogen Pseudallescheria boydii by Using Highly Specific Monoclonal Antibodies

2009 ◽  
Vol 16 (5) ◽  
pp. 756-764 ◽  
Author(s):  
Christopher R. Thornton
Keyword(s):  
Monoclonal Antibodies ◽  
Rhizopus Oryzae ◽  
Morphological Characteristics ◽  
Opportunistic Pathogen ◽  
Immunoglobulin M ◽  
Pseudallescheria Boydii ◽  
Invasive Infections ◽  
Scedosporium Prolificans ◽  
Internally Transcribed Spacer ◽  
White Grain

ABSTRACT Pseudallescheria boydii has long been known to cause white grain mycetoma in immunocompetent humans, but it has recently emerged as an opportunistic pathogen of humans, causing potentially fatal invasive infections in immunocompromised individuals and evacuees of natural disasters, such as tsunamis and hurricanes. The diagnosis of P. boydii is problematic since it exhibits morphological characteristics similar to those of other hyaline fungi that cause infectious diseases, such as Aspergillus fumigatus and Scedosporium prolificans. This paper describes the development of immunoglobulin M (IgM) and IgG1 κ-light chain monoclonal antibodies (MAbs) specific to P. boydii and certain closely related fungi. The MAbs bind to an immunodominant carbohydrate epitope on an extracellular 120-kDa antigen present in the spore and hyphal cell walls of P. boydii and Scedosporium apiospermum. The MAbs do not react with S. prolificans, Scedosporium dehoogii, or a large number of clinically relevant fungi, including A. fumigatus, Candida albicans, Cryptococcus neoformans, Fusarium solani, and Rhizopus oryzae. The MAbs were used in immunofluorescence and double-antibody sandwich enzyme-linked immunosorbent assays (DAS-ELISAs) to accurately differentiate P. boydii from other infectious fungi and to track the pathogen in environmental samples. Specificity of the DAS-ELISA was confirmed by sequencing of the internally transcribed spacer 1 (ITS1)-5.8S-ITS2 rRNA-encoding regions of environmental isolates.

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