scholarly journals Estimation of genetic parameters and breeding values for litter size in the first three parity of landrace sows

2016 ◽  
Vol 32 (3) ◽  
pp. 261-269 ◽  
Author(s):  
Dragomir Lukac ◽  
Vitomir Vidovic ◽  
Teodora Vasiljevic ◽  
Oliver Stankovic
Keyword(s):  
Animal Model ◽  
Genetic Parameters ◽  
Multivariate Analyses ◽  
Reproductive Traits ◽  
Phenotypic Variance ◽  
Breeding Values ◽  
The Third ◽  
Reproduction Traits ◽  
Genetic And Phenotypic Correlations ◽  
Estimated Breeding Values

The aim of this study was to estimate the genetic parameters and breeding values for reproduction traits of Landrace sows in the first three parities by Animal model. Records of 2238 first parity; 2125 second parity and 1872 third parity Landrace sows farrowing between 2007 and 2012 were included in the analysis. The traits included in the analyses were total pigs born (TB), number of pigs born alive (NBA), number of pigs weaned (NW) and litter weaning weight (LW) in the parities. The genetic parameters were estimated using a multivariate analyses Animal model using REML procedure. Estimates of heritability for TB were 0.03, 0.05 and 0.18, for NBA were 0.04, 0.02 and 0.17, for NW were 0.08, 0.08 and 0.01 and for LW were 0.09, 0.11 and 0.03 for parities 1 to 3. Genetic and phenotypic variance were increased from the first to the third parity. Between the majorities of studied reproductive traits were the recorded positive genetic and phenotypic correlations, except between LW and other analyzed properties where they recorded a high correlation negative in third parity. Means of estimated breeding values of reproductive traits from first parity to third parity was indecreased.

scholarly journals A note on genetic parameters and accuracy of estimated breeding values in honey bees

2019 ◽  
Vol 51 (1) ◽  
Author(s):  
Evert W. Brascamp ◽  
Piter Bijma
Keyword(s):  
Honey Bees ◽  
Variance Components ◽  
Genetic Parameters ◽  
Additive Genetic Variance ◽  
Breeding Value ◽  
Phenotypic Variance ◽  
Breeding Values ◽  
Estimated Breeding Values ◽  
Additive Genetic Relationship ◽  
The Relationship

Abstract Background In honey bees, observations are usually made on colonies. The phenotype of a colony is affected by the average breeding value for the worker effect of the thousands of workers in the colony (the worker group) and by the breeding value for the queen effect of the queen of the colony. Because the worker group consists of multiple individuals, interpretation of the variance components and heritabilities of phenotypes observed on the colony and of the accuracy of selection is not straightforward. The additive genetic variance among worker groups depends on the additive genetic relationship between the drone-producing queens (DPQ) that produce the drones that mate with the queen. Results Here, we clarify how the relatedness between DPQ affects phenotypic variance, heritability and accuracy of the estimated breeding values of replacement queens. Second, we use simulation to investigate the effect of assumptions about the relatedness between DPQ in the base population on estimates of genetic parameters. Relatedness between DPQ in the base generation may differ considerably between populations because of their history. Conclusions Our results show that estimates of (co)variance components and derived genetic parameters were seriously biased (25% too high or too low) when assumptions on the relationship between DPQ in the statistical analysis did not agree with reality.

scholarly journals Weaning results of beef Hungarian Fleckvieh calves 2. Genetic parameters, breeding values

2010 ◽  
Vol 53 (1) ◽  
pp. 26-36 ◽  
Author(s):  
S. Bene ◽  
I. Füller ◽  
A. Fördős ◽  
F. Szabó
Keyword(s):  
Genetic Parameters ◽  
Correlation Coefficients ◽  
Breeding Value ◽  
Phenotypic Variance ◽  
Weaning Weight ◽  
Breeding Values ◽  
Estimated Breeding Values ◽  
Genetic Value ◽  
Maternal Heritability ◽  
Daily Gain

Abstract. Weaning weight, preweaning daily gain and 205-day weight of Hungarian Fleckvieh calves (n=8 929, bulls =4 539, heifers =4 390) born from 232 sires between 1980 and 2003 were examined. Variance, covariance components and heritability values and correlation coefficients were estimated. The effect of the maternal permanent environment on genetic parameters and breeding values were examined. Two animal models were used for breeding value estimation. The direct heritability (hd2) of weaning weight, preweaning daily gain and 205-day weight was between 0.37 and 0.42. The maternal heritability (hm2) of these traits was 0.06 and 0.07. The direct-maternal correlations (rdm) were medium and negative −0.52 and −0.74. Contribution of the maternal heritability and maternal permanent environment to phenotype is smaller than that of direct heritabilities (hm2+c2< hd2). The ratio of the variance of maternal permanent environment in the phenotypic variance (c2) changed from 3 to 6 %. Estimated breeding values changed whether the permanent environmental effect of dam wasn’t taken into consideration but the rank of the animals was not modified. The genetic value for weaning results of Hungarian Fleckvieh population has increased since 1997.

scholarly journals Genetic parameters of production and reproduetive traits in on a farm tested Danish Large White and Landrace swine in Greece

2000 ◽  
Vol 43 (3) ◽  
pp. 287-298
Author(s):  
J. Bizelis ◽  
A. Kominakis ◽  
E. Rogdakis ◽  
F. Georgadopoulou
Keyword(s):  
Maximum Likelihood ◽  
Genetic Correlation ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
Production Traits ◽  
Likelihood Methods ◽  
Large White ◽  
Reproduction Traits ◽  
Maximum Likelihood Methods ◽  
Genetic And Phenotypic Correlations

Abstract. Production and reproduetive traits in Danish Landrace (LD) and Large White (LW) swine were analysed by restricted maximum likelihood methods to obtain heritabilities as well as genetic and phenotypic correlations. Production traits were: age, backfat thickness (BT), muscle depth (MD) and the ratio BT/MD, adjusted to Standard bodyweight of 85 kg. Reproduction traits were: number of pigs born (NB) and number of pigs weaned (NW) per sow and parity. Heritabilities for age, BT, MD and BT/MD were 0.60, 0.44, 0.51 and 0.42 for LD and 0.36, 0.44, 0.37 and 0.45 for LW, respectively. Genetic correlations between age and BT were −0.22 in LD and – 0.44 in LW. The genetic correlation between age and MD was close to zero in both breeds. Genetic correlation between BT and MD were −0.36 and −0.25 in LD and LW, respectively. Heritabilities for NB were 0.25 in LD and 0.13 in LW while heritabilities for NW were close to zero in both breeds. Genetic correlation between NB and NW was 0.46 and 0.70 in LD and LW, respectively.

Multitrait and repeatability estimates of random effects on litter size in sheep

2002 ◽  
Vol 74 (2) ◽  
pp. 209-216 ◽  
Author(s):  
C. Hagger
Keyword(s):  
Litter Size ◽  
Random Effects ◽  
Genetic Gain ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
Parameter Estimates ◽  
Data Sets ◽  
Phenotypic Variance ◽  
The Third ◽  
Meat Sheep

AbstractFive data sets with records of first, second and third lambings of the White Alpine sheep (WAS1, WAS2), the Brown-Headed Meat sheep (BFS), the Black-Brown Mountain sheep (SBS) and the Valais Black-Nose sheep (SNS) of Switzerland were used to estimate phenotypic and genetic parameters for litter size using a multitrait and a repeatability model by the REML method. The sets contained litter information from 26 274, 25 165, 18 913, 14 953 and 21 726 ewes, respectively. Average numbers of litters per ewe were between 2·09 and 2·31. Average litter sizes at birth were between 1·36 and 1·57 lambs in first, between 1·52 and 1·75 in second and, between 1·56 and 1·86 in third parities. Multitrait estimates of heritability for size of first litters were 0·164, 0·157, 0·117, 0·223 and 0·116 for the WAS1, WAS2, BFS, SBS and SNS data, respectively. The corresponding estimates were 0·176, 0·165, 0·140, 0·208 and 0·134 for second and, 0·141, 0·155, 0·121, 0·145 and 0·107 for third litters. The systematic increase in phenotypic variances from first to third litter within data sets favoured the multivariate over the repeatability approach. Genetic correlations between size of the first three litters were, with one exception, above 0·927. Random flock ✕ year and sire of litter effects contributed between 2·2% and 13·2% and between 0·7% and 4·7% to the phenotypic variance of the traits, respectively. Residuals contributed between 70·6% and 84·2% to this parameter, estimates for the third litter were always highest. Heritability estimates from the repeatability model were smaller than the smallest multivariate estimates. Expected genetic gain in litter size from selection on the multitrait model was equal to the achieved response from the repeatability approach.

Repeatability and bias of estimated breeding values for dairy bulls and bull dams calculated from animal model evaluations

1993 ◽  
Vol 57 (2) ◽  
pp. 175-182 ◽  
Author(s):  
P. Uimari ◽  
E. A. Mäntysaari
Keyword(s):  
Animal Model ◽  
Dairy Cow ◽  
Relative Weight ◽  
Breeding Value ◽  
Potential Bias ◽  
Data Set ◽  
Breeding Values ◽  
Dairy Bulls ◽  
Estimated Breeding Values ◽  
Genetic Standard Deviation

AbstractAn animal model and an approximative method for calculating repeatabilities of estimated breeding values are used in Finnish dairy cow evaluation. Changes in estimated breeding values over time as daughters accumulate were studied. Special emphasis was given to the accuracy and potential bias in the pedigree indices of young sires. The data set used was the same as in the national evaluation and the traits investigated were protein yield and somatic cell count. The average repeatability in evaluation of bulls without daughters was 0·37. The empirical repeatability defined as a squared correlation between the pedigree index and the final sire proof was only 0·15. The reduction in the repeatability was attributed to the selection on pedigree index. The upward bias observed in pedigree indices was 5 kg (approx. 0·3 of genetic standard deviation). The bias was caused by the overestimation of bull dams' breeding value. Also the proofs of bull sires increased after the second crop of daughters. The correlation between the evaluations of the same sire calculated from two separate equal size daughter groups was 0·91 when the bull had 10 to 50 daughters and 0·87 with over 100 daughters. This illustrates how the relative weight of the pedigree decreases while more progeny information is accumulated in the evaluation.

scholarly journals Genetic Parameters, Breeding Values and Genetic Trends for Some Productive and Reproductive Traits of Holstein Cows in Egypt

2019 ◽  
Vol 45 (1) ◽  
pp. 142-154
Author(s):  
Tamer M. Abdel-Hamid ◽  
Khairy M. El-Bayoumi ◽  
Mahmoud S. El-Tarabany ◽  
Wafaa R.I.A. Sherief
Keyword(s):  
Genetic Parameters ◽  
Reproductive Traits ◽  
Holstein Cows ◽  
Breeding Values ◽  
Genetic Trends

scholarly journals Genetic parameters and trends for reproductive traits in Blanco Orejinegro cattle from Colombia

2021 ◽  
Vol 42 (4) ◽  
pp. 2523-2538
Author(s):  
Sindy Liliana Caivio-Nasner ◽  
◽  
Albeiro López-Herrera ◽  
Luis Gabriel González-Herrera ◽  
Juan Carlos Rincón Flórez ◽  
...  
Keyword(s):  
Inbreeding Depression ◽  
Genetic Parameters ◽  
Environmental Influence ◽  
Cattle Breed ◽  
Heritability Estimate ◽  
Reproductive Traits ◽  
Genetic Trend ◽  
Genetic Progress ◽  
Estimated Breeding Values ◽  
Genetic Trends

The Colombian creole cattle breed Blanco Orejinegro (BON) is an important zoogenetic resource, but there is little knowledge about the genetic parameters and trends of its reproductive traits. Therefore, the aim of this study was to estimate parameters for the reproductive traits calving interval (CI), age at first calving (AFC), gestation duration (GD) and genetic trends for CI in the BON breed. Genealogy information from 7,799 animals was used, and employing the MTDFREML program, the components of the variance, heritability (h2), repeatability (rep), and estimated breeding values (EBV) for CI (n=3308), AFC (n=729), and GD (n=306) were estimated, in addition to the inbreeding coefficient (F) of the population. Genetic trends were established through linear regression using R software. Finally, the animals were classified as inbred (F > 0) and noninbred (F=0), and the effect of inbreeding on reproductive performance was established through a generalized linear model using the R program. An average F value of 4.41%±0.06 was observed. The h2 for CI was 0.11±0.03 with a rep of 0.15±0.04; for AFC, h2 was 0.00±0.05; and for GD, h2 was 0.00±0.08. The genetic trend for CI was -0.01 days/year. Finally, for CI, inbreeding depression was evident; this trait increased when inbreeding increased. These results indicate an important environmental influence on reproductive traits. The heritability estimate for CI suggests that little genetic progress could be achieved through selection. The evidence of inbreeding depression raises the need to control inbreeding to conserve this genetic resource.

scholarly journals Genetic and Genomic Analyses of Service Sire Effect on Female Reproductive Traits in Holstein Cattle

2021 ◽  
Vol 12 ◽  
Author(s):  
Ziwei Chen ◽  
Luiz F. Brito ◽  
Hanpeng Luo ◽  
Rui Shi ◽  
Yao Chang ◽  
...  
Keyword(s):  
Dairy Cattle ◽  
Reproductive Performance ◽  
Reproductive Traits ◽  
Genetic Effects ◽  
Holstein Cattle ◽  
Phenotypic Variance ◽  
Breeding Values ◽  
Female Reproductive Traits ◽  
Success Traits ◽  
Calving Traits

Fertility and reproductive performance are key drivers of dairy farm profitability. Hence, reproduction traits have been included in a large majority of worldwide dairy cattle selection indexes. The reproductive traits are lowly heritable but can be improved through direct genetic selection. However, most scientific studies and dairy cattle breeding programs have focused solely on the genetic effects of the dam (GED) on reproductive performance and, therefore, ignored the contribution of the service sire in the phenotypic outcomes. This study aimed to investigate the service sire effects on female reproductive traits in Holstein cattle from a genomic perspective. Genetic parameter estimation and genome-wide association studies (GWAS) were performed for the genetic effect of service sire (GESS) on conception rate (CR), 56-day non-return rate (NRR56), calving ease (CE), stillbirth (SB), and gestation length (GL). Our findings indicate that the additive genetic effects of both sire and dam contribute to the phenotypic variance of reproductive traits measured in females (0.0196 vs. 0.0109, 0.0237 vs. 0.0133, 0.0040 vs. 0.0289, 0.0782 vs. 0.0083, and 0.1024 vs. 0.1020 for GESS and GED heritability estimates for CR, NRR56, CE, SB, and GL, respectively), and these two genetic effects are positively correlated for SB (0.1394) and GL (0.7871). Interestingly, the breeding values for GESS on insemination success traits (CR and NRR56) are unfavorably and significantly correlated with some production, health, and type breeding values (ranging from −0.449 to 0.274), while the GESS values on calving traits (CE, SB, and GL) are usually favorably associated with those traits (ranging from −0.493 to 0.313). One hundred sixty-two significant single-nucleotide polymorphisms (SNPs) and their surrounding protein-coding genes were identified as significantly associated with GESS and GED, respectively. Six genes overlapped between GESS and GED for calving traits and 10 genes overlapped between GESS for success traits and calving traits. Our findings indicate the importance of considering the GESS when genetically evaluating the female reproductive traits in Holstein cattle.

scholarly journals Bias in genetic evaluation using random regression test-day model

2008 ◽  
Vol 16 (2) ◽  
pp. 103 ◽  
Author(s):  
M. LIDAUER ◽  
E.A. MÄNTYSAARI
Keyword(s):  
Animal Model ◽  
Evaluation Model ◽  
Protein Yield ◽  
Random Regression ◽  
Data Sets ◽  
Heterogeneous Variance ◽  
Breeding Values ◽  
Regression Test ◽  
Estimated Breeding Values ◽  
Reduced Data

The effect of an upgraded Finnish evaluation model on bias in estimated breeding values for protein yield was investigated. Evaluations based on repeatability animal model and on random regression test-day model without and with heterogeneous variance adjustment were compared. Comparisons were based on the average difference between pedigree indices and the future estimated breeding values, based on own or on daughter performance records. This was defined as empirical bias. The pedigree indices were computed from reduced data sets where four years of the most recent data were excluded. Results showed an upward bias in the protein yield pedigree indices for Ayrshire young sires of 2.2 kg, 2.5 kg and 1.8 kg from the repeatability animal model, random regression test-day model and random regression test-day model with heterogeneous variance adjustment, respectively. Pedigree indices for daughters of young sires were upward biased, whereas pedigree indices for daughters of proven sires were slightly underestimated when heterogeneous variance was not accounted. Inclusion of test-day yields from the fourth lactation onwards increased the bias. Moving from repeatability animal model to random regression test-day model did not reduce the bias, whereas adjustment of heterogeneous variance reduced bias.;

scholarly journals Relationship between longevity and selected production, reproduction and type traits

2011 ◽  
Vol 50 (No. 1) ◽  
pp. 1-6 ◽  
Author(s):  
P. Strapák ◽  
J. Candrák ◽  
J. Aumann
Keyword(s):  
Negative Correlation ◽  
Positive Relationship ◽  
Reproductive Traits ◽  
Milk Traits ◽  
Breeding Values ◽  
Positive Correlation ◽  
Dairy Traits ◽  
Type Traits ◽  
Estimated Breeding Values

The correlations between longevity, functional longevity, stayability and selected milk, reproductive and type traits were estimated; it was done on the basis of estimated breeding values for longevity, functional longevity, dairy traits, reproductive traits and stayability rates at the age of 60, 72, 84, and 96 months. The correlation between breeding values for longevity and functional longevity was 0.69. The correlations between longevity and stayability at 60, 72, 84, and 96 months of age were around 0.75 (from 0.73 to 0.76) whereas the correlation with stayability at 48 months was considerably lower (0.64). The breeding values for dairy traits showed a positive relationship with longevity (from 0.37 to 0.46) and a slightly negative correlation with breeding values for functional longevity (from &ndash;0.10 to &ndash;0.20). A low relationship was found between longevity and reproductive traits. Between the type traits and longevity traits only the conformation score for the form (0.18) and for the udder showed a positive correlation (0.24). The correlation between the form and functional longevity remained approximately on the same level whereas the correlation with the main udder score decreased to 0.08, which indicated a positive relationship between milk traits and udder scores. &nbsp;

Sign in / Sign up

Export Citation Format

Share Document